Manual versionSoftware version Revision dateChanges
1.01.0June 2011First publication.
2.01.0September 2011Editorial corrections
3.02.0July 2012Hardware improvements.
Adjustments to reflect latest
software version (time indication
for running tests and disk space
indication).
3.12.1November 2013The TRL Check feature was
introduced. Minor textual
adjustments were made.
Edition noticeThe Cedex Bio instrument is a continuous random-access analyzer intended for the
determination of chemical and biochemical parameters in aqueous solutions. It is
optimized for small throughput workloads of approximately 20 samples per day,
utilizing photometric analysis and a unit for ion selective electrodes (ISE).
This manual is for users of the Cedex Bio instrument with software version 2.1.
Every effort has been made to ensure that all the information contained in this
manual is correct at the time of printing. However, Roche Diagnostics GmbH
reserves the right to make any changes necessary without notice as part of ongoing
product development.
Any customer modification to the instrument will render the warranty or service
agreement null and void.
Intended useThe Cedex Bio instrument is a continuous random-access analyzer intended for the
Document information 2
Contact address 2
Table of contents 3
Preface 5
How to use this manual 5
Online Help system 5
Conventions used in this manual 6
System DescriptionPart A
1Safety
Safety classification A–5
Safety information A–5
Data security A–10
Disposal recommendation A–11
Legal liability A–12
Safety labels A–13
2 Introduction to the instrument
Overview A–17
User interface A–20
Wizards A–21
Daily operation A–22
Maintenance A–33
System status A–34
3 Hardware
Covers and panels A–39
LEDs A–41
Main components A–43
Hardware overview A–44
Technical specifications A–65
Performing calibrations B–59
Performing QC B–68
Finishing the shift B–77
Logging off B–88
Shutting down the system and switching off
the instrument B–88
Using the barcode scanner B–89
6 Special operations
Deleting sample orders B–93
Deleting sample results B–94
Calibration B–95
Deleting QC results B–96
Lot handling B–98
Exporting data B–104
Importing data B–111
Preparing a new disk B–116
Assigning tests to test tabs B–119
Deleting bottle sets from the Inventory list B–120
Refilling printer paper B–122
Removing condensation water from the
reagent cooler B–124
Replacing the probe B–125
Connecting and disconnecting the external
fluid containers B–127
Adjusting the touchscreen B–131
Cleaning the touchscreen B–131
Daily operation E–17
Replacing ISE fluid bottles E–30
Replacing electrodes E–32
Cleaning the ISE tower off the instrument E–36
Cedex Bio System
14 ISE maintenance
Introduction E–41
ISE maintenance actions E–42
15 ISE troubleshooting
Introduction E–69
Safety E–70
List of ISE flags E–71
Reacting to error messages E–80
Glossary and IndexPart F
Glossary F–3
Index F–11
RevisionsPart G
18 Revisions
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4Operator’s Manual · Version 3.1
Cedex Bio System
Preface
The Cedex Bio Instrument is a continuous random-access analyzer intended for the
determination of chemical and biochemical parameters in aqueous solutions. It is
optimized for small throughput workloads of approximately 20 samples per day,
utilizing photometric analysis and a unit for ion selective electrodes (ISE).
This manual describes the Cedex Bio system features and general operational
concepts, and it provides operating, maintenance, and emergency procedures.
Parts B through D describe the instrument without using an ISE unit, ISE specific information is given in part E.
How to use this manual
oKeep this Operator’s Manual in a safe place to ensure that it is not damaged and
remains available for use.
oThis Operator’s Manual should be easily accessible at all times.
Online Help system
To help you find information quickly, there is a table of contents at the beginning of
the manual and each chapter. In addition, a complete index can be found at the end.
The Cedex Bio instrument has a context-sensitive online Help feature to aid in its
operating. “Context-sensitive” means that wherever you are located within the
Cedex Bio software, choosing Help () displays Help text relating to that area of
the software. The online Help offers a quick and convenient way of finding
information, such as explanations of screens and dialog boxes and on how to perform
particular tasks.
Roche Diagnostics
Operator’s Manual · Version 3.15
Conventions used in this manual
Visual cues are used to help locate and interpret information in this manual quickly.
This section explains the formatting conventions used in this manual.
SymbolsThe following symbols are used:
SymbolUsed for
aStart of procedure
oList item
e
hCall-up (software navigation path)
Color of display item on the screen
Cross-reference
Tip
Safety alert
Cedex Bio System
Electrical and electronic equipment marked with this symbol are
covered by the European directive WEEE.
The symbol denotes that the equipment must not be disposed of in
the municipal waste system.
ButtonsWhen used for identification purposes, a generic form of the buttons is used, without
color or navigation indicators.
ScreenshotsThe screen representations shown in this publication are for illustrative purposes
only. The screens do not necessarily show valid data.
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AbbreviationsThe following abbreviations are used:
AbbreviationDefinition
CfasCalibrator for automated systems
DILDiluent
DMData management
DRAMDynamic random access memory
e.g.Exempli gratia – for example
EMCElectromagnetic compatibility
ENEuropean standard
i.e.Id est – that is to say
IECInternational Electrical Commission
ISEIon selective electrode
LEDLight-emitting diode
LISLaboratory information system
LLDLiquid level detection
n/aNot applicable
QCQuality control
REFReference solution for ISE unit
ROMRead only memory
SDStandard deviation
SRAMStatic random access memory
TRLTest range low (lower limit of measuring range)
Before you attempt to use the Cedex Bio instrument, you must be fully familiar with
the following symbols and their meanings:
Warning
Indicates a hazardous situation which, if not avoided, could result in death or serious
injury.
Caution
Indicates a hazardous situation which, if not avoided, may result in minor or moderate
injury.
Notice
Indicates a hazardous situation which, if not avoided, may result in property damage.
Safety information
Transport
Electrical safety
Before operating the Cedex Bio instrument, it is essential that you both read and
understand the safety information listed below.
