INFICON CMS5000 User Manual

OPERATING MANUAL
CMS5000 (shown in water sampling configuration)
CMS5000
Monitoring System
IPN 074-508-P1C
www.inficon.com reachus@inficon.com
Due to our continuing program of product improvements, specifications are subject to change without notice.
TM
OPERATING MANUAL
CMS5000
Monitoring Syst
IPN 074-508-P1C
em

Trademarks

The trademarks of the products mentioned in this manual are held by the companies that produce them.
INFICON® is a registered trademark of INFICON.
SWAGELOK® is a registered trademark of Swagelok Co.
Tygon® is a registered trademark of Saint-Gobain Performance Plastics.
Teflon® and Tedlar® are registered trademarks of Dupont.
PEEK™ is a trademark of Victrex plc.
Fischer Connectors® is a registered trademark of Fischer Connectors SA.
All other brand and product names are trademarks or registered trademarks of their respective companies.

Disclaimer

The information contained in this manual is believed to be accurate and reliable. However, INFICON assumes no responsibility for its use and shall not be liable for any special, incidental, or consequential damages related to the use of this product.
Due to our continuous improvement program, specifications are subject to change without notice.
While photos are believed to be accurate and reliable, slight variations in equipment or software may occur.

Copyright

©2009 All rights reserved. Reproduction or adaptation of any part of this document without permission is unlawful.

Warranty

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INFICON warrants that the products sold by it are delivered free from any defect in materials, workmanship and construction, and meet the products' specifications set forth by INFICON.
INFICON warrants the products for one (1) year from the date of shipping invoice of the products to the customer. The warranty excludes carrier gas, GC columns, concentrator tubes, and all other items deemed by INFICON as consumables. In the event the customer finds any defective products which do not meet the aforesaid warranty, it shall give notice to that effect to INFICON. The customer will return defective systems, accessories and parts to be repaired to INFICON or INFICON contracted suppliers after obtaining a Return Material Authorization (RMA) from INFICON Service Department.
INFICON liability under this warranty is limited to such products as are returned, transportation prepaid, to INFICON plant no later than thirty (30) days after the expiration of the warranty coverage and are found by INFICON examination to have failed because of defective workmanship. At INFICON election, it may either repair and return the product, or furnish a replacement product, with transportation paid by INFICON in either case.
This warranty is made and accepted in lieu of all other warranties, express or implied, whether of merchantability or of fitness for a particular purpose or otherwise, as buyer's exclusive remedy for any defects in the product sold hereunder. All other obligations and liabilities of INFICON, whether in contract or tort (including negligence) or otherwise, are expressly excluded. In no event shall INFICON be liable for any costs, expenses or damages, whether direct or indirect, on any claim of defective product, in excess of the price paid by the buyer for the products plus return transportation charges prepaid.
No warranty is made by INFICON for any INFICON product which has been installed, used or operated contrary to INFICON written instruction manual or which has been subject to misuse, negligence or accident, or has been repaired or altered by anyone other than INFICON or which has been used in a manner or for a purpose for which the product was not designed.
Chapter 1
1.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .1-1
1.2 Gas Chromatograph . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1-2
1.3 Micro Argon Ionization Detector (MAID). . . . . . . . . . . . . . . . . . . . . . . . . . . . 1-2
1.4 Radioactive Source . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1-3
1.5 Definition of Note, Hint, Danger, Warning
Chapter 2
2.1 Gas Chromatograph Specifications . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2-1
2.2 MAID - Micro Argon Ionization Detector . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2-1
2.3 Communication. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .2-1
2.4 Physical Operating Requirements . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2-2
2.5 Analysis and Protocols . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2-2
CMS5000 Operating Manual

