Supermicro X12SCZ-F operation manual

X12SCZ-TLN4F/QF/F
USER'S MANUAL
Revision 1.0
The information in this user’s manual has been carefully reviewed and is believed to be accurate. The manufacturer
!
assumes no responsibility for any inaccuracies that may be contained in this document, and makes no commitment to update or to keep current the information in this manual, or to notify any person or organization of the updates.
Please Note: For the most up-to-date version of this manual, please see our website at www.supermicro.com.
Super Micro Computer, Inc. ("Supermicro") reserves the right to make changes to the product described in this manual at any time and without notice. This product, including software and documentation, is the property of Supermicro and/ or its licensors, and is supplied only under a license. Any use or reproduction of this product is not allowed, except as expressly permitted by the terms of said license.
IN NO EVENT WILL Super Micro Computer, Inc. BE LIABLE FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGES. IN PARTICULAR, SUPER MICRO COMPUTER, INC. SHALL NOT HAVE LIABILITY FOR ANY HARDWARE, SOFTWARE, OR DATA STORED OR USED WITH THE PRODUCT, INCLUDING THE COSTS OF REPAIRING, REPLACING, INTEGRATING, INSTALLING OR RECOVERING SUCH HARDWARE, SOFTWARE, OR DATA.
Any disputes arising between manufacturer and customer shall be governed by the laws of Santa Clara County in the State of California, USA. The State of California, County of Santa Clara shall be the exclusive venue for the resolution of any such disputes. Supermicro's total liability for all claims will not exceed the price paid for the hardware product.
FCC Statement: This equipment has been tested and found to comply with the limits for a Class A digital device pursuant to Part 15 of the FCC Rules. These limits are designed to provide reasonable protection against harmful interference when the equipment is operated in a commercial environment. This equipment generates, uses, and can radiate radio frequency energy and, if not installed and used in accordance with the manufacturer’s instruction manual, may cause harmful interference with radio communications. Operation of this equipment in a residential area is likely to cause harmful interference, in which case you will be required to correct the interference at your own expense.
California Best Management Practices Regulations for Perchlorate Materials: This Perchlorate warning applies only to products containing CR (Manganese Dioxide) Lithium coin cells. “Perchlorate Material-special handling may apply. See www.dtsc.ca.gov/hazardouswaste/perchlorate”.
WARNING: This product can expose you to chemicals including lead, known to the State of California to cause cancer and birth defects or other reproductive harm. For more information, go to www.P65Warnings.ca.gov.
The products sold by Supermicro are not intended for and will not be used in life support systems, medical equipment, nuclear facilities or systems, aircraft, aircraft devices, aircraft/emergency communication devices or other critical
systems whose failure to perform be reasonably expected to result in signicant injury or loss of life or catastrophic
property damage. Accordingly, Supermicro disclaims any and all liability, and should buyer use or sell such products for use in such ultra-hazardous applications, it does so entirely at its own risk. Furthermore, buyer agrees to fully indemnify, defend and hold Supermicro harmless for and against any and all claims, demands, actions, litigation, and proceedings of any kind arising out of or related to such ultra-hazardous use or sale.
Manual Revision 1.0
Release Date: July 30, 2020
Unless you request and receive written permission from Super Micro Computer, Inc., you may not copy any part of this
document. Information in this document is subject to change without notice. Other products and companies referred
to herein are trademarks or registered trademarks of their respective companies or mark holders.
Copyright © 2020 by Super Micro Computer, Inc. All rights reserved.
Printed in the United States of America
Preface
Preface
About This Manual
This manual is written for system integrators, IT technicians and knowledgeable end users. It provides information for the installation and use of the X12SCZ-TLN4F/QF/F motherboard.
About This Motherboard
The X12SCZ series comes in di󰀨erent model variations with di󰀨erent CPU support. The
X12SCZ-TLN4F/F supports Intel® Xeon W-1200 series, 10th Generation Core i9/i7/i5/i3, Pentium, and Celeron processors in an LGA1200 socket, while the X12SCZ-QF supports Intel 10th Generation Core i9/i7/i5/i3, Pentium, and Celeron processors in an LGA1200 socket. The X12SCZ-TLN4F/F features the W480E chipset and support for ECC and Non­ECC DDR4 UDIMM memory, while the X12SCZ-QF features the Q470E chipset and support for Non-ECC only. The X12SCZ series motherboards include the PCI Express 3.0 interface, four SATA 3.0 ports, IPMI 2.0, 12V DC power source, GPU add-on card power connector, dual 10GbE LAN option (on -TLN4F), HD Graphic outputs, and a combination of USB 2.0 and 3.2 ports. The motherboards also provide security-enhancing technologies such as Intel Software Guard Extensions (Intel SGX), Intel vPro, and Intel Trusted Execution Technology
(TXT). The X12SCZ-TLN4F/QF/F o󰀨ers exceptional system performance for entry server,
data storage, network security, and embedded applications.
Conventions Used in the Manual
Special attention should be given to the following symbols for proper installation and to
prevent damage done to the components or injury to yourself:
Warning! Indicates important information given to prevent equipment/property damage
or personal injury.
Warning! Indicates high voltage may be encountered while performing a procedure.
Important: Important information given to ensure proper system installation or to
relay safety precautions.
Note: Additional Information given to di󰀨erentiate various models or provides infor- mation for proper system setup.
3
Super X12SCZ-TLN4F/QF/F User's Manual
Contacting Supermicro
Headquarters
Address: Super Micro Computer, Inc.
980 Rock Ave.
San Jose, CA 95131 U.S.A.
Tel: +1 (408) 503-8000
Fax: +1 (408) 503-8008
Email: marketing@supermicro.com (General Information)
support@supermicro.com (Technical Support)
Website: www.supermicro.com
Europe
Address: Super Micro Computer B.V.
Het Sterrenbeeld 28, 5215 ML
's-Hertogenbosch, The Netherlands
Tel: +31 (0) 73-6400390
Fax: +31 (0) 73-6416525
Email: sales@supermicro.nl (General Information)
support@supermicro.nl (Technical Support)
rma@supermicro.nl (Customer Support)
Website: www.supermicro.nl
Asia-Pacic
Address: Super Micro Computer, Inc.
3F, No. 150, Jian 1st Rd.
Zhonghe Dist., New Taipei City 235
Taiwan (R.O.C)
Tel: +886-(2) 8226-3990
Fax: +886-(2) 8226-3992
Email: support@supermicro.com.tw
Website: www.supermicro.com.tw
4
Preface
Table of Contents
Chapter 1 Introduction
1.1 Checklist ...............................................................................................................................8
Quick Reference ...............................................................................................................11
Quick Reference Table ......................................................................................................12
Motherboard Features .......................................................................................................14
1.2 Processor and Chipset Overview .......................................................................................18
1.3 Special Features ................................................................................................................19
Recovery from AC Power Loss .........................................................................................19
1.4 System Health Monitoring ..................................................................................................19
Onboard Voltage Monitors ................................................................................................19
Fan Status Monitor with Firmware Control .......................................................................19
Environmental Temperature Control .................................................................................19
System Resource Alert......................................................................................................20
