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Chapter 1
INTRODUCTION
The MS-6339 ATX TH1 mainboard is a high-performance computer
mainboard based on Intel® 82850 chipset. The MS-6339 is optimized to
support the Intel® Pentium® 4 processor for high-end business/personal
desktop markets.
The Intel® Tehama chipset supports 64B cache line size and a 32-bit
host addressing, allowing the processor to access the entire 4GB of the
chipsets memory address space. It also provides 4x AGP data transfers and
2x/4x AGP Fast Writes capability. Including a 3.2GBs memory bus bandwidth
and 3.2GBs system bus bandwidth.
The Intel® Tehama chipset features a dual channel Direct RDRAM
memory operating in lock-step using RSL technology. It is a highly-flexible
chipset which is designed to extend the basic graphics/multimedia PC
platform up to the mainstream performance desktop platform.
The Intel® 82801BA (ICH2) chipset is a highly integrated
multifunctional I/O Controller Hub that provides the interface to the PCI Bus
and integrates many of the functions needed in todays PC platforms. It
communicates with the host controller over a dedicated hub interface and
provides added flexibility in designing cost-effective system solutions.
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Mainboard Features
CPU
! Support Intel® Pentium® 4 processor
! Supports 1.4GHz or faster
Chipset
! Intel® Tehama chipset
- Up to 2GB maximum memory (RAMBUS).
- AGP Pro interface with 4x SBA/Data Transfer
! Intel® ICH2 chipset
- AC97 Controller Integrated
- 2 Full IDE channels, up to ATA100
- Low pin count interface for SIO
- 4 USB Ports
Main Memory
! Supports four 184-pin gold-lead RIMM sockets
! Supports a maximum memory size of 2GB
Slots
! One AGP (Accelerated Graphics Port) Pro slot
- support up to 4x mode
! One CNR (Communication Network Riser) slot
! Five 32-bit/33MHz Master PCI Bus slots
! Supports 3.3v/5v PCI bus Interface
On-Board IDE
! An IDE controller on the Intel® ICH2 Chipset provides IDE HDD/CD-
ROM with PIO, Bus Master and Ultra DMA 100 operation modes
! Can connect up to four IDE devices
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Integrated Super I/O Controller
! Winbond W83627HF-AW I/O controller
- 1 floppy port supports 2 FDD with 360K, 720K, 1.2M, 1.44M and
2.88Mbytes
- 2 serial port (COM A + COM B)
- 1 parallel port supports SPP/EPP/ECP mode
- 1 IrDA connector for SIR
Audio
! ICH2 chip integrated
! Creative CT5880 (optional)
- 64 Voice WaveTable Synthesizer
- Sound Library of over 4000 different sounds
- Support SPDIF (AC3)
- Support Microsoft Direct Sound, Direct Sound 3D, Direct Music,
and A3DAPI
BIOS
! The mainboard BIOS provides Plug & Play BIOS which detects the
peripheral devices and expansion cards of the board automatically.
! IDE drive auto configure, Advanced Power Management (APM) 1.2,
ACPI 1.0, DMI 2.0, ECC/Parity support.
Dimension
! ATX Form Factor : 12inches(L) x 9.6inches(W) x 6 layers PCB
Mounting
! 12 mounting holes
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Mainboard Layout
PCI SLOT 2
PCI SLOT 1
AT X
Power Supply
Intel
82850
Chipset
Socket 423
RIMM 2
Top: mouse
Bottom:
keyboard
Top: Port 2
USB
IDE2
Bottom:
Port 1
IDE1
FDD
Int el
FW82801BA
JMDM1
J16
JGL1
J8
J9
CPUFAN
SYSFAN
Top: LPT
Bottom:
COM A
COM B
Top: Midi/
Game Port
Bottom:
Line-Out
Line-In
Mic
J10
JP1
BIOS
AGP Slot
BATT
+
RIMM 1
JWR1
CNR
PSFAN
MS-6339 ATX TH1 Mainboard
PCI SLOT 3
PCI SLOT 4
PCI SLOT 5
JFP1
JWOL1
JBAT1
J15
JUSB1
JRMS1
JWR3
RIMM 4
RIMM 3
J5
J7
JGS1
J18
J17
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Chapter 2
HARDWARE INSTALLATION
Central Processing Unit: CPU
The mainboard operates with Intel® Pentium® 4 processor. The mainboard
uses a CPU socket called Socket 423 for easy CPU installation. The CPU
should always have a Heat Sink and a cooling fan attached to prevent
overheating.