Read all Roche safety notices carefully and make sure you understand them.
Injury from heavy loads
You may injure your hands, fingers, or back when putting the analyzer in place. Carry the
analyzer according to the transport instructions.
Electrical shock by electronic equipment
Do not attempt to work in any electronic compartment. Installation, service, and repair
must only be performed by authorized and qualified personnel.
Electrical safety
Connect the analyzer to grounded power outlets only (IEC protection class 1). All peripheral devices that are connected to the Cedex Bio instrument must comply with safety
standard IEC 60950 for information technology equipment, or with IEC 61010-1, UL 610101 for laboratory use instruments.
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WARNING
WARNING
WARNING
WARNING
WARNING
Safety information
Optical safety
Loss of sight
The intense light of the LEDs may severely damage you eyes. Do not stare into the LEDs.
Scanning equipment using LED technology is covered by the international standard IEC
60825-1 LED Safety: Class 1.
Mechanical safety
Personal injury or damage to the analyzer due to contact with instrument
mechanism
Do not touch moving parts during instrument operation.
Instrument covers
Personal injury or damage to the analyzer due to contact with instrument
mechanism
Keep all covers closed, operate them as instructed on the screen.
Operation and maintenance
Personal injury or damage to the analyzer due to contact with instrument
mechanism
Do not touch any parts of the instrument other than those specified. During operation and
maintenance of the instrument, proceed according to the instructions.
Biohazardous materials
Infection by biohazardous materials
Contact with samples containing material of human origin may result in infection. All materials and mechanical components associated with samples of human origin are potentially
biohazardous.
oBe sure to wear protective equipment. Take extra care when working with protective
gloves; these can easily be pierced or cut, which can lead to infection.
oIf any biohazardous material is spilled, wipe it up immediately and apply disinfectant.
oIf waste solution contacts your skin, wash it off immediately with water and apply a dis-
infectant. Consult a physician.
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WARNING
WARNING
WARNING
WARNING
Safety information
Waste
Infection by waste solution
Contact with waste solution may result in infection. All materials and mechanical components associated with the waste systems are potentially biohazardous.
oBe sure to wear protective equipment. Take extra care when working with protective
gloves; these can easily be pierced or cut, which can lead to infection.
oIf any biohazardous material is spilled, wipe it up immediately and apply disinfectant.
oIf waste solution contacts your skin, wash it off immediately with water and apply a dis-
infectant. Consult a physician.
Reagents and other working solutions
Injury through reagents and other working solutions
Direct contact with reagents, cleaning solutions, or other working solutions may cause
personal injury.
When handling reagents, exercise the precautions required for handling laboratory
reagents, observe the cautions given in the package insert, and observe the information
given in the Safety Data Sheets available for Roche Diagnostics reagents and cleaning
solutions.
Skin inflammation caused by reagents
Direct contact with reagents may cause skin irritation, inflammation, or burns.
When handling reagents, be sure to wear protective equipment and observe the cautions
given in the package insert.
Installation
Incorrect results or damage to the analyzer due to wrong installation
Follow the specified installation instructions carefully.
Environmental conditions
Incorrect results or damage to the analyzer due to heat and humidity
Use the instrument indoor only.
e
For details on the required environmental conditions, see Environmental conditions on
page A-65.
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NOTICE
WARNING
WARNING
WARNING
Safety information
Power interruption
Data loss or damage to the system due to voltage drop
By a power failure or momentary voltage drop the operation unit or software of this system
may get damaged or data loss may occur. Use only uninterruptible power supply.
Electromagnetic devices
Malfunction of instrument and incorrect results due to interfering electromagnetic
fields
Devices that emit electromagnetic waves may cause the instrument to malfunction. Do not
operate the following devices in the same room where the system is installed:
oMobile phone
oTransceiver
oCordless phone
oOther electrical devices that generate electromagnetic waves
Approved parts
Third-party software
Class B FCC rule compliance
This equipment has been tested and found to comply with the limits for Class B digital
device, pursuant to part 15 of the FCC Rules. These limits are designed to provide reasonable protection against harmful interferences when the equipment is operated in a residential area. However, this equipment generates, uses, and can radiate radio frequency
energy and, if not installed and used in accordance with the present manual, may cause
harmful interference to radio communications.
The electromagnetic environment should be evaluated prior to operation of the device.
Malfunction of instrument and incorrect results due to nonapproved parts
Use of nonapproved parts or devices may result in malfunction of the instrument and may
render the warranty null and void. Only use parts and devices approved by Roche Diagnostics.
Malfunction of instrument and incorrect results due to third-party software
Installation of any third-party software that is not approved by Roche Diagnostics may
result in incorrect behavior of the system. Do not install any nonapproved software.
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WARNING
CAUTION
WARNING
WARNING
NOTICE
Safety information
Operator qualification
Incorrect results or damage to the analyzer due to wrong operation
Operators are required to have a profound knowledge of relevant guidelines and norms as
well as the information and procedures contained in the Operator’s Manual.
oDo not carry out operation and maintenance unless you have been trained by Roche
Diagnostics.
oCarefully follow the procedures specified in the Operator’s Manual for the operation
and maintenance of the system.
oLeave maintenance that is not described in the Operator’s Manual to trained service
representatives.
oFollow standard laboratory practices, especially when working with biohazard material.
Operation over an extended period of time
Fatigue due to long hours of operation
Looking at the monitor screen over an extended period of time may lead to fatigue of your
eyes or body. Take a rest for 10 to 15 minutes every hour to relax. Avoid spending more
than 6 hours per day looking at the monitor screen.
Cross contamination of sample
Incorrect results due to carryover
Traces of analytes or reagents may be carried over one test to the next. Take adequate
measures (e.g. sample aliquoting) to safeguard additional testing and to avoid potentially
false results.