1.5 ACPI Features ....................................................................................................................20
1.6 Power Supply ......................................................................................................................20
1.7 Serial Port ...........................................................................................................................21
Chapter 2 Installation
2.1 Static-Sensitive Devices .....................................................................................................22
Precautions .......................................................................................................................22
Unpacking .........................................................................................................................22
2.2 Processor and Heatsink Installation ...................................................................................23
Installing the LGA1200 Processor ....................................................................................23
Installing an Active CPU Heatsink with Fan .....................................................................25
Removing the Heatsink .....................................................................................................27
2.3 Motherboard Installation .....................................................................................................28
Tools Needed ....................................................................................................................28
Location of Mounting Holes ..............................................................................................28
Installing the Motherboard.................................................................................................29
2.4 Memory Support and Installation .......................................................................................30
Memory Support ................................................................................................................30
DIMM Module Population Conguration ...........................................................................30
5
Super X12SCZ-TLN4F/QF/F User's Manual
General Guidelines for Optimizing Memory Performance ................................................31
DIMM Installation ..............................................................................................................32
DIMM Removal .................................................................................................................32
2.5 Rear I/O Ports ....................................................................................................................33
2.6 Front Control Panel ............................................................................................................39
2.7 Connectors .........................................................................................................................44
Power Connections ...........................................................................................................44
Headers .............................................................................................................................47
2.8 Jumper Settings .................................................................................................................57
How Jumpers Work ...........................................................................................................57
2.9 LED Indicators ....................................................................................................................64
Chapter 3 Troubleshooting
3.1 Troubleshooting Procedures ..............................................................................................66
Before Power On ..............................................................................................................66
No Power ..........................................................................................................................66
No Video ...........................................................................................................................67
System Boot Failure .......................................................................................................67
Memory Errors ..................................................................................................................67
Losing the System's Setup Conguration .........................................................................68
When the System Becomes Unstable ..............................................................................68
3.2 Technical Support Procedures ...........................................................................................70
3.3 Frequently Asked Questions ..............................................................................................71
3.4 Battery Removal and Installation .......................................................................................72
Battery Removal ................................................................................................................72
Proper Battery Disposal ....................................................................................................72
Battery Installation .............................................................................................................72
3.5 Returning Merchandise for Service ....................................................................................73
Chapter 4 UEFI BIOS
4.1 Introduction .........................................................................................................................74
4.2 Main Setup .........................................................................................................................75
4.3 Advanced Setup Congurations .........................................................................................77
4.4 Event Logs ....................................................................................................................... 111
4.5 IPMI ..................................................................................................................................113
6
Preface
4.6 Security .............................................................................................................................116
4.7 Boot ..................................................................................................................................123
4.8 Save & Exit .......................................................................................................................126
Appendix A BIOS Codes
A.1 BIOS Error POST (Beep) Codes .....................................................................................128
A.2 Additional BIOS POST Codes ..........................................................................................129
Appendix B Software
B.1 Microsoft Windows OS Installation ...................................................................................130
B.2 Driver Installation ..............................................................................................................132
B.3 SuperDoctor® 5 .................................................................................................................133
B.4 IPMI ..................................................................................................................................134
Appendix C Standardized Warning Statements
Appendix D UEFI BIOS Recovery
D.1 Overview ...........................................................................................................................138
D.2 Recovering the UEFI BIOS Image ...................................................................................138
D.3 Recovering the BIOS Block with a USB Device ..............................................................138
7
Super X12SCZ-TLN4F/QF/F User's Manual
Chapter 1
Introduction
Congratulations on purchasing your computer motherboard from an industry leader. Supermicro motherboards are designed to provide you with the highest standards in quality and performance.
In additon to the motherboard, several important parts that are included in the retail box are listed below. If anything listed is damaged or missing, please contact your retailer.