Table Of Contents

Introduction
and Caution Paragraphs. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .1-4
Specifications
Chapter 3
System Setup
3.1 CMS5000 Feature Options. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .3-1
3.1.1 Analytical Unit. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .3-1
3.1.2 Sampling Source . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-1
3.1.3 Integration. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .3-1
3.1.4 Ship Kits . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-1
3.1.5 Laptop PC with CMS IQ Software . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-1
3.2 CMS5000 Ship Kit Contents. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .3-2
3.3 CMS5000 Diagram . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-2
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3.4 Mounting Instructions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-3
3.5 Water Monitoring Assembly Instructions . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-5
3.6 Attaching the Water Sampling Vessel . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-7
3.7 Connecting the Water Supply. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .3-8
3.8 Air Monitoring Assembly Instructions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-8
3.8.1 Ambient Air Sampling. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-9
3.8.2 Air Line Sampling . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-10
3.9 Connecting the Argon Supply. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-12
3.10 Connecting the Power Supply . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-13
3.11 Communication Configuration . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3-14
3.11.1 Ethernet . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .3-14
3.11.2 I/O. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .3-14
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Chapter 4
4.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4-1
4.1.1 Setting Up Laptop Communications. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4-1
4.1.2 Configuring the CMS5000 for Laptop Communications. . . . . . . . . . . . . . . . 4-4
Chapter 5
5.1 Software Setup. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-1
5.2 Calibrating the Check Standard . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-1
5.3 Calibrating the Water or Air Purge Methods. . . . . . . . . . . . . . . . . . . . . . . . . 5-9
5.4 FTP Connection . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-10
5.5 System Integration . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-20
5.6 Setting Startup Methods. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-20
5.7 Input Methods. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-23
5.8 Method Sequence . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5-25
CMS5000 Operating Manual
Setting Up Laptop Communication
Software Setup
Chapter 6
6.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-1
6.2 SYS Option. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-1
6.3 TIME Option . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-2
6.4 NET Option. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-2
6.5 STAT Option. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-3
6.6 FIRM Option . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6-3
Chapter 7
7.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7-1
7.2 Default Methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7-1
7.3 System Calibration Standard . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7-1
7.4 Operating the CMS5000 using the Front Panel . . . . . . . . . . . . . . . . . . . . . . 7-1
Chapter 8
8.1 Review Data . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8-1
Status Button
Operation
IPN 074-508-P1C
Review Data
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Chapter 9
System Option
9.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .9-1
9.2 System Option . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9-1
9.3 Set Date, Time and Time Zone . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9-3
9.3.1 Set Network Info . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9-7
9.3.2 Set Language . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9-10
Chapter 10
Exit Option
10.1 Exit Options . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 10-1
10.2 Accessing Exit Options. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .10-1
10.3 Restart System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .10-3
10.4 Reboot System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .10-4
10.5 Return to Main Menu . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .10-4
Chapter 11
CMS IQ System Setup
11.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-1
11.2 System Setup . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-1
11.2.1 System Setup Menu . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-2
11.2.2 File Menu . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-2
11.2.2.1 Generate Trend Report . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-3
11.2.3 Functions Menu . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-7
11.2.4 System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-8
11.2.4.1 Port Settings Tab . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-9
11.2.4.2 Display Tab. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-10
11.2.4.3 Miscellaneous Tab . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-11
11.2.5 Tools Menu. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-18
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11.2.5.1 Set Access Level . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-18
11.2.5.1.1 Changing Access Levels . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-19
11.2.5.1.2 Setting or Changing the Access Level Password. . . . . . . . . . . . . . . . . . . 11-20
11.2.6 View Menu . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-21
11.2.7 Window Menu. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-22
11.2.8 Help Menu . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-23
11.3 System Setup Icons . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-23
11.4 Safety DB . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-26
11.5 Manage Files . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-30
11.6 Status Icon . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-34
11.6.1 Status Properties . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .11-35
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CMS5000 Operating Manual
11.6.2 CMS5000 Time Zone . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-36
11.6.3 CMS5000 Information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-40