3. Press the lever down to
complete the installation.
2. Locate Pin 1 in the socket
and look for the white dot or
cut edge in the CPU. Match
Pin 1 with the white dot/cut
edge. Then, insert the CPU.
It should insert easily.
Open Lever
Pin 1
Sliding
Plate
White dot/
Cut edge
Close
Lever
1. Pull the lever sideways away
from the socket. Then, raise
the lever up to a 90-degree
angle.
Pin 1
••
••
• CPU Installation Procedures
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• CPU Core Speed Derivation Procedure
The mainboard CPU Bus Frequency can be set through BIOS setup.
If CPU Clock = 100MHz
Core/Bus ratio = 14
then CPU core speed = Host Clock x Core/Bus ratio
= 1.4GHz
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• Fan Power Connectors: CPUFAN/PSFAN/SYSFAN
These connectors support system cooling fan with + 12V. It supports three pin head connector. When connecting the wire to the
connector, always take note that the red wire is the positive and
should be connected to the +12V, the black wire is Ground and
should be connected to GND. If your mainboard has System Hardware Monitor chipset on-board, you must use a specially designed
fan with speed sensor to take advantage of this function.
For fans with fan speed sensor, every rotation of the fan will send out 2
pulses. System Hardware Monitor will count and report the fan rotation
speed.
Note: Always consult vendor for proper CPU cooling fan.
PSFAN
CPUFAN: Processor Fan
PSFAN: Power Supply Fan
SYSFAN: System Fan
CPUFAN
+12V
SENSOR
GND
+12V
GND
Sensor
SYSFAN
+12V
GND
Sensor
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Clear CMOS Jumper: JBAClear CMOS Jumper: JBA
Clear CMOS Jumper: JBAClear CMOS Jumper: JBA
Clear CMOS Jumper: JBA
T1T1
T1T1
T1
A battery must be used to retain the mainboard configuration in CMOS
RAM. Short 1-2 pins of JBAT1 to store the CMOS data.
Clear Data
Keep Data
1
1
3
3
Note: You can clear CMOS by shorting 2-3 pin, while the system is off.
Then, return to 1-2 pin position. Avoid clearing the CMOS while
the system is on, it will damage the mainboard. Always unplug
the power cord from the wall socket.
2
2
1
3
JBAT1
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Memory InstallationMemory Installation
Memory InstallationMemory Installation
Memory Installation
• Memory Bank Configuration
The mainboard supports a maximum memory size of 2G. It provides four
184-pin RIMMs sockets. It supports 64 MB to 512 Mbytes RIMM memory
module.
RIMM
1(Bank0+ Bank1)
RIMM
2(Bank2+ Bank3)
RIM
M
3(Bank4+ Bank5)
RIMM4(Bank5+ Bank4)
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• Memory Installation Procedures
A. How to install a RIMM Module
1. The RIMM slot has 2 Notch Keys, so the RIMM memory module
can only fit in one direction.
2. Insert the RIMM memory module vertically into theRIMM slot.
Then push it in.
3. The plastic clip at the side of the RIMM slot will automatically
close.
NOTCH
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• Memory Population Rules
1. Support only RIMM.
2. To operate properly, make sure that the RIMM banks are using the same
type and equal size density memory.
3. Support FSB 100MHz: PC600/800 RIMM.
Note: PC700 will run at PC600 specification.