1.1 Checklist

Main Parts List
Description Part Number Quantity
Supermicro Motherboard X12SCZ-TLN4F/QF/F 1
I/O Shield MCP-260-00093-0N 1
SATA Cables CBL-0044L 4
Quick Reference Guide MNL-2257-QRG 1
Important Links
For your system to work properly, please follow the links below to download all necessary drivers/utilities and the user’s manual for your server.
Supermicro product manuals: http://www.supermicro.com/support/manuals/
Product drivers and utilities: https://www.supermicro.com/wftp/driver
Product safety info: http://www.supermicro.com/about/policies/safety_information.cfm
A secure data deletion tool designed to fully erase all data from storage devices can be
found at our website: https://www.supermicro.com/about/policies/disclaimer.cfm?url=/wftp/
utility/Lot9_Secure_Data_Deletion_Utility/
If you have any questions, please contact our support team at: support@supermicro.com
This manual may be periodically updated without notice. Please check the Supermicro website
for possible updates to the manual revision level.
8
Chapter 1: Introduction
Figure 1-1. X12SCZ-TLN4F Motherboard Image
Note 1: LAN ports 3/4 are only available on X12SCZ-TLN4F.
Note 2: All graphics shown in this manual were based upon the latest PCB revision
available at the time of publication of the manual. The motherboard you received may or may not look exactly the same as the graphics shown in this manual.
9
Super X12SCZ-TLN4F/QF/F User's Manual
Figure 1-2. X12SCZ-QF Motherboard Layout
(not drawn to scale)
UID_LED1
UID SW
DP++1/2
PCH SLOT7 PCIe 3.0 X4
JPCIE_SLT7
JPL1
JPL3/4:LAN3/4 1-2:ENABLE 2-3:DISABLE
AUDIO FP
COM1/2
JIPMB1
J18
MH8
JPAC1
PCH SLOT4 PCIe 3.0 X4 (IN X8)
JPCIE_SLT4
SRW4
SRW2
MH4
JBM1
BMC_HB_LED1
JPCIE6
CPU SLOT6 PCIe 3.0 X16
JPL2
J10G_PWR
JPTG1
DVI-D/VGA
FAN4
JLAN3/4
JVRM1
JLAN1/2
JBM2
USB6/7 (3.2 10G)
IPMI_LAN
USB8/9(3.2 10G)
MH3
JPV1
JPW1
JPME2
JGP1
JTPM1
JPG1
JPT1
USB10/11 (3.2 10Gb)
MH1
I-SATA3
I-SATA2 I-SATA1
JBT1
SP1
I-SGPIO1
JMD1
SRW3
ART1
JRF1
BAR CODE
SAN CODE
BAR CODE
JMD2
Intel
W480/Q470
JPWR1
JWD1
FANB
JD1
JSMB1
FANA
JSD1
BIOS LICENSE
MH5
JL1
BT1
+
BAR CODE
BAR CODE
BAR CODE
I-SATA0
MH7
USB0/1
USB2/3
USB4/5
X12SCZ-QF
REV:1.01 DESIGNED IN USA
JF1:
ON
ON
X
X
FF
FF
OH
OH
RST
RST
NIC1
NIC2 NIC1
NIC2
PWR
PWR
DIMMB2
DIMMB1
DIMMA2
DIMMA1
MH2
JPH1
FAN1
JPI2C1
LED
LED
LED
LED
XNMI
NMIX
HDD
HDD
PWR
PWR
LED1
JF1
FAN3
MH6
FAN2
Note 1: LAN ports 3/4 are only available on X12SCZ-TLN4F.
Note 2: Components not documented are for internal testing only.
10
JPAC1
COM1/2
SLOT4
JIPMB1
J18
JGP1
JPME2
JPG1
JTPM1
JPT1
ART1
USB10/11
JMD2
I-SATA3
I-SATA2
JBT1
I-SATA1
SP1
JSMB1
I-SGPIO1
JD1
JMD1
AUDIO FP
AUDIO FP
JPAC1
COM1/2
JIPMB1
J18
JPME2
JGP1
JTPM1
USB10/11 (3.2 10Gb)
I-SATA3
I-SATA2 I-SATA1
SRW4
MH8
PCH SLOT4 PCIe 3.0 X4 (IN X8)
JPCIE_SLT4
SRW4
JPG1
JPT1
ART1
MH1
JBT1
SP1
I-SGPIO1
JMD1
SRW3
JRF1
SLOT6
BMC_HB_LED1
SRW2
BAR CODE
SAN CODE
JMD2
Intel
W480/Q470
JPWR1
JWD1
BAR CODE
JBM1
UID_LED1
SLOT7
MH4
JBM1
JPCIE6
CPU SLOT6 PCIe 3.0 X16
JSMB1
JD1
FANB
FANA
JSD1
BIOS LICENSE
MH5
JL1
PCH SLOT7 PCIe 3.0 X4
I-SATA0
MH7

Quick Reference

UID SW
UID_LED1
UID SW
JPCIE_SLT7
JPL1
BT1
+
BAR CODE
BAR CODE
BAR CODE
DP++1/2
DP++1/2
JPL2
JPL3/4:LAN3/4 1-2:ENABLE 2-3:DISABLE
USB0/1
J10G_PWR
USB2/3
DVI-D/VGA
JPTG1
USB4/5
DVI-D/VGA
FAN4
X12SCZ-QF
REV:1.01 DESIGNED IN USA
JF1:
ON
ON
PWR
PWR
RST
RST
JLAN3/4
X
X
FF
FF
LED
LED
OH
OH
NIC1
NIC2 NIC1
NIC2
HDD
HDD
JLAN3/4
LED
LED
XNMI
NMIX
PWR
PWR
JF1
JVRM1
LED1
JLAN1/2
JLAN1/2
JBM2
FAN3
Chapter 1: Introduction
IPMI_LAN
USB6/7
USB6/7 (3.2 10G)
USB8/9
IPMI_LAN
USB8/9(3.2 10G)
MH3
JPV1
JPW1
DIMMA2
DIMMA1
FAN2
DIMMB2
DIMMB1
MH2
JPH1
FAN1
JPI2C1
MH6
JPV1
J10G_PWR
JBM2
JPTG1 JPW1 JVRM1
FAN4
JPL2 JPL1
BT1
DIMMA1 DIMMA2
DIMMB1 DIMMB2
JPH1
FAN1
JPI1C1
SRW3
JRF1
JWD1
JPWR1
FANB
FANA
I-SATA0
JSD1
JL1
USB2/3
USB0/1
USB4/5
JF1
LED1
FAN3
FAN2
Notes:
See Chapter 2 for detailed information on jumpers, I/O ports, and JF1 front panel con-
nections.
" " indicates the location of Pin 1.
Jumpers/LED indicators not indicated are used for testing only.
Use only the correct type of onboard CMOS battery as specied by the manufacturer. Do
not install the onboard battery upside down to avoid possible explosion.
11
Super X12SCZ-TLN4F/QF/F User's Manual