11.6.4 Pressure Flows and Temperatures . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-41
11.6.5 Input/Output . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-44
11.6.6 Data Settings . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-45
11.6.7 Functions . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-48
11.6.8 Parameters. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-49
11.7 Front Panel Display Icon . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-54
11.8 CMS5000 Sensor Status Icon . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-55
11.8.1 Update CMS5000 Software . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-55
11.8.2 Bring Online . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-56
11.8.2.1 Communication Messages . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-56
11.8.3 Disconnect . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11-56
Chapter 12
Data Review Screen
12.1 Introduction to Data Review . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-1
12.2 Accessing the Data Review Feature . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-1
12.3 Menus. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-3
12.3.1 Data Review Menu . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-3
12.4 Data Review Toolbar . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-4
12.5 Data File Information Window . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-5
12.6 Reports. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-6
12.6.1 Access Reports . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-6
12.6.2 Summary Reports . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-7
12.6.3 Quantitative Reports. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-7
12.7 Chromatogram Window Options . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-9
12.7.1 Manual Scale . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-9
12.7.2 View All Data . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-12
12.7.3 View Temperature Profile. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-13
12.7.4 Change Plot Color . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-14
12.7.5 Peaks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-15
12.7.5.1 Search for Peaks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-15
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12.7.5.1.1 Add Peaks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-16
12.7.5.1.2 Peak Search Parameters . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-17
12.7.5.1.3 Redo Peak Search . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-17
12.7.5.1.4 Report Preview. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-17
12.7.5.2 Show/Update Current Peaks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-18
12.7.5.3 Edit Base Points . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-18
12.7.5.4 Clear the Peaks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-20
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12.7.5.5 Label the Peaks . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .12-21
12.7.5.6 Change Search Parameters . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .12-21
12.7.5.7 Previous Search Results . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .12-22
12.7.6 Control Panel . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .12-24
12.7.7 Properties . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-25
12.8 How to Access the Scan Cursor. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .12-25
12.9 Using the Zoom Function . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-26
12.10 Range Tool. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12-31
12.10.1 Selecting a Background . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .12-34
Chapter 13
Run Method
13.1 Run Method Procedure . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 13-1
Chapter 14
Chromatogram Overlay
14.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .14-1
14.2 Chromatogram Overlay . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .14-1
14.3 Chromatogram Subtract . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 14-4
Chapter 15
Method Editor
15.1 The Method Editor . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-1
15.2 Accessing Method Editor . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-3
15.3 Description Page . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-3
15.4 Startup . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-5
15.4.1 CMS5000 Temperatures (C) . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-6
15.4.2 Method Type Selection. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-6
15.5 Inlet. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-6
IPN 074-508-P1C
15.5.1 Inlet States . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-7
15.5.2 GC Temperature Profile . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-11
15.5.3 Scan Events . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-12
15.6 Search Page. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-13
15.6.1 Setting Up a Quantitative Search . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-14
15.7 Data Page. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-16
15.7.1 Data File Information . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-16
15.7.2 Date and Time Appendix . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-17
15.7.3 Use Default Directory . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-19
15.7.4 Data Display . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-19
15.8 Summary Page. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .15-20
15.9 Saving a Method. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15-21
TOC - 5
Chapter 16
16.1 Introduction To Quantitative Analysis. . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-1
16.2 Using the Calibrate Function . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-2
16.3 Glossary of Terms in the Calibrate Window . . . . . . . . . . . . . . . . . . . . . . . 16-17
16.3.1 Method . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-17
16.3.2 Data Files . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-18
16.3.3 Peak Search Section . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-19
16.3.4 Calibrate Options . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-19
16.3.5 Analytes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-19
16.3.6 View Reports . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-20
16.3.7 Calibrate Display . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16-21
Appendix A
A.1 Introduction. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .A-1
A.2 CMS5000API.H . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .A-1
CMS5000 Operating Manual
Creating Calibration Libraries
Ethernet Integration
TOC - 6
IPN 074-508-P1C

