Responsible for contents:
Bernard Kleine
(Marketing CM, Compound Microscopy, Product Management)
Holger Grasse
(Safety Officer according to MPG §30)In case of questions, please contact the hotline:
All rights to this documentation are held by
Leica Microsystems Wetzlar GmbH. Reproduction of text or illustrations (in whole or in part) by
print, photocopy, microfilm or other method (including electronic systems) is not allowed without express written permission from Leica Microsystems Wetzlar GmbH.
The term "Windows" may appear in the following
text without further identification. It is, however,
a registered trademark of Microsoft Corporation. The names of companies and products
used herein may be trademarks of their respective owners.
The instructions contained in the following documentation reflect state-of-the-art technology
and knowledge standards. We have compiled
the texts and illustrations as accurately as possible. Nevertheless, no liability of any kind may
be assumed for the accuracy of this manual’s
contents. Still, we are always grateful for comments and suggestions regarding potential mistakes within this documentation.
The information in this manual is subject to modification at any time and without notification.
13. Abbreviations and Pictograms ............... 99
14. Index ............................................................ 101
15. EU Declaration of Conformity ................. 104
6
1. Important Notes about this Manual
1. Important Notes about this Manual
Caution!
This operating manual is an essential component of the microscope, and must be read
carefully before the microscope is assembled, put into operation or used.
Text symbols, pictograms and their meanings:
(1.2)
p.20
→
This operating manual contains important instructions and information for the operational
safety and maintenance of the microscope and
accessories. It must therefore be kept safely for
future reference.
A separate manual is available on CD-ROM covering the operation of the Leica Application
Suite (LAS).
Numbers in parentheses, such as "(1.2)", correspond to illustrations (in the example, Figure 1,
Item 2).
Numbers with pointer arrows (for example
→ p.20), point to a certain page of this manual.
Caution!
Special safety instructions within this manual are indicated with the triangle symbol
shown here, and have a gray background.
Caution! The microscope and accessories can
!
*
be damaged when operated incorrectly.
Explanatory note.
Item not contained in all configurations.
7
2. Intended Purpose of the Microscope
2. Intended Purpose of the Microscope
The Leica DMI 6000 B microscope described in
these instructions is intended for biological routine and research applications. This includes the
examination of samples taken from the human
body to provide information on physiological or
pathological states or congenital abnormalities,
or determing the safety and compatibility with potential recipients, or monitoring therapeutic
measures.
The Leica DMI
of Leica’s proven inverted research microscopes. It is designed for cellular and tissue examination, micromanipulation and microinjection techniques, microdissection, and confocal
microscopy. The Leica DMI
universal deployment, all contrast methods such
as darkfield, brightfield, phase contrast, DIC, fluorescence, and modulation contrast are integral
to the microscope and can be adapted or
changed quickly and easily. Variable illumination
and imaging beam paths, as well as HCS optics,
modular accessories and a comprehensive
range of peripherals, complement the Leica DMI
6000 B inverted research stand.
6000 B is a further development
6000 B is suitable for
The above-named microscope complies with
the Council Directive 98/79/EEC concerning in
vitro diagnostics. It also conforms to the Council
Directives 73/23/EEC concerning electrical apparatus and 89/336/EEC concerning electromagnetic compatibility for use in an industrial environment.
Caution!
The manufacturer assumes no liability for
damage caused by, or any risks arising from
using the microscope for other purposes
than those for which it is intended or not using it within the specifications of Leica Microsystems Wetzlar GmbH.
In such cases the declaration of conformity
shall cease to be valid.
Caution!
This (IVD) device is not intended for use in
the patient environment defined by DIN VDE
0100-710. Neither is it intended for combining with medical instruments according to
EN 60601-1. If a microscope is electrically
connected to a medical instrument according to EN 60601-1, the requirements defined in EN 60601-1-1 shall apply.
8
3. Safety Notes
3. Safety Notes
3.1 General Safety Notes
This safety class 1 device is constructed and
tested in accordance with
EN 61010-2-101:2002,
EN 61010-1:2001,
IEC 1010-1:2001,
Safety regulations for electrical measuring, control, and laboratory devices.
In order to maintain this condition and to ensure safe operation, the user must follow the
instructions and warnings contained in this
operating manual.
Caution!
Caution!
The devices and accessories described in
this operating manual have been tested for
safety and potential hazards.
The responsible Leica affiliate or the main
plant in Wetzlar must be consulted whenever the device is altered, modified, or used in
conjunction with non-Leica components that
are outside of the scope of this manual.