Quick Reference Table

Jumper Description Default Setting (*)
J10G_PWR LAN3/LAN4 Power Option
JBM1 IPMI Share LAN Feature Pins 1-2 Open (Enabled)
JBM2 IPMI LAN Enable/Disable
JBT1 CMOS Clear Open (Normal)
JPAC1 Front Panel Audio EnableDisable Pins 1-2 (Enabled)
JPG1 VGA Enable/Disable Pins 1-2 (Enabled)
JPL1 LAN1 Enable/Disable Pins 1-2 (Enabled)
JPL2 LAN2 Enable/Disable Pins 1-2 (Enabled)
JPME2 Manufacturing Mode Select Pins 1-2 (Normal)
JRF1 Slot6 PCIe Bifurcation Option
JPT1 Onboard TPM Module Enable/Disable Pins 2-3 (Disabled)
JPTG1 LAN3/LAN4 Enable/Disable Pins 1-2 (Enabled)
JWD1 Watch Dog Timer Pins 1-2 (Reset)
*Pins 1-2: Standby Power
Pins 2-3: Normal Power
*Pins 1-3 Short (Enabled)
Pins 1-2 Short (Disabled)
*Pins 1-2 (x16)
Pins 2-3 (x8x8)
LED Description Status
BMC_HB_LED1 BMC Heartbeat LED Blinking Green: BMC Normal
UID_LED1 Unit Identier (UID) LED Solid Blue: Unit Identied
LED1 Power LED
Solid Green: Power On
Blinking Green: S3 Status
Connector Description
ART1 M.2 M-Key Temperature Sensor
AUDIO_FP Front Panel Audio Header
BT1 Onboard Battery
COM1/2 COM Header (supports RS-232)
DP++ 1/2 DisplayPorts 1 and 2
DVI-D/VGA DVI-D/VGA port
FAN1 - FAN4, FANA, FANB CPU/System Fan Headers (FAN1: CPU Fan)
IPMI_LAN Dedicated IPMI LAN Port
I-SATA0 - I-SATA3 Intel® PCH SATA 3.0 Ports (I-SATA0: SATA DOM)
I-SGPIO1 Serial Link General Purpose I/O Header
J18 Extended CMOS Battery Connector
JD1 Speaker Header (Pins 1-4: Speaker, Pins 3-4: Buzzer)
JF1 Front Control Panel Header
JGP1 General Purpose I/O Header
Note: Table is continued on the next page.
12
Chapter 1: Introduction
Connector Description
JIPMB1 4-pin BMC External I2C Header (for an IPMI card)
JL1 Chassis Intrusion Header
JLAN1/2 1G Base-T LAN Ports
JLAN3/4 10G Base-T LAN Ports
JMD1 M.2 E-Key 2230 (CNVi/CNV) Slot
JMD2 M.2 M-Key 2280/22110 Slot
JPCIE_SLT4 PCH PCIe 3.0 x4 (in x8) Slot
JPCIE6 CPU PCIe 3.0 x16 Slot
JPCIE_SLT7 PCH PCIe 3.0 x4 Slot
JPH1 4-pin HDD Power Connector
JPI2C1 Power System Management Bus (SMB) I2C Header
JPV1
JPW1 24-pin ATX Power Connector
JPWR1 4-pin 12V Power Connector for GPU card requiring extra 12V power (up to 75W)
JSD1 SATA DOM Power Connector
JSMB1 System Management Bus Header
JTPM1 Trusted Platform Module/Port 80 Connector
SP1 Internal Buzzer
SRW2 M.2 Holding Screws for M-Key Type 2280
SRW3 M.2 Holding Screws for E-Key Type 2230
SRW4 M.2 Holding Screws for M-Key Type 22110
UID SW Unit Identier Switch
USB0/1, 2/3, 3/4 USB 2.0 Headers
USB6/7, 8/9 Back Panel USB 3.2 (10Gb) Ports
USB10/11 USB 3.2 (10Gb) Type-A Header
8-pin 12V DC Power Connector for CPU (Required) or alternative single power for special
enclosure when the 24-pin ATX power is not in use
13
Super X12SCZ-TLN4F/QF/F User's Manual