4. Support up to 32 Direct Rambus Device.
5. Support ECC Single bit Correction and Multiple bit error detection
(Setting in BIOS)
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Case Connector: JFP1
The Power Switch, Reset Switch, Power LED, Speaker, HDD LED and
Keylock (reserved) are all connected to the JFP1 connector block.
JFP1
Power
Switch
Power LED
+
Reset
Switch
HDD LED
+
Speaker
Buzzer
14
15
Keylock (Reserved)
Dual
Color
LED
Single
Color
LED
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Power Switch
Connect to a 2-pin push button switch. This switch has the same feature
with JRMS1.
Reset Switch
Reset switch is used to reboot the system rather than turning the power ON/
OFF. Avoid rebooting while the HDD LED is lit. You can connect the Reset
switch from the system case to this pin.
Power LED
The Power LED is lit while the system power is on. Connect the Power LED
from the system case to this pin. There are two types of LED that you can
use: 3-pin single color LED or 2-pin dual color LED (ACPI request).
a. 3 pin single color LED connect to pin 4, 5, & 6. This LED will lit
when the system is on.
b. 2 pin dual color LED connect to pin 5 & 6.
GREEN Color: Indicate the system is in full on mode.
ORANGE Color: Indicate the system is in suspend mode.
Speaker
Speaker from the system case is connected to this pin.
If on-board Buzzer is available:
Short pin 14-15: On-board Buzzer Enabled.
Open pin 14-15: On-board Buzzer Disabled.
HDD LED
HDD LED shows the activity of a hard disk drive. Avoid turning the power
off while the HDD led is lit. You can connect the HDD LED from the system
case to this pin.
Keylock (reserved)
Keylock allows you to disable the keyboard for security purposes. You can
connect the keylock to this pin.
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Floppy Disk Connector: FDD
The mainboard also provides a standard floppy disk connector FDD that
supports 360K, 720K, 1.2M, 1.44M and 2.88M floppy disk types. This
connector supports the provided floppy drive ribbon cables.
FDD
1
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Hard Disk Connectors: IDE1 & IDE2
The mainboard has a 32-bit Enhanced PCI IDE and Ultra DMA/66 Controller
that provides PIO mode 0~4, Bus Master, and Ultra DMA/33/66 function. It
has two HDD connectors IDE1 (primary) and IDE2 (secondary). You can
connect up to four hard disk drives, CD-ROM, 120MB Floppy (reserved for
future BIOS) and other devices to IDE1 and IDE2. These connectors
support the provided IDE hard disk cable.
IDE1(Primary IDE Connector)
The first hard drive should always be connected to IDE1. IDE1 can
connect a Master and a Slave drive. You must configure second hard
drive to Slave mode by setting the jumper accordingly.
IDE2 (Secondary IDE Connector)
IDE2 can also connect a Master and a Slave drive.
Primary IDE Connector
Secondary IDE Connector
1
1
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Power SupplyPower Supply
Power SupplyPower Supply
Power Supply
• ATX 20-pin Power Connector: JWR2
ATX 12V Power Connector: JWR1
These connectors support the power button on-board. Using the ATX
power supply, functions such as Modem Ring Wake-Up and Soft Power Off
are supported by this mainboard. These power connectors support instant
power on function which means that system will boot up instantly when the
power connector is inserted on the board. Refer to chapter 2-14 for pin
definition.
JWR2
10 1
20 11
1
JWR1
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• ATX 5V/3V Power Connector: JWR3 (optional)
This mainboard supports an optional 5V/3V power supply connector. Refer
to chapter 2-14 for pin definition.
1
JWR3
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11 3.3V
12 -12V
13 GND
14 PS_ON
15 GND
16 GND
17 GND
18 -5V
19 +5V
20 +5V
1 3.3V
2 3.3V
3 GND
45V
5 GND
65V
7 GND
8 PW_OK
9 5V_SB
10 12V
Warning: Since the mainboard has the instant power on function, make
sure that all components are installed properly before inserting the power
connector to ensure that no damage will be done.