Insoluble contaminants in sample
Incorrect results and interruption of analysis due to contaminated samples
Insoluble contaminants in samples may cause clogging or pipetting volume shortage and
deterioration in measurement accuracy. When loading samples on the instrument, make
sure that samples contain no insoluble contaminants such as fibrin or dust.
Spillage
Malfunction due to spilled liquid
Any liquid spilled on the instrument may result in malfunction of the instrument. If liquid
does spill on the instrument, wipe it up immediately and apply disinfectant.
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CAUTION
Data security
Data security
Unauthorized access and data loss due to malicious software and hacker attacks
Portable storage media can be infected with and transmit computer malware, which may
be used to gain unauthorized access to data or cause unwanted changes to software.
The Cedex Bio instrument is not protected against malicious software and hacker attacks.
The customers are responsible for IT security of their IT infrastructure and for protecting it
against malicious software and hacker attacks. Failure to do so may result in data loss or
render the Cedex Bio instrument unusable.
Roche recommends the following precautions:
oAllow connection to authorized external devices only.
oEnsure that all external devices are protected by appropriate security software.
oEnsure that access to all external devices is protected by appropriate security equip-
ment.
oDo not copy or install any software on the Cedex Bio instrument unless it is part of the
system software or you are instructed to do so by a Roche service representative.
oIf additional software is required, contact your Roche service representative to ensure
validation of the software in question.
oDo not use the USB ports to connect other storage devices unless you are instructed to
do so by official user documentation or a Roche service representative.
oExercise utmost care when using external storage devices such as USB flash drives,
CDs, or DVDs. Do not use them on public or home computers while connecting to the
Cedex Bio instrument.
oKeep all external storage devices in a secure place and ensure that they can be
accessed by authorized persons only.
e
For further information, contact your Roche service representative.
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WARNING
WARNING
Disposal recommendation
Disposal recommendation
Malfunction of instrument and incorrect results due to software modifications by
the customer
The Cedex Bio instrument uses open source software. For details see document CedexBio
System License Notes.
The Cedex Bio instrument has been designed to be operated with the unmodified software as shipped. The user assumes full responsibility for changing any part of the open
source software, which excludes any liability of Roche Diagnostics Ltd.
This program is distributed without any warranty; without even the implied warranty of
merchantability or fitness for a particular purpose. For details see document CedexBio System License Notes.
The portions of used open source software are part of MIKRAPs CPU-X168LCD/NET board
support package and may be obtained from Mikrap AG (info@mikrap.ch).
All electrical and electronic products should be disposed of separately from the
municipal waste system. Proper disposal of your old appliance prevents potential
negative consequences for the environment and human health.
Disposal label
Electrical and electronic equipment marked with this symbol are covered by the European
directive on waste electrical and electronic equipment (WEEE) 2002/96/EC.
The symbol denotes that the equipment must not be disposed of in the municipal waste
system.
Disposal of external components
External components such as the scanner and the ISE power supply, which are marked
with the crossed-out wheeled bin symbol, are covered by the European Directive
2002/96/EC (WEEE).
These items must be disposed of via designated collection facilities appointed by government or local authorities.
For more information about disposal of your old products, contact your city office, waste
disposal service or your local service representative.
Disposal of the instrument
The instrument must be treated as biologically contaminated hazardous waste. Final disposal must be organized in a way that does not endanger waste handlers. As a rule, such
equipment must be sterile before it is passed on for final disposal.
For more information contact your local service representative.
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1SafetyCedex Bio System
Legal liability
Constraint
It is left to the responsible laboratory organization to determine whether control unit
components are contaminated or not. If contaminated, treat in the same way as the
instrument.
Legal liability
It is the users’ sole responsibility to determine whether they activate the TRL Check
feature, and if they do so to define the lower measuring range in accordance with the
country specific requirements. If the users activate the TRL Check feature, they are
also responsible for validation of the ranges they define.
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Cedex Bio System1Safety
A
B
Safety labels
Safety labels
Read all safety labels on the instrument and equipment.
The following illustration shows where on the instrument labels are displayed.
A This label on the electrode block of the ISE unit indicates that
there is a danger of hazardous situations arising within the vicinity
of this label, which may result in death or serious injury. The rele-
vant laboratory procedures on safe use must be observed.
Figure A-1Safety labels on the Cedex Bio instrument
In addition to safety labels on the instrument, there are safety notes in the
corresponding parts of the Operator’s Manual.
These safety notes give more detailed information about potentially hazardous
situations that may arise during daily operation or when carrying out maintenance
procedures.
When working with the instrument, be sure to observe both the safety labels on the
instrument and the safety notes in the Operator’s Manual.
B This label on the main cover indicates that there are potential bio-
hazards within the vicinity of this label, which may result in death
or serious injury.
The relevant laboratory procedures on safe use must be observed.
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Safety labels
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Cedex Bio System2 Introduction to the instrument
Table of contents
Introduction to the instrument
What you need to know before you start
In this chapter, you will find basic information on the features that are relevant for
working with the Cedex Bio instrument.
System status ..................................................................................................................A–34
Chapter
2
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Table of contents
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Cedex Bio System2 Introduction to the instrument
WARNING
Overview
Overview
The Cedex Bio instrument is a continuous random-access analyzer intended for
metabolite analysis in mammalian cell cultures and microbial fermentation. The
Cedex Bio instrument is a low throughput, bench top instrument used in
manufacturing and quality control of pharma biotech environments. Core test
parameters cover sodium, potassium, glucose, lactate, lactate dehydrogenase,
ammonia, glutamine, and glutamate.
Only trained personnel working in a professional laboratory environment may
operate the Cedex Bio instrument.