Motherboard Features

Motherboard Features
CPU
X12SCZ-TLN4F/F: Intel 10th Generation Core i9/i7/i5/i3, Pentium, Celeron, and Xeon W-1200 series processors in an
LGA1200 socket.
X12SCZ-QF: Intel 10th Generation Core i9/i7/i5/i3, Pentium, and Celeron processor in an LGA1200 socket.
Memory
X12SCZ-TLN4F/F: Integrated memory controller supports up to 128GB Unbu󰀨ered ECC/Non-ECC UDIMM, DDR4-
2933MHz, in four DIMM slots.
X12SCZ-QF: Integrated memory controller supports up to 128GB Unbu󰀨ered Non-ECC UDIMM, DDR4-2933MHz, in four
DIMM slots.
DIMM Size
4GB, 8GB, 16GB, 32GB at 1.2V
Note: For the latest CPU/memory updates, please refer to our website at http://www.supermicro.com/products/
motherboard.
Chipset
X12SCZ-F/TLN4F: Intel PCH W480E
X12SCZ-QF: Intel PCH Q470E
Expansion Slots
One PCIe 3.0 x4 Slot (IN x8) (PCH SLOT4)
One PCIe 3.0 x16 Slot (CPU SLOT6) (Supports PCI-E x8x8 bifurcation by riser card)
One PCIe 3.0 x4 Slot (PCH SLOT7)
Network
Intel I219LM Gigabit Ethernet PHY (LAN1): Intel AMT Management Port
Intel I210-AT Gigabit Ethernet Controller (LAN2): IPMI Shared LAN Port
Intel X550 Dual 10GbE Ethernet Controller (LAN3/4, TLN4F SKU Only)
Baseboard Management Controller (BMC)
ASpeed AST 2500 Baseboard Controller (BMC) supports IPMI 2.0
One Dedicated IPMI LAN located on the rear IO back panel
Graphics
Intel HD Graphics (DVI-D, DisplayPort1/DisplayPort2 Version 1.4) with three independent displays
Graphics controller via ASpeed 2500 BMC (VGA)
I/O Devices
Serial (COM) Header One front accessible header for dual serial ports (COM1/2)
I-SATA 3.0 • Four SATA 3.0 ports with lock (I-SATA0 - I-SATA3)
Video (VGA) Port
DVI-D
DisplayPort
Audio
One VGA connection on the rear I/O panel
One Digital Visual Interface (Digital signal only)
Two DisplayPorts
One Audio Front Panel
Note: The table above is continued on the next page.
14
Chapter 1: Introduction
Motherboard Features
USB
Four Back Panel USB 3.2 (10Gb) ports (USB6/7, USB8/9)
Three Front Accessible USB 2.0 headers (USB0/1, USB2/3, USB4/5)
One USB 3.2 (10Gb) header (USB10/11)
BIOS
256Mb AMI BIOS
ACPI 6.0, Plug and Play (PnP), riser card auto detection support, SPI dual/quad speed support, and RTC (Real Time
Clock wakeup
Power Management
ACPI power management
S3, S4, S5
Power button override mechanism
Power-on mode for AC power recovery
Wake-on-LAN (JWOL)
Power supply monitoring
®
SPI Flash BIOS
System Health Monitoring
Onboard voltage monitoring for +12V, +5V, +3.3V, +5V stdby, +3.3V stdby, Vcore, CPU temperature, PCH temperature,
system temperature, M.2 NvMe (M-Key) temperature and memory temperature
3 CPU power, 1 PCH power, 1 BMC power
CPU thermal trip support
Platform Environment Control Interface (PECI)/TSI
Fan Control
Fan status monitoring via IPMI connections
Low-noise fan speed control
Six 4-pin fan headers
System Management
IPMI Vieew, SMCIPMITOOL, IPMICFG
Trusted Platform Module (TPM) support
SuperDoctor® 5
Redundant power supply unit detection sensor
Chassis intrusion header and detection (Note: Please connect a cable from the Chassis Intrusion header at JD1 to the
chassis to receive an alert via IPMI.)
Client Platform Service
Note: The table above is continued on the next page.
15
Super X12SCZ-TLN4F/QF/F User's Manual
Motherboard Features
LED Indicators
CPU/system overheat LED
Power/suspend-state indicator LED
Fan failed LED
UID/remote UID
HDD activity LED
LAN activity LED
Dimensions
uATX 9.6" (W) x 9.6" (L) (243.84mm x 243.84mm)
Note 1: The CPU maximum thermal design power (TDP) is subject to chassis and
heatsink cooling restrictions. For proper thermal management, please check the chas-
sis and heatsink specications for proper CPU TDP sizing.
Note 2: For IPMI conguration instructions, please refer to the Embedded IPMI Con­guration User's Guide available at http://www.supermicro.com/support/manuals/.
16
Figure 1-3.
System Block Diagram
Chapter 1: Introduction
PCIe x16 SLOT
Rear I/O
Rear I/O
Rear I/O
Rear I/O
Internal Header
Internal Header
DVI-D
Display Port++
Display Port++
USB3.2 Type-A
USB3.2 Type-A
USB3.2 Type-A
USB3.2 Type-A
USB3.2x2
Type-A
USB2.0
x6
Realtek ALC888S-VD2
Audio FP
PCIe3.0_x16/ PCIe3.0 x8x8
8.0GT/s
TMDS
ASM1442K
Digital port 3
Digital port 2
Gen2 10 GT/s
Gen2 10 GT/s
Gen2 10 GT/s
Gen2 10 GT/s
Gen2 10 GT/s
480 MT/s
PCA95548 bit-GPIO P/H
HD-A
DDI 1
INTEL LGA1200
(Socket-H4)
DDI 3
DDI 2
USB 3.2[1]
USB 2.0[1]
USB 3.2[2]
USB 2.0[2]
PCH-H
USB 3.2[3]
USB 2.0[3]
W480E/Q470E
USB 3.2[4]
USB 2.0[4]
USB 3.2[5:6]
USB 2.0[5:6]
USB 2.0[7:12]
SMBDAT/CLK_RSM
SPI
80 Port
TPM P/H
TPM 2.0
SLB9670VQ20FW785
FLASH SPI 256Mb
x4 DMI 8 GT/s
Intel
CS0#
PCIE[5]-GbE
PCIE[21-24]
PCIE[17:20]
SATA[1B:3]
USB 2.0[13]
eSPI
SW
PCIE[1:4]
PCIE[8]
CNVI
PCIE[6]
SATA[4]
PCIE[9-12]
SATA[0B]
PCIE[7]
SVID
DDR4 (CHA)
2933MHz- ECC
DDR4 (CHB)
2933MHz- ECC
PCIe3.0 x4
1250 Mbps-Phy
PCIe3.0 x1
PCIe3.0 x1
PCIe3.0 x4
PCIe3.0 x4
SATA 6 Gb/s
PCIe3.0 x4
SATA 6 Gb/s
SATA 6 Gb/s
BMC
AST2500
UART
IMVP8-VGT
IMVP8-Vcore
PCIe x4 Slot 4
GLAN1 I219LM
M.2 2230 E-Key
GLAN2 I210-AT
GLAN3 X550-AT2
M.2 2280/22110 M-Key
PCIe x4 Slot 7
SATA-DOM
SGPIO
NC-SI
RGMII
RGB
PWM , TACH
INFINEON
INFINEON
DIMMA1 DIMMA2
DIMMB1 DIMMB2
RJ45
MDI
1G-Base
MDI
RJ45
1G-Base
MDI
RJ45x2
10G-Base
IntelR Rapid Storage Technology — x2 and x4 PCIe* NVMe SSD — x2 and x4 Next Generation IntelR Optane Memory
IntelR Rapid Storage Technology — x2 and x4 PCIe* NVMe SSD — x2 and x4 Next Generation IntelR Optane Memory
SATA*3 Conn.
RTL8211F-CG
VGA Conn.
FAN1~4, A,B
RS-232 *2
MDI
Rear I/O
Rear I/O
RJ45 1G-Base
Note 1: This is a general block diagram and may not exactly represent the features
on your motherboard. See the previous pages for the actual specications of your
motherboard.
Note 2: The dual 10G LAN ports are only available on -TLN4F.
17
Super X12SCZ-TLN4F/QF/F User's Manual