1.1 Introduction

WARNING
Partition Coefficient
VOC
water
VOC
gas
------------------------=
The CMS5000 Monitoring System provides online water or air monitoring for the detection and analysis of VOCs. The programmable sample collection system allows for on-site, rapid analysis of current air or water conditions without the need for pre-treatment or filtration.
CMS5000 Operating Manual
Chapter 1
Introduction
Due to U.S. Nuclear Regulatory Commission regulations, the CMS5000 oven, which contains a sealed radioactive source, may not be repaired by unauthorized personnel. INFICON will provide the maintenance, repair, replacement and disposal of the radioactive source, as well as any part of the detector.
For water analysis, VOCs are purged from the water flowing through the water vessel. Argon will bubble into the water, the gas bubbles will rise through the water and collect at the top of the collection tube. As the bubbles rise, a portion of the VOCs will pass from the water phase to the gas phase — this is known as "partitioning". The ratio of the VOC concentration in the water phase, VOC the concentration in the gas phase, VOC equation [1].
IPN 074-508-P1C
Each compound will partition according to its solubility in water, its vapor pressure, the specific water sampling matrix and the temperature. The quantity of VOCs detected is dependent on the partition coefficient. In general, highly polar compounds are more readily detected than less polar compounds.
A permeation tube that contains toluene is used as a check standard to ensure proper system calibration and verify sample integrity. It will compensate for normal fluctuations in the column, the concentrator and detector sensitivity. The lifetime of the permeation tube is approximately 8 years.
After collection, the VOCs from the air or water samples are drawn into the CMS5000 with the internal pump and adsorbed by the concentrator. The VOCs are then desorbed into the column of the gas chromatograph by heating the concentrator and reversing the carrier gas flow.
, is the partition coefficient. See
gas
water,
to
[1]
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CMS5000 Operating Manual

1.2 Gas Chromatograph

The gas chromatograph (GC) performs a time separation of the sample compounds. The separation order is primarily based on increasing compound boiling point.
Argon is used as the carrier gas to transport analytes through a 100% dimethylpolysiloxane, 0.32 mm id, 30 M, 4.0 µm (or equivalent) column. The inside of the column is coated with a thin layer of material known as the stationary phase. The stationary phase selectively attracts components in a sample mixture. The mixture of sample compounds in the argon gas, also known as the mobile phase, interact with the chemicals of the stationary phase. The chemicals which spend the least time partitioned in the column will elute (exit) off the column first.
The time taken by an individual compound to travel into the system until the compound elutes from the column is referred to as the retention time (RT). If the GC conditions remain constant, the same compound will elute from the column at nearly the same retention time for each injection.
The performance of the column is affected by temperature, therefore, the column is housed in a temperature controlled oven. The oven is programmed to increase the temperature gradually (called ramping) to improve compound separation while decreasing analysis time. As the temperature increases, the compounds with the lowest boiling points will elute first with the standard non-polar phase coated column installed.
A chromatogram of eluting organic gases from the gas chromatograph is plotted as a function of time from the injection the compound mixture. The chromatogram depicts the separation of the various compounds from each other by the action of the gas chromatograph, as described above.

1.3 Micro Argon Ionization Detector (MAID)

The Micro Argon Ionization Detector (MAID) is sensitive to organic compounds having an ionization potential of 11.7 eV or lower, which includes halomethanes, haloethanes, carbon tetrachloride and 1,1,1-trichloroethane. The CMS5000 can detect these compounds, as well as other hydrocarbons, to parts-per trillion (PPT) levels.
The MAID uses argon as a carrier gas. When argon flows over a nickel-63 (Ni-63) source, argon atoms are energized to an excited, metastable state, while other argon atoms are ionized. The excitation energy of argon is approximately 11.7 eV.
Ar
Ar* (Energized to excited state)
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1 - 2
When an organic molecule (R) enters the detector, it collides with the metastable
WARNING
argon (Ar*). During this collision, energy is released to the organic molecule. Since the ionization potential of most organic compounds is less than 11.7 eV, the metastable argon atoms will ionize them, producing positive ions and electrons. The reaction is illustrated as follows:
Ar* + R
Ar + R + e
High voltage applied across the detector produces a current, which is amplified and measured to produce a chromatogram.

1.4 Radioactive Source

The MAID in the CMS5000 contains a radioactive isotope in a solid form of Ni-63, with an activity level of up to 2.4 millicuries. The half-life of Ni-63 is approximately 96 years. The source of the radioactivity is sealed within a stainless steel cylinder which is located within the detector cavity. Per New York State radioactive materials license regulations, a wipe test is required for the Ni-63 source every 36 months. The first test is completed at the factory prior to shipment.
CMS5000 Operating Manual
-
No repair of the detector cell should be performed by the user. If the detector cell does not exhibit an electronic signal, the isotope may require replacement. Contact
INFICON for repair or replacement of the detector cell.
The State of New York Department of Labor, Division of Safety and Health and the United States Nuclear Regulatory Commission under either a Specific License or a General License authorizes possession and use of the radioactive source in the instrument. A copy of the terms and requirements of a General Licensee (section 12 NYCRR, part 38:41, table 3, item b) accompanied INFICON transfer of this instrument. The safety requirements of the Specific License or General License are designed to protect the user and the public from unnecessary prolonged exposure
IPN 074-508-P1C
to radiation. Following these requirements is imperative.
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CMS5000 Operating Manual
WARNING
WARNING - Risk Of Electric Shock
CAUTION