Incorrect results or damage to the analyzer due to wrong operation
Operators are required to have a profound knowledge of relevant guidelines and norms as
well as the information and procedures contained in the Operator’s Manual.
oDo not carry out operation and maintenance unless you have been trained by Roche
Diagnostics.
oCarefully follow the procedures specified in the Operator’s Manual for the operation
and maintenance of the system.
oLeave maintenance that is not described in the Operator’s Manual to trained service
representatives.
oFollow standard laboratory practices, especially when working with biohazard material.
FeaturesThe Cedex Bio instrument offers small laboratories the following advantages:
oHigh analytical performance
The same bulk reagents, 12-wavelength photometer and disposable cuvettes
generate results that are highly correlated to other cobas instruments.
oEfficient operation
Cooled, exchangeable reagent disks ensure economical reagent use; disposable
cuvette segments allow for easy cuvette loading and removal.
oHigh reliability, low maintenance
Innovative "low impact" instrument design and software-driven preventive
maintenance improves up-time and reduces maintenance costs.
oAdaptable user interface
The built-in color touchscreen, process-driven software, and reagent and sample
barcode entry adapts to users of different skills and access levels.
oHigh safety standards
Built-in safety devices, such as level detection, tube bottom detection, cuvette
quality control, and ISE clot detection anticipate potential hazards during
operation.
oFlexible sampling
Eight on-board sample positions accommodate virtually any type of sample
carrier, and enable continuous sample placing and removal during operation.
oData management
Bidirectional RS-232 and USB ports, on-board thermal printer, and drivers offer
the latest in data management capabilities.
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A
LNM
BD
I
F
E
G
H
O
J
K
C
Overview
Measuring principlesMeasurements are performed by means of an absorbance photometer and an ISE
(ion selective electrode) module that uses ion selective potentiometry.
A first look at the instrument
A Left service flap (covers wash station, ISE
tower, tubing)
B Main cover (covers rotor, reagents, cuvettes,
photometer unit)
C Main switch
D Transfer head (holds probe)
E Rear service flap (covers computer boards,
power supply, degasser)
F Sample area LED
G Sample area (space for 8 sample tubes)
Figure A-2The Cedex Bio instrument
H Touchscreen
IFluid connectors
J Right service flap (covers photometer unit,
sample area)
K Printer panel
L Main cover LED
M Paper slot
N Release button for printer panel
O USB connector (not shown)
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Overview
Principles of operation
The Cedex Bio main instrument uses absorption photometry for determining the
amount of absorbance in a fluid. The absorbance is used to calculate the
concentration in the solution.
Loading the sampleThe operator identifies the sample, places it on the instrument, and defines the order.
(If you work with a host system, the order is defined automatically.)
Measuring processThe measuring process for each test consists of forty regular cycles, each lasting 18
seconds. In each of these cycles, a measurement is taken, irrespective of what other
actions take place during this cycle. The application definitions determine what is
done in which cycle, and they also define which results are taken into account for the
result calculation.
With each cycle, a new test can be started.
The basic process works as follows:
1. Checking the cuvette.
A measurement is taken to check the quality of the cuvette.
2. Pipetting reagent (R1) to the cuvette.
After each pipetting action, the system performs a wash cycle to minimize carryover. During this cycle, the probe and tubing are flushed with water and cleaner.
3. Wait.
The fluid needs to reach the prescribed temperature. Such a phase can last several
cycles.
During the wait cycles, activities for other tests are performed.
4. Pipetting the next fluid.
Typically, this would be the sample. The details are defined in the application
definitions.
5. Wait.
6. Pipetting the next fluid.
7. Wait.
8. And so on.
Calculating the resultsThe test result is calculated on the basis of the photometric measurement results.
During this process, various checks are performed to ensure that the whole
measuring process was technically correct. If values are above or below predefined
limits, the test result is flagged.
The results are stored on the system. This includes both the forty measurement
results (raw data) and the calculated test result.
Sequence of processingFor a given sample, the tests are processed in the order defined by the time required
for their processing (number of cycles), starting with the one that takes the longest.
This order can be altered manually by defining a specific process sequence list.
Status of the measuring processAt any stage of the measuring process, the user can check its status on the screen.
Result data managementThe system provides storage space for the results of one working day. For backup
purposes, the results must be exported to an external storage device once a day.
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E
G
F
D
C
B
A
User interface
User interface
The Cedex Bio instrument is equipped with a touchscreen, an on-screen keyboard
and four global action buttons. LEDs and acoustic signals let you know when it is safe
to add or remove samples, reagents and other fluids.
With buttons and other display items, “traffic light” color coding is used: Green
means OK, yellow: watch out, you need to do something, and red means that your
intervention is required for processing to continue.
The screens have a clear and consistent layout and are easy to use. The topics are
divided in the proven work areas: Overview for order and fluid handling, Workplace
for result handling and details on orders, and Utilities for administration tasks.
e
For details on the user interface, see Chapter 4 Software.
The following is an example of a screen. It contains the full range of display items.
A The status line displays the system status.
B Tabs represent the major work areas.
C The headline characterizes the content or
function of the screen. If the screen is part of
a sequence of screens (wizard), the headline
tells you where you are within this sequence.
D The working area displays the main content
of the screen.
E The buttons vary depending on the content
of the working area and the screen position
within a series of steps (wizard).
Figure A-3Example of a screen
F The Help button leads to concise information
that is relevant to the current screen and
situation.
G The global action buttons represent the
functions that are permanently available:
Start, Stop, Alarm, Line Feed. The LEDs next
to them point to their status.
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Wizards
Wizards
Screens help you perform your tasks. If not all steps of a task can be performed from
one screen, the workflow is realized as a sequence of screens, a so-called wizard.
Cedex Bio wizards do not usually force you to perform a task at a certain stage, they
just make your work easier.
e
For details on workflows, see Workflows and wizards on page A-72.
When intervention is requiredOn the screen, there are several methods of telling when your intervention is
required:
oButtons and texts are color coded.
Everything is fine.
To ensure smooth operation, you need to perform some task.