1.2 Processor and Chipset Overview

The X12SCZ series comes in di󰀨erent model variations with di󰀨erent CPU support. The
X12SCZ-TLN4F/F supports Intel® Xeon W-1200 series, 10th Generation Core i9/i7/i5/i3, Pentium, and Celeron processors in an LGA1200 socket, while the X12SCZ-QF supports Intel 10th Generation Core i9/i7/i5/i3, Pentium, and Celeron processors in an LGA1200 socket. The X12SCZ-TLN4F/F features the W480E chipset and support for ECC and Non-ECC DDR4 UDIMM memory, while the X12SCZ-QF features the Q470E chipset and support for Non-ECC only. The X12SCZ series motherboards include the PCI Express 3.0 interface, four SATA 3.0 ports, IPMI 2.0, 12V DC power source, GPU add-on card power connector, dual 10GbE LAN option, HD Graphic outputs, and a combination of USB 2.0 and 3.2 ports. The motherboards also provide security-enhancing technologies such as Intel Software Guard Extensions (Intel SGX), Intel vPro, and Intel Trusted Execution Technology (TXT). The X12SCZ-TLN4F/QF/F
o󰀨ers exceptional system performance for entry server, data storage, network security,
embedded applications, and cloud computing platforms.
The Intel PCH W480E chipset in conjunction with the new Intel Xeon W-1200 series processor, and the Intel Q470E chipset in conjunction with the new Intel 10th Gen. Core i series supports
the following features:
Intel Rapid Storage Technology
Intel Rapid Storage Technology enterprise (Intel RST)
Support for Management Engine (ME)
Improved I/O capabilities to high-storage-capacity congurations
Intel Virtualization Technology (Intel VT) and Trusted Execution Technology (Intel TXT)
Intel Streaming SIMD Extensions 4.2 (Intel SSE4.2), Intel AVX2, and Advanced Encryption
Standard New Instructions (Intel AES-NI)
Intel 64 Architecture, Execute Disable Bit, Turbo Boost Technology 2.0, Hyper-Threading
Technology (Intel HT Technology)
PCI Express 3.0, SATA 3.0, USB 3.2
18
Chapter 1: Introduction

1.3 Special Features

Recovery from AC Power Loss

The Basic I/O System (BIOS) provides a setting that determines how the system will respond when AC power is lost and then restored to the system. You can choose for the system to
remain powered o󰀨 (in which case you must press the power switch to turn it back on), or
for it to automatically return to the power-on state. See the Advanced BIOS Setup section for this setting. The default setting is Last State.

1.4 System Health Monitoring

This section describes the health monitoring features of the X12SCZ-TLN4F/QF/F motherboard. The motherboard has an onboard System Hardware Monitoring chip that supports system health monitoring.

Onboard Voltage Monitors

An onboard voltage monitor will scan the voltages of the onboard chipset, memory, CPU, and battery continuously. Once a voltage becomes unstable, a warning is given, or an error
message is sent to the screen. The user can adjust the voltage thresholds to dene the
sensitivity of the voltage monitor.

Fan Status Monitor with Firmware Control

The system health monitor embedded in the BMC chip can check the RPM status of the cooling fans. The CPU and chassis fans are controlled via lPMI.

Environmental Temperature Control

System Health sensors monitor temperatures and voltage settings of onboard processors and the system in real time via the IPMI interface. Whenever the temperature of the CPU or
the system exceeds a user-dened threshold, system/CPU cooling fans will be turned on to
prevent the CPU or the system from overheating.
Note: To avoid possible system overheating, please be sure to provide adequate air-
ow to your system.
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Super X12SCZ-TLN4F/QF/F User's Manual

System Resource Alert

This feature is available when used with SuperDoctor 5® in the Windows OS or in the Linux environment. SuperDoctor is used to notify the user of certain system events. For example,
you can congure SuperDoctor to provide you with warnings when the system temperature, CPU temperatures, voltages and fan speeds go beyond a predened range.