Unauthorized alterations to the device or
noncompliant use shall void all rights to any
warranty claims!
9
3. Safety Notes
3.2 Electrical Safety
General specifications
Caution!
Leica CTR6000 Electronics Box
For indoor use only.
Supply voltage:
Frequency:
Power input:
Fuses:
For indoor use only.
Supply voltage:
Frequency:
Power input:
Fuses:
Ambient temperature:
Relative humidity:
Overvoltage category:
Pollution degree:
ebq 100 Supply Unit*
90-250V~
50-60 Hz
max. 290VA
T6.3 A
(IEC 60127-2/3)
15-35°C
max. 80% to 30°C
II
2
90-250V~
50-60 Hz
See CTR6000
See CTR6000
15-35°C
max. 80% to 30°C
II
2
Power plugs may only be plugged into an
outlet equipped with a grounding contact.
Do not interfere with the grounding function
by using an extension cord without a ground
wire. Any interruption of the ground wire inside or outside of the device, or release of
the ground wire connection, can cause the
device to become hazardous. Intentional
ground interruption is not permitted!
Caution!
Peripheral devices with their own or separate power supplies that are connected to
the microscope can have the same protective conductor potential by connecting them
to the ground screw on the back of the Leica
CTR6000 electronics box. For connections
without a ground connector, Leica Service
must be consulted.
For indoor use only.
Supply voltage:
Frequency:
Power input:
Fuses:
Ambient temperature:
Relative humidity:
Overvoltage category:
Pollution degree:
(See enclosed manual)
10
90-250V~
50-60 Hz
max. 155VA
2xT2A (IEC 127)
10-36°C
max. 80% to 30°C
II
2
Caution!
Never use any fuses as replacements other
than those of the types and the current ratings listed here. Using patched fuses or
bridging the fuse holder is not permitted. The
use of incorrect fuses may result in a fire
hazard.
Caution!
The microscope’s electrical accessory components are not protected against water.
Water can cause electric shock.
Caution!
Protect the microscope from excessive temperature fluctuations. Such fluctuations can
lead to the accumulation of condensation,
which can damage the electrical and optical
components.
Ambient temperature: 15-35°C.
Caution!
3. Safety Notes
Before exchanging the fuses or lamps, be
absolutely certain to switch off the main
power switch and remove the power cable.
• Left side ports (100%, 80%, or 50% transmission)
• Left side port dichroic splitting at 680 nm
• Right side ports (100%, 80%, or 50% transmission)
• Bottom port
Optional
• Top port with 2 switching positions
• 100% to eyepieces
• 50% to eyepieces/ 50% to port
14
4. Overview of the Instrument
Controls
Electronics Box
Leica CTR6000
Interfaces
•7 fixed control buttons for illumination and apertures
•7 variable function buttons behind the focus controls
•3 fixed control buttons for focus steps
•2 focus hand wheels
•7 buttons for fluorescence cubes and shutters
•4 buttons for magnification changers and ports
• SmartMove: ergonomic controller for x, y, z and 4 additional variable function buttons
• Separate control unit for all motorized and electronic elements of
the microscope such as:
• Objective turret
• Ffocus
• Ports
• Magnification changer
• Fluorescence
• Condenser
• Motorized stages
With
• Power supply for 100W halogen lamp
• Power supply for SmartMove
•2 x RS232C
•2 x USB
•4 x external/internal peripherals
Software Tools
• Leica Application Suite (LAS) for Windows
For:
• Microscope and camera configuration
• Microscope and camera control
• Image acquisition
TM
2000, XP with plug-ins
15
4. Overview of the Instrument
4.2 Glossary
The Stand
Four basic versions of the Leica DMI stand (DMI
3000 B, DMI 4000 B, DMI 5000 B, DMI 6000 B) are
available which can be combined into a wide
range of microscope variants.
The basic building blocks of the Leica
DMI6000 B stand are:
The individual variants and their components,
differences, and applications are described in
this manual. The function and performance of all
microscopy techniques and required accessories of the Leica DMI6000 B will be described in
detail in the section of this manual that covers
the operation of the microscope.
Tube
The tube and tube lens create the primary image
together with the objective.
The tubes are an integral part of the stand and
consist of a basic body and a binocular section.
The trinocular tube also features a photo/video
port. A switchable mirror diverts either 100% of
the light to the eyepieces or camera port, or
splits it, with 50% each going to the eyepieces
and camera port.