PIN DEFINITION TABLEPIN DEFINITION TABLE
PIN DEFINITION TABLEPIN DEFINITION TABLE
PIN DEFINITION TABLE
PIN SIGNAL
1 GND
2 GND
3 12V
4 12V
PIN SIGNAL PIN SIGNAL
PIN SIGNAL
1 GND
2 GND
3 GND
PIN SIGNAL
4 3.3V
5 3.3V
65V
Pin definition for JWR2
10 1
20 11
Pin definition for JWR1
1
Pin definition for JWR3
1
3
2
4
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• Remote Power On/Off Switch: JRMS1
Connect to a 2-pin push button switch. During OFF state, press once and
the system turns on. During ON stage, push once and the system goes to
sleep mode: pushing it more than 4 seconds will change its status from ON
to OFF. If you want to change the setup, you could go to the BIOS Power
Management Setup. This is only used for ATX type power supply.
JRMS1
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IrDA Infrared Module Connector: J5IrDA Infrared Module Connector: J5
IrDA Infrared Module Connector: J5IrDA Infrared Module Connector: J5
IrDA Infrared Module Connector: J5
The mainboard provides one infrared (IR) connector for IR modules. This
connector is for optional wireless transmitting and receiving infrared module.
You must configure the setting through the BIOS setup to use the IR
function.
J5
1 10
5 9
1 VCC 6 NC
2NC 7NC
3IRRX85VSB
4 GND 9 CIRRX
5IRTX10NC
Pin Signal Pin Signal
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Serial Port Connectors: COM A and COM BSerial Port Connectors: COM A and COM B
Serial Port Connectors: COM A and COM BSerial Port Connectors: COM A and COM B
Serial Port Connectors: COM A and COM B
The mainboard provides two 9-pin male DIN connectors for serial port COM
A & COM B. These port are 16550A high speed communication port that
send/receive 16 bytes FIFOs. You can attach a mouse or a modem cable
directly into this connector.
PIN DEFINITION
1 2 3 4 5
6 7 8 9
COM A
Serial Port (9-pin Male)
COM B
PIN SIGNAL
1 DCD (Data Carry Detect)
2 SIN (Serial In or Receive Data)
3 SOUT (Serial Out or Transmit Data)
4 DTR (Data Terminal Ready)
5 GND
6 DSR (Data Set Ready)
7 RTS (Request To Send)
8 CTS (Clear To Send)
9 RI (Ring Indicate)
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Parallel Port Connector: LPT1Parallel Port Connector: LPT1
Parallel Port Connector: LPT1Parallel Port Connector: LPT1
Parallel Port Connector: LPT1
The mainboard provides a 25 pin female centronic connector for LPT. A
parallel port is a standard printer port that also supports Enhanced Parallel
Port (EPP) and Extended capabilities Parallel Port (ECP). See connector and
pin definition below:
PIN SIGNAL PIN SIGNAL
1 STROBE 14 AUTO FEED#
2 DATA0 15 ERR#
3 DATA1 16 INIT#
4 DATA2 17 SLIN#
5 DATA3 18 GND
6 DATA4 19 GND
7 DATA5 20 GND
8 DATA6 21 GND
9 DATA7 22 GND
10 ACK# 23 GND
11 BUSY 24 GND
12 PE 25 GND
13 SELECT
PIN DEFINITION
LPT 1
13
Parallel Port (25-pin Female)
1
25
14
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Mouse Connector: JKBMS1Mouse Connector: JKBMS1
Mouse Connector: JKBMS1Mouse Connector: JKBMS1
Mouse Connector: JKBMS1
The mainboard provides a standard PS/2® mouse mini DIN connector for
attaching a PS/2® mouse. You can plug a PS/2® mouse directly into this
connector. The connector location and pin definition are shown below:
Keyboard Connector: JKBMS1
The mainboard provides a standard PS/2® keyboard mini DIN connector for
attaching a keyboard. You can plug a keyboard cable directly to this
connector.