1.5 Definition of Note, Hint, Danger, Warning and Caution Paragraphs

NOTE: This is a note paragraph. Notes provide additional information about the
current topic.
HINT: This is a hint paragraph. Hints provide insight into product usage
This is a Warning paragraph. It warns of actions that may cause physical injury.
This Warning paragraph warns of the presence of electrical voltages which may cause physical injury.
This is a Caution paragraph. It cautions against actions which may damage the instrument or lead to the loss of data.
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1 - 4

2.1 Gas Chromatograph Specifications

Column . . . . . . . . . . . . . . . . . . . . . . . 100% dimethylpolysiloxane, 0.32 mm id,
4.0
µm df or equivalent
Valves . . . . . . . . . . . . . . . . . . . . . . . . Stainless Steel body/Teflon diaphragm
Temperature Programmable
Column Module . . . . . . . . . . . . . . . . 55-200
Carrier Gas. . . . . . . . . . . . . . . . . . . . Argon 99.9999% @ 414-689 kPa
(60-100 psi)
Variable Column Pressure Control . . Regulator pre-set to 90 psi
Sample Inlet . . . . . . . . . . . . . . . . . . . Water Vessel with purge-and-trap SituProbe
Air Sampling Tube
CMS5000 Operating Manual
Chapter 2
Specifications
°C

2.2 MAID - Micro Argon Ionization Detector

Temperature . . . . . . . . . . . . . . . . . . . Maximum 110°C
Sensitivity . . . . . . . . . . . . . . . . . . . . . 0.5 ppb Benzene in water, s/n > 200:1
0.5 ppb MTBE in water, s/n > 15:1
Detection Limit . . . . . . . . . . . . . . . . . PPB- PPT in air
Dynamic Range . . . . . . . . . . . . . . . . 3 decades
Stability . . . . . . . . . . . . . . . . . . . . . . . 5 runs of 5 ppb Benzene in air and water:
RSD calculated <15%
Radioactive Source . . . . . . . . . . . . . 2.4 mCi Ni-63
IPN 074-508-P1C

2.3 Communication

Integration . . . . . . . . . . . . . . . . . . . . TCP/IP based
USB for local diagnostics I/O Relay Contacts
FTP. . . . . . . . . . . . . . . . . . . . . . . . . . Configurable for automated data upload
Storage/Archival . . . . . . . . . . . . . . . . 16 GB Flash Drive
System Status . . . . . . . . . . . . . . . . . Status table for system operating changes
Wireless Connectivity . . . . . . . . . . . . 802.11 B/G
Optional Touch Screen . . . . . . . . . . . 6.5" VGA color display with touch screen
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CMS5000 Operating Manual

2.4 Physical Operating Requirements

Size . . . . . . . . . . . . . . . . . . . . . . . . . 16.9 in x 32.7 in x 10.2 in
(43 cm x 83 cm x 26 cm)
Weight . . . . . . . . . . . . . . . . . . . . . . . 55.1 lb (25 kg)
Power . . . . . . . . . . . . . . . . . . . . . . . . 120-240 V(ac)
Temperature . . . . . . . . . . . . . . . . . . . 5

2.5 Analysis and Protocols

Integrated Performance Standard . . Toluene permeation tube for check standard
Detectable Compounds . . . . . . . . . . Volatile organic compounds
Acceptance Protocol . . . . . . . . . . . . Initial setup with BTEX standard
Data Analysis . . . . . . . . . . . . . . . . . . Automatic peak detection and area
°C to 45°C (ambient and water
temperature)
calibration
(e.g. halogenated and non-halogenated aliphatic and aromatic hydrocarbons, etc.)
integration for known compounds
2 - 2
IPN 074-508-P1C