A Bertrand lens is also available as an option.
Eyepieces
The eyepieces create an enlarged, virtual image
of the actual intermediate image created by the
objective. The eyepiece serves as a magnifier in
this respect.
Intensity Controller
The stand contains a 12V 100 W transformer for
continuous regulation of the intensity via the intensity controller.
The intensity can be adjusted using the controls
(1.6).
Focus Wheel
The focus wheel allows quick, precise focusing
of the microscopic image. Focusing is realized
by the vertical travel of the objective turret, with
a total range of 9mm.
Incident Light-Fluorescence Unit
The stand features an integrated fluorescence
axis and a motorized filter cube changer with
6 positions.
Aperture Ddiaphragm
The aperture diaphragm determines the resolution, depth of field, and contrast of the microscopic image. The best resolution is obtained
when the apertures of the objective and the
condenser are roughly the same.
The aperture diaphragm in the illuminationlight path is not for setting the image brightness. This should be done only with the intensity controls or neutral filters.
Caution:
16
4. Overview of the Instrument
Condenser
The condenser is a lens system that gathers
light and projects it onto the specimen from
above. The condenser is designed for the utilization of the numerical aperture in the objective.
Condenser Height Adjustment
The markings of the transmitted-light column indicate the height to be set for the used condenser.
Stages and Accessories
The stage is designed to accommodate the
specimens to be observed. Mechanical and motorized 3-plate cross-stages are available for the
Leica DMI 6000 B.
Motorized Objective Turret and Objectives
The motorized objective turret is designed to accommodate the objectives. The L-objectives
with their long working distances especially
take into consideration the correction of varying
container bottom thicknesses.
All microscope objectives are usable, from
1.25:1 to 100 : 1 magnification. All objectives in
the Leica product range with a 25mm thread and
coverslip correction are compatible. For performance data on Leica objectives, please refer to
the most current valid objective lists available
from your Leica representative.
Transmitted Light Illumination Unit
The transmitted light illumination unit consists of
an illumination carrier and the transmitted light
illumination column. The transmitted light illumination carrier does not contain a lamp housing,
but a filter module for two swing-in filters and,
depending on the condenser used, a field diaphragm.
Filter
The filters are generally used to enhance the
contrast of the specimen and are installed in the
illumination carrier. A selection of various filters
can be interchanged as required.
Field Diaphragm
The field diaphragm is used to realize Koehler illumination.
Lamp Housing for Transmitted Light
The lamp housings 107/2 and 107 (both for 12V
100W halogen) are available for the Leica DMI
6000 B. For their descriptions and applications,
please refer to the section of this manual describing the use of the microscope.
The letter L indicates a lamp housing designed
for left-handed operation.
Lamp Housing for Incident Light
The 106 z L lamp housing (for halogen or xenon)
is available for the Leica DMI 6000 B. For their
descriptions and applications, please refer to
the section of this manual describing the use of
the microscope.
The letter L indicates a lamp housing designed
for left-handed operation.
Leica CTR6000 Electronics Box
The Leica CTR6000 electronics box contains the
power supply for the lamp and the circuit boards
required to control the motorized functions of
the stand.
17
4. Overview of the Instrument
18
17
1
14
Fig. 1Leica DMI 6000 B left view
1 Eyepiece
2 Eyepiece tube
3 Top port
4 Intermediate pupil interface
5 LeicaScreen
6 Light intensity
7 Field diaphragm
8 TL/IL switching
9 Aperture diaphragm
10 Focus wheel
16
2
15
3
4
5
678910111213
11 Variable function buttons
12 Right side port
13 Booster lens
14 Lamp mount
15 Condenser head
16 Condenser base
17 Field diaphragm
18 Transmitted light lamp housing
19 DIC objective prism disk
18
4. Overview of the Instrument
11
4
5
Fig. 2Leica DMI 6000 B right view
1 E-focus control buttons
2 Focus wheel
3 Variable function buttons
4 Opener for drawer
5 Drawer
6 Right side port
Fig. 3Leica DMI 6000 B front view
1 LeicaScreen
2 Front control panel
3 Port switching
4 Top port
5 Manual transmitted light filters
6 Field diaphragm centering
20
1
Fig. 3b SmartMove remote control module
1 Travel in x
2 Travel in y
3 Focus
Fig. 3a Front control panel
Fig. 4Overall view of Leica DMI 6000 B with SmartMove remote control module
4 Variable function buttons
(preassigned at factory)
4. Overview of the Instrument
3
1
2
4
21
5. Unpacking the Microscope
5. Unpacking the Microscope
The microscope is delivered in several packages.