1.5 ACPI Features

ACPI stands for Advanced Conguration and Power Interface. The ACPI specication denes a exible and abstract hardware interface that provides a standard way to integrate power
management features throughout a computer system, including its hardware, operating
system and application software. This enables the system to automatically turn on and o󰀨
peripherals such as CD-ROMs, network cards, hard disk drives and printers.
In addition to enabling operating system-directed power management, ACPI also provides a generic system event mechanism for Plug and Play, and an operating system-independent
interface for conguration control. ACPI leverages the Plug and Play BIOS data structures,
while providing a processor architecture-independent implementation that is compatible with appropriate Windows operating systems. For detailed information regarding OS support, please refer to the Supermicro website.

1.6 Power Supply

As with all computer products, a stable power source is necessary for proper and reliable operation. It is even more important for processors that have high CPU clock rates where noisy power transmission is present.
This motherboard accommodates a 24-pin ATX power supply. Although most power supplies
generally meet the specications required by the CPU, some are inadequate. In addition, one
12V 8-pin power connection is also required to ensure adequate power supply to the system.
Warning: To avoid damaging the power supply or the motherboard, be sure to use a power supply that contains a 24-pin and an 8-pin power connector. Be sure to con­nect the power supplies to the 24-pin power connector (JPW1), and the 8-pin power connector (JPV1) on the motherboard. Failure in doing so may void the manufacturer warranty on your power supply and motherboard.
Note 1: The X12SCZ Series motherboard alternatively supports an 8-pin 12V DC input power only at JPV1 for embedded applications. The 12V DC input is limited to 30A by design. It provides up to 360W power input to the motherboard. Please keep
the onboard power usage within the power limits specied above. Overcurrent power
us age may cause damage to the motherboard.
20
Chapter 1: Introduction
Note 2: Please connect both the 8-pin DC power at JPV1 to make sure the CPU re­ceives enough power for normal operation when using the ATX power supply.
It is strongly recommended that you use a high quality power supply that meets ATX power
supply Specication 2.02 or above. It must also be SSI compliant. (For more information,
please refer to the website at http://www.ssiforum.org/).

1.7 Serial Port

This motherboard supports two serial communication connections. COM headers 1 and 2 can be used for input/output. The UART provides legacy speeds with a baud rate of up to
115.2 Kbps as well as an advanced speed with baud rates of 250 K, 500 K, or 1 Mb/s, which support high-speed serial communication devices.
21
Super X12SCZ-TLN4F/QF/F User's Manual
Chapter 2
Installation

2.1 Static-Sensitive Devices

Electrostatic Discharge (ESD) can damage electronic com ponents. To avoid damaging your system board, it is important to handle it very carefully. The following measures are generally
su󰀩cient to protect your equipment from ESD.

Precautions

Use a grounded wrist strap designed to prevent static discharge.
Touch a grounded metal object before removing the board from the antistatic bag.
Handle the motherboard by its edges only; do not touch its components, peripheral chips,
memory modules or gold contacts.
When handling chips or modules, avoid touching their pins.
Put the motherboard and peripherals back into their antistatic bags when not in use.
For grounding purposes, make sure that your computer chassis provides excellent conduc-
tivity between the power supply, the case, the mounting fasteners and the motherboard.
Use only the correct type of onboard CMOS battery. Do not install the onboard battery
upside down to avoid possible explosion.

Unpacking

The motherboard is shipped in antistatic packaging to avoid static damage. When unpacking the motherboard, make sure that the person handling it is static protected.
22
Chapter 2: Installation

2.2 Processor and Heatsink Installation

Warning: When handling the processor package, avoid placing direct pressure on the label
area of the fan.
Important:
Use ESD protection.
Unplug the AC power cord from all power supplies after shutting down the system.
Check that the plastic protective cover is on the CPU socket and none of the socket pins
are bent. If they are, contact your retailer.
When handling the processor, avoid touching or placing direct pressure on the LGA lands
(gold contacts). Improper installation or socket misalignment can cause serious damage to the processor or CPU socket, which may require manufacturer repairs.
Thermal grease is pre-applied on a new heatsink. No additional thermal grease is needed.
Refer to the Supermicro website for updates on processor support.
All graphics in this manual are for illustrations only. Your components may look di󰀨erent.

Installing the LGA1200 Processor

1. Press the load lever down to release the load plate from its locking position.
Plastic Protective Cover
Load Plate
Load Lever
23
Super X12SCZ-TLN4F/QF/F User's Manual
2. Gently lift the load lever to open the load plate. Remove the plastic protective cover. Do not touch the CPU socket contacts.
3. Locate the triangle on the CPU and CPU socket, which indicates the location of Pin 1.
Holding the CPU by the edges with your thumb and index nger, align the triangle on
the CPU with the triangle on the socket. The CPU keys (the semi-circle cutouts) may also be aligned against the socket keys as a guide.
CPU / Socket Keys
4. Carefully lower the CPU straight down into the socket. Do not drop the CPU on the socket, or move it horizontally or vertically to avoid damaging the CPU or socket. Inspect the four corners of the CPU to make sure that the CPU is properly installed.
24
Chapter 2: Installation
5. Close the load plate, then gently push down the load lever into its locking position.
CPU properly installed
Load lever locked
into place
Note: You can only install the CPU in one direction. Make sure it is properly inserted
into the socket before closing the load plate. If it doesn't close properly, do not force it as it may damage your CPU. Instead, open the load plate again and double-check that the CPU is properly aligned.