3.1 CMS5000 Feature Options

3.1.1 Analytical Unit

CMS5000 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .935-600-G1

3.1.2 Sampling Source

Water, No Vessel . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .935-700-G1
Water, Standard Vessel . . . . . . . . . . . . . . . . . . . . . . . . . . . .935-700-G3
Air, Sampling System . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 935-701-G1

3.1.3 Integration

CMS5000 Operating Manual
Chapter 3
System Setup
Ethernet, 802.11g, Wireless . . . . . . . . . . . . . . . . . . . . . . . . .935-710-G1
I/O Relays and 3’ cable, Ethernet, and 802.11g Wireless . . 935-711-G1

3.1.4 Ship Kits

CMS5000 120 V (USA) . . . . . . . . . . . . . . . . . . . . . . . . . . . . 935-721-G1
CMS5000 230 V (European) . . . . . . . . . . . . . . . . . . . . . . . .935-721-G2
CMS5000 230 V (UK) . . . . . . . . . . . . . . . . . . . . . . . . . . . . .935-721-G3
CMS5000 230 V (China) . . . . . . . . . . . . . . . . . . . . . . . . . . . 935-721-G4

3.1.5 Laptop PC with CMS IQ Software

IPN 074-508-P1C
CMS IQ Software, No Laptop. . . . . . . . . . . . . . . . . . . . . . . .935-030-G1
Laptop w/CMS IQ Software (USA) . . . . . . . . . . . . . . . . . . . .935-731-G1
Laptop w/CMS IQ Software (European). . . . . . . . . . . . . . . .935-731-G2
Laptop w/CMS IQ Software (UK) . . . . . . . . . . . . . . . . . . . . .935-731-G3
Laptop w/CMS IQ Software (China) . . . . . . . . . . . . . . . . . . .935-731-G4
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CMS5000 Operating Manual

3.2 CMS5000 Ship Kit Contents

The Ship Kit will contain the following items:
Power Supply . . . . . . . . . . . . . . . . . . 930-469-P1 (110 V USA)
Ethernet Cable . . . . . . . . . . . . . . . . . 600-1319-P2
CMS5000 Operator Manual . . . . . . . 074-508-P1
Argon Tank Regulator . . . . . . . . . . . 935-412-P1
Argon Fill Line . . . . . . . . . . . . . . . . . 935-212-G1
Quick Disconnect Stem . . . . . . . . . . 059-0329
CMS5000 Training CD . . . . . . . . . . . 074-5020-G1

3.3 CMS5000 Diagram

930-469-G4 (230 V China) 930-469-P2 (230 V European) 930-469-G3 (230 V UK)
3 - 2
IPN 074-508-P1C

3.4 Mounting Instructions

CAUTION
WARNING
Installation of the CMS5000 must be performed by an INFICON authorized technician.
The CMS5000 Monitoring System is heavy. Use proper saftey procedures and PPE when mounting the unit.
NOTE: After the CMS5000 has been powered on, the system should only be
operated with the door closed to ensure stability of heated internal components
The CMS5000 Monitoring System requires mounting as well as some minor assembly. The four mounting brackets included in the ship kit need to be attached to the four corners on the back of the unit. Position the bracket on the analytical module by lining up the openings in the bracket and on the unit. Place the washer over the lag bolt and using a socket wrench, screw in the lag bolt until tight (see page 5 of the instructions included with the hardware). See Figure 3-1.
CMS5000 Operating Manual
NOTE: The nuts included with the lag bolts are not needed to mount the brackets
to the unit.
Figure 3-1 Attaching the Mounting Brackets
IPN 074-508-P1C
Structural mounting hardware is not included. It is the responsibility of the user to ensure that proper mounting hardware is used to support the weight of the CMS5000, and (if the CMS5000 is to be used for continual online water monitoring)
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CMS5000 Operating Manual
the filled sampling vessel. The CMS5000 weighs 55.1 lbs. (25 kg). All plumbing to and from the sampling vessel should be supported independently of the analytical module, as the system design will not support any additional weight.
For air monitoring, the CMS5000 should be mounted in an optimal location for collecting air samples of interest. Care should be exercised to avoid locations affected by air currents from heating or cooling systems, doors, windows or structural openings.
To ensure proper operation when utilizing the CMS5000 for continuous water monitoring, it is necessary to determine optimal mounting height and unit placement to accommodate both the water intake as well as allow for clearance for the sample collection tube when attaching and removing the sampling vessel. Allow a minimum of a 15” (38.1 cm) clearance below the mounted sampling vessel for vessel removal. Verify that the CMS5000 is level when mounted and that the slope is less than five percent. See Figure 3-2.
Figure 3-2 Dimensions for Mounting the CMS5000
3 - 4
IPN 074-508-P1C
CMS5000 Operating Manual