The stand package contains the following components:
• Stand with integrated incident light axis,
objective turret and tube
• Illumination arm
• Specimen stage
• CD with Leica Application Suite (LAS)
software package
• Instructions and list of microscope presets
(identification sheet)
The system package contains the microscope's
accessories:
• Eyepieces
• Objectives
• Condenser
• Lamp housings with accessories
• Assembly tools
• Additional accessories such as filter cubes,
etc. depending on feature set
The Leica CTR6000 electronics box, the SmartMove remote control module and the ebq 100
supply unit are supplied in separate packages.
22
Please carefully compare the contents of the
delivery to the packing slip, delivery note, or invoice. We urgently recommend storing a copy of
these documents with the manual to ensure that
you have information on the time and scope of
delivery handy for subsequent orders or service
work.
Please make sure that no small parts remain in the
packing material. Parts of our packing material are
marked by symbols to simplify recycling.
First, carefully remove all components from
the transportation and packaging materials.
Do not put the instrument into operation in
the event of visible damage to the components or packing material.
Caution!
5. Unpacking the Microscope
Caution!
Do not connect the microscope or peripherals to an AC power source at this time
under any circumstances!
Installation Location
Work with the microscope should be performed
in a dust-free room, which is free of oil vapors
and other chemical vapors, as well as extreme
humidity. At the workplace, large temperature
fluctuations, direct sunlight, and vibrations
should be avoided. These may adversely affect
measurements and long-term observations.
Allowable ambient conditions
Temperature15-35°C
Relative humiditymaximum 80% up to 30°C
Note:
If at all possible, avoid touching the lens surfaces of the objectives. If fingerprints do appear on
the glass surfaces, remove them with a soft
leather or linen cloth. Even small traces of finger
perspiration can damage the surfaces in a short
time. See the chapter "Care of the Microscope"
p. 95, for additional instructions.
→
Microscopes in warm and warm-damp climatic
zones require special care in order to prevent
the build up of fungus.
See the chapter "Care of the Microscope"
→ p. 95, for additional instructions.
Electrical components must be placed at
least 10 cm away from the wall and away
from flammable substances.
Caution!
23
5. Unpacking the Microscope
Transport
For shipping or transporting the microscope and
its accessory components, the original packaging should be used.
As a precaution to prevent damage from vibrations, the following components should be disassembled and packaged separately:
• Unscrew the objectives.
• Remove the eyepieces.
• Remove the condenser.
• Remove the specimen stage.
• Remove the transmitted light arm.
• Remove the lamp housings.
• Remove the lamp housing mount.
• Disassemble the burner of 106 z lamp housing.
• Remove the filter cube.
• Remove all moving or loose parts.
24
6. Assembling the Microscope
6. Assembly
The microscope components are logically assembled in this order:
•Transmitted light illumination carrier
• DIC module and DIC objective prisms*
• Specimen stage
• Condenser with condenser head
• Eyepieces
• Objectives
•Transmitted light lamps
• Lamp housing mount (mirror housings)
• Incident light lamps
• Assembly of incident light turret disk*
• Polarizer and analyzer*
When using intermediate systems and optical
accessories, the sequence may vary.
In this case, read Chapter
"6.15 Optional Accessories" → p. 52.
6.1 Assembly Tools
If possible, the microscope should be assembled and set up with the assistance of Leica
sales or service personnel.
A small number of universal screwdrivers which
are included in the scope of delivery are required for assembly (Fig. 7).
6.2 Installation of the
Transmitted Light Illumination Carrier (DL)
Wipe the installation surface (8.3) with a dry
cloth. Tip the illumination carrier (8.1) back
slightly and install it so that the pin (8.2) engages
the groove in the support surface (8.4).
Set the DL illumination carrier upright and fasten
it with the 4 screws.
When fastening the transmitted light illumination carrier, do not hold it so as to ensure its optimal alignment with the optical axis.
The tilt angle of the illumination carrier can be
varied with the knurled screw (9.1) or fixed vertically. Connect the electronics cable to one of
the sockets, EXT1 - EXT4.
The transmitted light lamp housing for 12V 100W
halogen lamps is a separate component. For instructions on replacing the halogen lamp
→ Ch. 6.10, p. 41.
26
6. Assembly
6.3 Installation of the DIC Module
and DIC Objective Prisms
If your microscope is not equipped with DIC,
please continue with Chapter 6.4.