The current process or action has not started yet or stopped. You need to
do something for it to start or continue.
oScreens can contain instructions. For example the text may ask you to place the
sample on the sample area or to remove a reagent bottle from the reagent disk.
oMessages inform you about the status of current actions.
oA permanent alarm monitor alerts you to events you should know about.
WizardsThere are three major wizards: Prepare wizard, Orders wizard, and End Shift wizard.
With most tasks that involve more than one step, such as exchanging reagent or other
fluid bottles, you are supported by wizards.
Prepare wizardThe Prepare wizard guides you through the tasks that need to be performed at the
beginning of a shift. When this wizard is done, the system is ready for processing
orders.
Orders wizardThe Orders wizard guides you through the process of creating and changing orders.
End Shift wizardThe End Shift wizard guides you through the tasks that need to be performed at the
end of the day or to prepare the instrument for handing over to another operator.
Individual tasks can be performed outside the wizards
Most tasks that make up a workflow can be performed without using a wizard.
If you perform a task independently, you first need to navigate to the appropriate screen
and then start the task from there; whereas if you use a wizard, the appropriate screen is
displayed automatically.
Using the wizards also ensures that all necessary steps are performed and in the right
order.
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Daily operation
Daily operation
Overview
Daily operation includes the routine tasks that are required to prepare and monitor
the system, and to analyze samples.
When you switch on the system, it performs several checks to make sure that all
preconditions are met, for example that all covers are closed or that there are cuvettes
available. It then performs self-tests to ensure that all modules function properly.
At the end of the startup phase, the screen is updated to display the current status of
the system.
The following table gives an overview of the tasks you might need to perform during
daily operation.
TaskStepsNavigation
Starting the system1. Switch on the system.
1
Logging on the systemOverview > Logon
2
Preparing the systemStart the Prepare wizard.Overview > Prepare
3
Defining ordersStart the Orders wizard.Overview > Order (or Overview > STAT)
4
Monitoring the progressn/aOverview
5
With wizard As individual steps
1. Check the external fluid containers.Overview > >
2. Perform the maintenance actions
that are due.
3. Load the reagent disk.Overview >
4. Check the reagents.Overview >
5. Check the cuvettes.Overview >
6. Perform mixingOverview > > test >
7. Perform calibrations that are due.Workplace > Calibrations > >
1. Identify the sample.n/a
2. Select the tests.n/a
3. Place the sample.n/a
4. Start the run.
Utilities > Maintenance
Validating results1. View results.n/aWorkplace > Result Review
6
2. Handle flagged results.n/aWorkplace > Result Review >
... > Repeat
... > Rerun
3. Accept results.n/aWorkplace > Result Review > >
Accept
Table A-1Overview of the daily operation tasks
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Daily operation
TaskStepsNavigation
With wizard As individual steps
Performing calibrations
7
Performing individual
calibrations
Performing
all due calibrations
Performing controls
8
Performing
Default QC
Performing an individual
QC measurement
Performing all
due QC measurements
Table A-1Overview of the daily operation tasks (Continued)
1. Start the wizard.Workplace > Calibrations >
2. Select the test.n/a
3. Prepare and place the calibrators.n/a
4. Start the calibration.
5. Validate the calibration results.Workplace > Calibrations >
6. Remove the calibrators.
1. Start the wizard.Workplace > Calibrations >
2. Select all tests with due calibrations.
n/a
or
Select all tests with calibration due
within the forecast period.
3. Prepare and place the calibrators.n/a
4. Start the calibration.
5. Validate the calibration results.Workplace > Calibrations >
6. Remove the calibrators.
1. Start the wizard.Overview > Order >
2. Select a control and place the tube.
n/a
Repeat until there are no controls left
on the screen.
3. Start the QC measurement.
4. Validate the QC results.Workplace > QC Status >
5. Remove the controls.n/a
1. Start the wizard.Workplace > QC Status >
2. Select a test.n/a
3. Select a control and place the tube.
n/a
Repeat until there are no controls left
on the screen.
4. Start the QC measurement.
5. Validate the QC results.Workplace > QC Status >
6. Remove the control.
1. Start the wizard.Overview > Order >
2. Select a control and place the tube.
n/a
>
Repeat until there are no controls left
on the screen.
3. Start the QC measurement.
4. Validate the QC results.Workplace > QC Status >
5. Remove the controls.
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A
BC
Daily operation
TaskStepsNavigation
With wizard As individual steps
Finishing the shift1. Check for unfinished orders.Workplace > Orders
9
Choose > Not Finished
2. Check for non-validated results.Workplace > Result Review
Choose > Not Accepted
3. Check for non-transmitted results.
(If working with a host system only.)
4. Start the End Shift wizard.Overview > End Shift
5. Perform the daily backup.Utilities > Export > Database
6. Export the full results.Utilities > Export > Results
7. Clean up the database.Workplace > Orders >
8. Perform the maintenance actions
that are due.
9. Replace cuvettes.Overview >
10. Check the external fluid containers.Overview > >
11. Remove the reagent disk (if last
shift).
12. Log off the system.Overview > button with your user name
13. Shut down the system and switch off
the instrument (if last shift).
Table A-1Overview of the daily operation tasks (Continued)
n/an/a
Workplace > Result Review
Choose > Not Sent to Host
Workplace > Result Review>
Workplace > QC Status >
Workplace > QC History >
Workplace > Calibrations >
Utilities > Maintenance
Overview > >
Reagent and diluent handling
A Reagent disk
B Reagent bottle with barcode
Figure A-4Equipment for reagent handling
Reagent diskOn the instrument, the reagents are stored on a reagent disk. It provides space for 27
bottles, allowing up to 14 reagent sets to be installed on the disk, assuming that most
tests need two reagents. Extra diluents and cleaners are also loaded on the reagent
disk.
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Daily operation
You can work with up to eight different reagent disks on one Cedex Bio instrument.