PS/2 Mouse (6-pin Female)
PS/2 Keyboard (6-pin Female)
Pin1
Mouse DATA
Pin6
NC
Pin2
NC
Pin4
VCC
Pin3
GND
Pin5
Mouse Clock
Pin1
KBD DATA
Pin6
NC
Pin2
NC
Pin3
GND
Pin5
KBD Clock
Pin4
VCC
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Audio Port Connectors
Line Out is a connector for Speakers or Headphones. Line In is used for
external CD player, Tape player, or other audio devices. Mic is a connector
for the microphones.
Line Out
Line In
Mic
1/8 Stereo Audio Connectors
Joystick/Midi Connectors
You can connect a joystick or game pad to this connector.
Joystick/MIDI
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USB Connectors
The mainboard provides a UHCI (Universal Host Controller Interface)
Universal Serial Bus root for attaching USB devices like: keyboard, mouse
and other USB devices. You can plug the USB device directly to this
connector.
USB Port 2
USB Port 1
PIN SIGNAL
1 VCC
2 -Data
3 +Data
4GND
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2-22
WW
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-Up on LAN Connector: JWOL1-Up on LAN Connector: JWOL1
-Up on LAN Connector: JWOL1-Up on LAN Connector: JWOL1
-Up on LAN Connector: JWOL1
The JWOL1 connector is for used with LAN add-on cards that supports
Wake Up on LAN function. To use this function, set the Wake-Up on
LAN to enable at the BIOS Power Management Setup.
PIN SIGNAL
1 5VSB
2GND
3 MP_WAKEUP
Note: LAN wake-up signal is active high.
Note: To be able to use this function, you need a power supply that
provide enough power for this feature. (Power supply with 750mA
5V Stand-by)
JWOL1
3
1
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2-23
Modem WModem W
Modem WModem W
Modem W
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e Up Connector: JMDM1e Up Connector: JMDM1
e Up Connector: JMDM1e Up Connector: JMDM1
e Up Connector: JMDM1
The JMDM1 connector is for used with Modem add-on card that supports
the Modem Wake Up function.
Note: Modem wake-up signal is active low.
PIN SIGNAL
1NC
2GND
3 MDM_WAKEUP
4NC
5 5VSB
Note: To be able to use this function, you need a power supply that
provide enough power for this feature. (Power supply with
750mA 5V Stand-by)
JMDM1
1
5
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Power Saving LED Connector: JGL1Power Saving LED Connector: JGL1
Power Saving LED Connector: JGL1Power Saving LED Connector: JGL1
Power Saving LED Connector: JGL1
JGL1 can be connected with two-color LED. There are two types of LED that
you can use: 3-pin LED or 2-pin LED (ACPI request). When the 2-pin LED is
connected to JGL1, the light will turn green, when system is On. During
sleep mode, the 2-pin LED will change color from Green to Orange. For 3-pin
LED, when LED is connected to JGL1, this will light when the system is On
and blinks when it is in suspend/sleep mode.
JGL1
+
1
3
1
3
Green Color
Orange
Color
1
3
Green Color
Orange
Color
1-2 Single Color 1-2 Dual Color
1-3 Blink
3-pin LED 2-pin LED
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Power Saving Switch Connector: JGS1Power Saving Switch Connector: JGS1
Power Saving Switch Connector: JGS1Power Saving Switch Connector: JGS1
Power Saving Switch Connector: JGS1
Attach a power saving switch to JGS1. When the switch is pressed, the
system immediately goes into suspend mode. Press any key and the system
wakes up.
JGS1
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CDCD
CDCD
CD
-In Connector: J8-In Connector: J8
-In Connector: J8-In Connector: J8
-In Connector: J8
This connector is for CD-ROM audio connector.
J8
L
GND
R