In the Leica DMI 6000 B microscope, the DIC
prisms are already installed in the DIC disk below the objective turret (Fig. 10b).
Proceed as follows when making changes to the IC
prism disk:
• Remove the front cover (Fig. 11) below the
objective revolver after releasing the socket
screws (Fig. 10a).
Fig. 10a Removing the front cover
Fig. 11 Front cover, DIC prism disk
• Insert the DIC prism disk (Fig. 10b) in its
receptacle and tighten the two socket
screws.
Note: insert the prism disk with the
electronics board facing down.
Replacing Individual IC Prisms:
• Release the two socket screws and remove
the prism disk.
• Place the prism against the stop pin (10b.3),
place the washer between the screw and the
prism, and tighten gently to prevent undue
tension. Insert the prism so that its identifying
letter, e.g. ID, is facing upward and is legible.
• After installing the prisms, replace the prism
disk into its receptacle.
Fig. 10b DIC objective prism turret (coded and motorized)
1 IC objective prism in frame
2 Identification letter (ID)
3 Orientation pin
Fig. 12 IC objective prism
1 Objective prism in frame
2 Screw and washer
1
2
321
27
6. Assembly
6.4 Installation of Specimen Stages
A wide range of specimen stages are available.
The most important are the following:
• Fixed stage (248mm x 204mm):
normal, heating and temperature-controlled
• Regular manual 3-plate cross-stage, positioning range: 83mm x 127mm
• Manual micromanipulation 3-plate cross-stage
positioning range: 40mm x 40mm
• Motorized micromanipulation 3-plate crossstage
positioning range: 40mm x 40mm
• Manual rotating stage
• Scanning stage IM 120 x 100
(motors on top)
• Scanning stage IM 120 x 100
(motors on bottom)
Fig. 14 Mechanical 3-plate stage
Fig. 15 Micromanipulation stage with attachable mechan-
ical stage
Fig. 13 Fixed stage (normal)
28
Fig. 16 3-plate micromanipulation stage
6. Assembly
The assembly of these stages is identical. The
stages are solidly attached to the microscope by
three screws. In the case of fixed stages, an attachable mechanical stage may be installed
(Fig. 18). These are supplied in a separate package.
Multiple-plate stages are supplied separately.
Like the fixed stages, these stages are mounted
as follows:
• If the screws for the stage are already in the
stand, remove them first. In most cases, the
screws will be found in the packing material
of the stand.
Caution!
!
The screw lengths may vary. When using
screws of different lengths, use the shorter of
the three screws in the front hole and the
equally long ones in the rear holes.
• Use a clean cloth to remove dust and packing
material residue from the stand’s contact
surface with the stage.
• Align the stage so that the pair of holes faces
back toward the illumination axis and the
single hole faces forward toward the tube.
• Align the mounting holes in the stage with the
holes in the support surface. If the holes are
covered, in the case of 3-plate cross-stages
or scanning stages, please shift the upper
stage plate until the opening becomes visible.
• First, tighten the single front screw with the
included 3mm hex screwdriver. Be sure to use
shortest of the three screws in the front
the
hole, as an excessively long screw can
interfere with the focus travel. (If you have a
rotating stage, please continue reading under
"Rotating Stage and Insert Frame for Coverslips").
• Finally, give the front screw a final firm
tightening.
Fixed Stage
Attachable mechanical stages that are designed
to accept a variety of culture dishes are also
available for fixed stages. These mechanical
stages may be attached to either side of the
fixed stage (Fig. 17).
Two screws are located at the underside (right
or left) of the attachable mechanical stage.
Tighten these screws in the threaded holes on
the underside of the fixed stage with the 3mm
hex screwdriver. Retighten these screws from
time to time after frequent use.
The attachable mechanical stage has been preadjusted in the factory. In the event that the attachable mechanical stage runs out of focus
when moving from right to left, this can be corrected by Leica’s technical service.
Next, remove one or more of the ordered insert
frames (Fig. 20) from their packaging and place
the insert frame into the precise retention system. The stage, the attachable mechanical
stage, and the insert frame are now ready for
use.
Some (not all) inserts are provided with self-adhesive scales to allow the coordinates to be
read.
Apply these scales to the recesses of the attachable mechanical stage.
Fig. 20 a, b, c
Inserts for attachable mechanical stage (micromanipulation
stage)
a
Fig. 19 a, b
Inserts for attachable mechanical stage (fixed stage)
30
a
b
b
c
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