Installing an Active CPU Heatsink with Fan

1. Locate the CPU fan header on the motherboard (FAN1: CPU FAN).
2. Position the heatsink so that the heatsink fan wires are closest to the CPU fan header and are not interfering with other components.
3. Inspect the CPU fan wires to make sure they are routed through the bottom of the heatsink.
4. Remove the thin layer of protective lm from the heatsink. CPU overheating may occur if
the protective lm is not removed from the heatsink.
5. Apply the proper amount of thermal grease on the CPU. If your heatsink came with a thermal pad, please ignore this step.
Thermal Grease
25
Super X12SCZ-TLN4F/QF/F User's Manual
6. Align the four heatsink fasteners with the mounting holes on the motherboard. Gently push down the fasteners in a diagonal order (Example: #1 and #2, then #3 and #4) into the mounting holes until you hear a click. Then lock the fasteners by turning each one 90° clockwise.
2
4
3
1
Push down
Lock
Unlock
7. Once all four fasteners are secured, connect the heatsink fan wire connector to the CPU fan header.
26
Chapter 2: Installation

Removing the Heatsink

Note: We do not recommend that the CPU or heatsink be removed. However, if you
do need to remove the heatsink, please follow the instructions below to remove the heatsink and prevent damage done to the CPU or other components.
1. Unplug the power connector from the power supply.
2. Disconnect the heatsink fan connector from the CPU fan header.
3. Gently press down each fastener cap and turn them 90°counter clockwise, then pull the fasteners upwards to loosen them.
4. Remove the heatsink from the CPU.
Lock
Pull up
Unlock
27
Super X12SCZ-TLN4F/QF/F User's Manual

2.3 Motherboard Installation

All motherboards have standard mounting holes to t di󰀨erent types of chassis. Make sure
that the locations of all the mounting holes for both the motherboard and the chassis match. Although a chassis may have both plastic and metal mounting fasteners, metal ones are highly recommended because they ground the motherboard to the chassis. Make sure that
the metal stando󰀨s click in or are screwed in tightly.

Tools Needed

Phillips
Screwdriver
(1)
MH8
AUDIO FP
JPAC1
PCH SLOT4 PCIe 3.0 X4 (IN X8)
JIPMB1
J18
JPME2
MH1
I-SATA3
I-SATA2 I-SATA1
SP1
I-SGPIO1
JMD1
JPCIE_SLT4
SRW4
SRW2
JPG1
JPT1
ART1
JBT1
SRW3
JRF1
COM1/2
JGP1
JTPM1
USB10/11 (3.2 10Gb)
BMC_HB_LED1
BAR CODE
SAN CODE
JMD2
Intel
W480/Q470
JPWR1
JWD1
BAR CODE
MH4
JBM1
JPCIE6
CPU SLOT6 PCIe 3.0 X16
JD1
FANB
JSMB1
FANA
BIOS LICENSE
JL1
JSD1
PCH SLOT7 PCIe 3.0 X4
MH5
I-SATA0
MH7
Phillips Screws
(8)
UID_LED1
UID SW
JPCIE_SLT7
BT1
+
BAR CODE
BAR CODE
BAR CODE
DP++1/2
JPL1
JPL3/4:LAN3/4 1-2:ENABLE 2-3:DISABLE
USB0/1
JPL2
USB2/3
J10G_PWR
JPTG1
USB4/5
DVI-D/VGA
FAN4
X12SCZ-QF
REV:1.01 DESIGNED IN USA
JF1:
ON
ON
X
X
FF
FF
OH
OH RST
RST
NIC1
NIC2 NIC1
NIC2 PWR
PWR
LED
LED
LED
LED
HDD
HDD
PWR
PWR
JF1
JLAN3/4
JVRM1
XNMI
NMIX
LED1
Stando󰀨s (8)
Only if Needed
USB6/7 (3.2 10G)
JLAN1/2
JBM2
FAN3
USB8/9(3.2 10G)
IPMI_LAN
DIMMA1
FAN2
MH3
JPV1
JPW1
DIMMB1
DIMMA2
JPH1
MH6
DIMMB2
MH2
FAN1
JPI2C1

Location of Mounting Holes

Note: 1) To avoid damaging the motherboard and its components, please do not use
a force greater than 8 lbf-in on each mounting screw during motherboard installation.
2) Some components are very close to the mounting holes. Please take precautionary measures to avoid damaging these components when installing the motherboard to the chassis.
28
Chapter 2: Installation

Installing the Motherboard

1. Install the I/O shield into the back of the chassis, if applicable.
2. Locate the mounting holes on the motherboard. See the previous page for the location.
3. Locate the matching mounting holes on the chassis. Align the mounting holes on the motherboard against the mounting holes on the chassis.
4. Install stando󰀨s in the chassis as needed.
5. Install the motherboard into the chassis carefully to avoid damaging other motherboard components.
6. Using the Phillips screwdriver, insert a pan head #6 screw into a mounting hole on the motherboard and its matching mounting hole on the chassis.
7. Repeat Step 5 to insert #6 screws into all mounting holes.
8. Make sure that the motherboard is securely placed in the chassis.
Note: Images displayed are for illustration only. Your chassis or components might
look di󰀨erent from those shown in this manual.
29
Super X12SCZ-TLN4F/QF/F User's Manual

2.4 Memory Support and Installation

Note: Check the Supermicro website for recommended memory modules. Important: Exercise extreme care when installing or removing DIMM modules to pre-
vent any possible damage.

Memory Support

The X12SCZ-TLN4F/F supports up to 128GB of ECC or Non-ECC DDR4 UDIMM memory with speeds of up to 2933MHz in four memory slots. The X12SCZ-QF does not support ECC memory. Refer to the tables below for the recommended DIMM population order and additional memory information.
DIMM Module Population Conguration
For optimal memory performance, follow the table below when populating memory.
Recommended Population (Balanced)
DIMMA1 DIMMB1 DIMMA2 DIMMB2 Total System Memory
4GB 4GB 8GB
4GB 4GB 4GB 4GB 16GB
8GB 8GB 16GB
8GB 8GB 8GB 8GB 32GB
16GB 16GB 32GB
16GB 16GB 16GB 16GB 64GB
32GB 32GB 64GB
32GB 32GB 32GB 32GB 128GB
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