You always load and remove bottles while the disk is on the instrument. (The system
needs to know exactly what is loaded on the disk.)
When you finished running tests, you can remove the whole reagent disk, place it in a
reagent disk container, and store it in a refrigerator.
BottlesCedex Bio reagents, diluents and extra cleaners are provided in uniform bottles. They
are supplied with two dimensional barcodes and placed on the reagent disk with their
cap removed.
ChimneysChimneys are bottle inserts that reduce evaporation. For reagents that are especially
sensitive to concentration changes, Roche recommend using chimneys on the
reagent bottles.
To generally reduce evaporation, you may use chimneys on all reagent bottles.
Reagent setUp to three reagents can be required to perform a certain test. These reagents are
handled in reagent sets. You can define more than one reagent set for a test, but only
one can be active.
A reagent set is defined as soon as its first bottle is loaded. From this moment on,
whenever you remove or replace a reagent, you do so for all reagents of the set.
Each diluent or cleaner bottle is treated as a separate reagent set.
Volume detectionFor each reagent set, the number of available tests is continuously calculated.
Figure A-5Remaining tests indication
Periodic mixingReagents may have a mixing interval defined. This interval is checked by the system
every 30 minutes, and mixing is performed without removing the reagent bottles
from the reagent disk.
For a reagent set that contains more than one reagent for which mixing is defined, the
shortest interval of all reagents of the set is used for all reagents.
Tests are blocked if any reagent they use requires mixing.
DiluentsBoth, system water and dedicated diluents are used. System water is kept in the
external water container, dedicated diluents are supplied in reagent bottles and
placed on the reagent disk.
CleanersBoth, a system cleaner and dedicated cleaners can be used. The system cleaner is kept
in the external cleaner bottle, dedicated cleaners are supplied in reagent bottles and
placed on the reagent disk.
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Calibration
Calibration is the process that establishes, under specified conditions, the
relationship between values indicated by the analytical instrument and the
corresponding known values of an analyte.
Periodic calibration is required because the concentration of reagents can change
over time.
Reagents are typically calibrated with a two-point calibration, measuring the
predefined value of a multicalibrator and of system water. Some reagents are
calibrated using a set of calibrators.
On the Cedex Bio instrument, reagents are handled as sets of up to three reagents.
(You always load and unload all reagents of a set.) As a consequence, all reagents
(bottles) of a set are calibrated when performing calibration.
The system checks when calibration is due.
Each reagent set must have accepted calibration results to be available for use in tests.
When a calibration is due depends mainly on two definitions, the calibration type
and the calibration sequence.
Calibration type
The calibration types Set and Lot define the manner in which the system determines
whether there is a valid calibration result for a particular reagent set.
Set calibrationSet calibration results are valid for the calibrated set only. They can be generated from
any reagent set.
Lot calibrationLot calibration results are valid for the reagent set they were calibrated with and for
all subsequent reagent sets of the same lot. Usually, lot calibrations are generated by
calibrating the first reagent set of a new lot. There can only be one accepted lot
calibration result for the reagents of a given lot.
Let us suppose that you place the first reagent set of a new lot and calibrate it straight
away. Let us further assume that subsequent control measurements suggest that a
new calibration is required. Within the first 24 hours of placing a set on the system,
you can recalibrate it, and possibly existing lot calibration results of this set are
superseded. When this period has elapsed you can no longer change the lot
calibration results. (To generate new lot calibration results, you would have to delete
the existing results and then calibrate a new reagent set.)
Lot calibration is relevant if you work with the calibration sequence [Each Lot and Interval].
The following table illustrates the two calibration types in an example.
Assumptions:
oSequence: Each Lot and Interval.
oInterval: 5 days.
(Note that the interval (re)starts when a set is calibrated as a result of the interval
expiring or a new lot being started.)
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Day Trigger/EventTaskResult used Set Cal. typeCal. Usage
1NA1. Place first reagent set of new lot.
2. Calibrate set L1/1.
2Reagent empty.1. Remove set L1/1.
2. Place new set L1/2.
Reagent empty.Replace set whenever it is empty.Result 1SetCurrent
5Interval expired.Calibrate current set L1/n.Result 2L1/n
6Reagent empty.Place new set L1/n+1.Result 1L1/n+1
8Reagent empty.
New lot.
Reagent empty.Place new set L2/2.Result 3L2/2
10Interval expired.Calibrate current set L2/n.Result 4L2/n
11Reagent empty.Place new set L2/n+1.Result 3L2/n+1
Table A-2Example for set change and calibration types
1. Remove set L1/n+1.
2. Place new set, which is the first set of a new lot.
3. Calibrate set L2/1.
Result 1L1/1LotCurrent
Result 1L1/2
L1/1
L1/n-1
L1/n
Result 3L2/1
L1/1
L1/n+1
L2/1
L2/n-1
L2/n
Set
Lot
Set
Set
Set
Set
Lot
Lot
Set
Set
Lot
Set
Set
Set
Set
Current
-
Current
Obsolete
Current
Obsolete
Current
Obsolete
Obsolete
Current
-
Current
Obsolete
Current
Obsolete
Calibration sequence
No IntervalYou perform calibration whenever you think fit. Use this value if you are sure that the
Interval OnlyYou perform calibration only when the interval has expired.
Each Lot and IntervalYou perform calibration whenever the fist reagent of a new lot is loaded and then
Each Set and IntervalYou perform calibration whenever a new reagent is loaded and when the interval has
The calibration sequence is an application definition. It defines the manner in which
the system determines when a calibration is due.
Roche recommend not to change the calibration sequence.
The calibration interval defines the on-board stability of a reagent.
One of the following sequences applies to each reagent set:
reagent is stable until it is empty and you replace it with a new one. Calibration is due
whenever a new reagent set is loaded on the instrument.
each time the interval has expired.
In this case, the interval is related to the date when the lot calibration was generated,
and it (re)starts whenever you calibrate a reagent set (as a result of interval expiry or
starting a new lot).