3.5 Water Monitoring Assembly Instructions

If not using the CMS5000 for water monitoring, skip to section 3.8 on page 3-8.
The temperature sensor, or RTD, will be unfastened and taped to the bottom of the CMS5000 for shipment. Remove the tape, guide the excess wire back into the CMS5000, and screw the stainless steel nut into the port nearest to the beige sample collection tube mounting bracket located on the bottom of the CMS5000. The Swagelok® fitting should be tightened 1/4 turn past finger tight using a 7/16” open end wrench. See Figure 3-3.
Figure 3-3 Attaching the Temperature Sensor
The PEEK purge tube (found in the ship kit) is attached to the middle port in the beige sample collection tube mounting bracket. See Figure 3-4.
Figure 3-4 Attaching the PEEK Purge Tube
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CMS5000 Operating Manual
Install the collection tube o-ring into the beige sample collection tube mounting bracket. Screw the clear acrylic sample collection tube from the ship kit into the beige sample collection tube mounting bracket located on the bottom of the CMS5000 until finger tight. Do not over tighten. See Figure 3-5 and Figure 3-6.
Figure 3-5 Attaching the sample collection tube
Figure 3-6 Attached Sample Tube
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CMS5000 Operating Manual

3.6 Attaching the Water Sampling Vessel

NOTE: If you are not using the CMS5000 for water monitoring, skip sections
section 3.6 and section 3.7.
The optional sampling vessel mounts to the bottom of the CMS5000 using the wing nuts supplied in the sampling source kit. See Figure 3-7.
Figure 3-7 Optional Sampling Vessel
Attach the sampling vessel to the CMS5000 by aligning the screws with the four openings on the flange of the sampling vessel. Hold the vessel against the mounting screw standoffs and screw on the wing nuts to hold the sampling vessel in place. See Figure 3-8.
Figure 3-8 Attaching the Sampling Vessel
IPN 074-508-P1C
The function of the standoffs is to provide spacing between the CMS5000 and the vessel to allow water overflow to prevent water from entering the analytical module. See Figure 3-9.
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CMS5000 Operating Manual
Standoffs
Wingnuts
Figure 3-9 Standoffs for Overflow

3.7 Connecting the Water Supply

If not using the CMS5000 for water monitoring, skip this section.
It is the responsibility of the integrator to configure any and all plumbing. Care should be taken to support the weight of all plumbing hoses and hardware independently of the CMS5000.

3.8 Air Monitoring Assembly Instructions

The CMS5000 easily converts to a continuous Air Monitoring System via two configurations. The first configuration, designed for ambient air sampling, requires the user to replace the water collection tube with a air collection tube with attached filter. The filter at the opening of the collection tube prevents large particulates in the sampling environment from entering the system.The second configuration is designed for in-line air sampling. This configuration is more complex.
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3 - 8

3.8.1 Ambient Air Sampling

Ambient air sampling requires only the Air Sampling Tube (Figure 3-10). See
Figure 3-10.
Figure 3-10 CMS5000 Air Sampling Tube
Attach the Air Sampling Tube. See Figure 3-11.
CMS5000 Operating Manual
Figure 3-11 CMS5000 with Air Sampling Tube Attached
IPN 074-508-P1C
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CMS5000 Operating Manual
Center Port
Air Monitoring Sample Inlet Line Configuration

3.8.2 Air Line Sampling

Preparing the CMS5000 is more intensive for this type of sampling. First, attach a sampling inlet line with a 1/8" compression fitting (with ferrule). In the example, the purge line is removed from the center port (Figure 3-12) and moved to the right port to become the Sample Inlet Line (Figure 3-13).
Figure 3-12 Purge Line in Position for Water Sampling
Figure 3-13 Sample Inlet Line in Postition for Air Sampling
IPN 074-508-P1C
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