You can turn off the interval check by defining its duration as 0 (zero).
expired.
The interval starts again whenever you calibrate a reagent set because the interval had
expired or a new lot was started.
You can turn off the interval check by defining its duration as 0 (zero).
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Daily operation
Calibration status of a set
Each reagent set has one of the following calibration statuses:
CU(current) denotes that the set is on board and that its calibration results are currently
used.
OB(obsolete) denotes that the set’s calibration results are no longer used.
This status applies for example to the following situations:
oThe set was removed and it is empty.
oThe set was removed and it is not empty. It was removed more than 30 days ago.
SB(standby) indicates that the set’s calibration results are not currently used.
This status applies for example to the following situations:
oA new set was loaded and calibrated while an identical set was still in use (pre-
calibration).
oThe set was removed not more than 30 days ago and it is not empty.
Calibration result storage
Validating calibration results
Calibration procedures
The current and up to five obsolete calibration results are stored on the system. If
there are more than five obsolete calibration results, the oldest obsolete calibration
results are automatically deleted as part of the daily end of shift activities.
Applications define checks for ranges and limits. If these are exceeded, the results are
flagged.
Each new calibration result has to be validated. If flags were generated, you must
determine their cause and decide whether to accept the result, rerun the calibration
or continue using the old calibration results.
You can automatically accept unflagged results and results with flags that are
contained in a specific list of flags that should be ignored.
e
See Editing the acceptable flags list on page B-160.
There are three basic procedures for performing calibration:
oCalibrating all reagent sets that need calibrating
oCalibrating all reagent sets that will need calibrating during the forecast period
oCalibrating individual reagent sets
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Forecast periodThe forecast period is a configurable period of time. Calibrations that fall due within
this period will be performed collectively.
e
See Calibration on page B-165.
Typically you would set this period to fit your shift length, for example 8 hours. This
would enable you to prepare the instrument before the work shift starts and so avoid
having to interrupt sample processing for performing calibrations.
PrecalibrationAt any given time, there is only one accepted calibration result for each test. You can,
however, install and precalibrate one reserve reagent set. This is done, for example, to
ensure continuous sample processing.
Quality control (QC)
QC is performed at regular intervals to check the integrity of the whole measuring
system. For each test, up to three controls are defined. The results are compared
against predefined ranges or values and then interpreted accordingly.
ControlA control is a sample that has been measured using all tests it is associated with, in
order to define the ranges and values that determine the correct functioning of the
instrument. This is typically done both for the normal and the pathological analyte
concentration.
When QC is dueWith regards to when it needs to be performed, QC is divided in the following types:
oQC After Cal
The QC measurement is due after calibration of the test.
oInterval QC
QC is due whenever its interval has expired. QC measurements of this type are
performed in a batch, typically once or twice a day.
oDefault QC
QC is performed at certain times during routine operation. This is done to fit in
with laboratory processes and procedures.
Ways of performing QCWith regards to how QC is performed, the following methods are provided:
oDefault QC
Default QC is an automated process for performing multiple QC measurements
at the time when you define the QC orders. This is the ideal method if you want to
perform QC at certain times and days.
This method only applies to tests whose controls are defined to be performed as
part of Default QC. Therefore, if you intend to work with the Default QC
function, you need to configure the tests accordingly.
Default QC follows a streamlined procedure where the necessary QC orders are
automatically defined as soon as you identify a control. An order is defined for
each test for which this control is defined, provided the test is currently active on
the system. A wizard helps you select the controls, and a placement list supports
you in preparing and loading the controls.
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oInterval QC
This method applies to tests whose controls have an interval defined.
Interval QC is a process that is suitable both for performing a single QC
measurement and for performing all QC measurements that are due. You can
select all tests that require QC simply by pressing a button. (This selection also
reflects QC of the type QC After Cal.) A wizard helps you select the controls, and
a placement list supports you in preparing and loading them.
Validating QC resultsEach new QC result has to be validated. If flags were generated, you must determine
their cause and decide whether to accept or ignore the result.
You can automatically accept unflagged results and results with flags that are
contained in a specific list of flags that should be ignored.
e
See Editing the acceptable flags list on page B-160.
If you ignore a QC result you exclude the result from further QC result calculations
such as QC History statistics.
Sample handling
You can place up to eight sample tubes on the sample area.
A Sample area LED. A green LED indicates that you should place a tube, a blinking yellow LED
that you should keep clear of the sample area.
Figure A-6Sample area with sample tubes
Sample typesThe Cedex Bio instrument can process aqueous samples from mammalian and
bacterial cell cultures and fermentation.
Incorrect results due to inadequate sample preparation
Specimen containing clots may obstruct the probe. Specimen containing bubbles or foam
may cause level detection errors and air pipetting. Consequently, incorrect results may be
generated.
Take adequate care when preparing the samples.
Incorrect results due to insufficient fluid
Insufficient fluid may lead to inaccurate pipetting and consequently to incorrect results.
Always fill the tubes with enough fluid that at least the defined dead volume of fluid is left
when pipetting is complete.
e
See Tubes on page A-53.
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Daily operation
Sample tubesThe Cedex Bio instrument can use both primary and secondary tubes (cups).
You can use any type of primary tube, as long as their dimensions lay within
prescribed limits. Roche recommend using approved cups only.
e
See Tubes on page A-53.
Probe damage due to not removing primary tube caps
The probe is not designed to pierce tube caps. It can get damaged when trying to pierce
tube caps.
Always remove the caps of primary tubes before placing them on the instrument.
Sample IDThe sample ID is an identifier of up to 23 alphanumeric characters that is unique
within a whole organization. It identifies the sample and is also used for host
communication.
Sample IDs are defined either by scanning a barcode or by typing them manually.
Because there is limited space when displaying lists on screens, Roche recommend to
limit the ID to 13 characters.
Sample barcodeYou can use sample tubes with or without barcode.
Removing sample tubesYou can remove sample tubes as soon as pipetting is complete.
Order handling
Order ModeThe order mode reflects the way in which you organize the tests on the test selection
DilutionPre-dilution is used when performing calibration.
Post-dilution is used when measuring samples.
(The dilution factor is part of the application definition and therefore does not need
to be defined by the operator.)
screen.
Choose Easy if the reagents fit on one or two reagent disks and you work with one
test panel on the screen (You can fit up to 25 tests and profiles on this panel).
Choose Full if you distribute the reagents across several (up to eight) reagent disks
and if you predominantly work with specific groups of tests. You can assign up to 20
tests and profiles to each panel (tab).
Order IDThe order ID is an identifier of up to 23 alphanumeric characters that is unique
within the laboratory. The order ID identifies the order and links it to the sample.
Order and sample IDs are often identical. Using separate IDs makes sense when
working with a host system.
Order IDs are defined either by scanning a barcode or by typing them manually.
Because there is limited space when displaying lists on screens, Roche recommend to
limit the ID to 13 characters.
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Host connectivityThe Cedex Bio instrument can be connected to an external laboratory information
system (LIS) and a host computer for downloading order information and uploading
results.
If the instrument is connected to a host system, the following setups can be
configured:
oDownloading order information
When you identify a sample using the barcode scanner, the appropriate order
information is automatically assigned to the order on the system. (The order
information was downloaded previously.)
oPerforming host queries
When you identify a sample using the barcode scanner, a query is sent to the host,
asking for the order information of the sample in question. This information is
then downloaded to the Cedex Bio instrument and automatically assigned to the
sample on the system.
oTransmitting results
You can have results automatically transmitted to the host as soon as they are
accepted.
Routine ordersRoutine orders are normally defined on the Overview tab. The software guides you
through the process of assigning the tests to the sample and placing the sample tube
on the instrument.
STAT ordersSTAT (short turn around time) orders are handled in the same way as routine orders,
except that their tests are processed next, irrespective of the scheduling of routine
order tests.
Defining ordersThere must be at least one free sample tube position when defining an order. You are
guided by the software when ordering the tests and placing the samples.
There can be only one order for each test and sample.
Modifying ordersThe process for changing an order is similar to that of defining it. You first identify
the sample and then change the tests. You can change an order as long as its
processing has not yet started.
It is always possible to add a further test to an existing order.
Deleting ordersAt the end of a shift, you should delete all orders that are defined on the system. This
is to free storage space for the next shift. Deleting the orders is an integral part of the
End Shift wizard. (Deleting an order also deletes the corresponding sample results.)
You can export the data to a USB stick and store them on a computer.
Controlling the runControlling the execution of test runs is done via the global action buttons.
Press to start the run.
Press to stop the run.
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Maintenance
Results
You can check the results on the screen as soon as they are calculated.
UnitsResults are normally given in your lab units. The units can be configured.
FlagsResult flags are test-specific. They indicate that the limit of an internal check was
exceeded or not reached.
System flags point to the status of the result within the process of analysis; for
example, they tell you that the result has not been accepted or that is has not been
transmitted to the host successfully.
Printing resultsYou can print all or selected results on the built-in printer.
Validating resultsAll results need to be validated (result accepted, test rerun or repeated).
Result flags help you identify critical results and point to possible actions that need to
be taken.
Each test must have accepted calibration results; tests whose associated calibration
results are not accepted cannot be performed.
Ratio resultsThe user can manually define ratios. Ratio results are handled like any other sample
result, with the exception that they cannot be accepted by the user. They are
automatically accepted if all their constituent results are accepted.
Repeating and rerunning testsIf a result is flagged, you may decide to run a test again. You can either perform
exactly the same test (Repeat) or perform it with a different predefined dilution
(Rerun).
Storing resultsThe Cedex Bio instrument is designed to hold the sample results of one day’s
analyzing. Therefore, you need to back up the data regularly to an external medium.
(Backing up results is an integral part of the End Shift wizard.)
The QC results of the previous and the current months are stored on the system.
Up to five calibration results are stored on the system for each test.
Maintenance
Completing maintenance actions correctly and on time helps to ensure smooth and
uninterrupted operation of your instrument.
Maintenance schedulingThe Cedex Bio instrument facilitates performing the maintenance actions in bundles
at the times that suit your laboratory work processes. To that purpose, you can define
in the configuration settings one day of the week as your maintenance day.
e
For information on scheduling maintenance actions, see Scheduling maintenance actions
on page B-158.
All maintenance actions can be performed any time.
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System status
IntervalFor most maintenance actions a fixed maintenance interval is defined. (You cannot
change this interval.) This is the basis upon which the system calculates the date when
the actions need to be performed.
The interval timers and counters are reset whenever you confirm that the
maintenance action has been performed.
Maintenance actions without predefined intervals are performed whenever
necessary, or they are triggered by another maintenance action.
Due dateThe due date is the last possible maintenance day. This is the date you see when you
check the status of maintenance actions.
Ensuring smooth operationPerforming all due maintenance actions during the daily Prepare or End Shift phase
ensures that routine operation does not have to be interrupted for performing
maintenance actions.
System status
The Cedex Bio instrument provides several means of indicating the status of the
various parts and processes:
oColor coded LEDs on the instrument inform you when and when not to open
covers or place sample tubes.
e
See Color interpretation for LEDs on page A-117.
oThe colors of buttons inform you whether you need to intervene.
e
See Color concept on page A-72.
You can check the meaning of a button using the online Help .
oButtons on the Overview tab lead to detailed information on the status of selected
processes and hardware items.
oMessages on the screen provide information on individual tasks and events.
oThe text in the Status line provides information on the status and activities of the
analyzer and photometer unit.
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System status
The following system statuses are defined:
StatusComment
StandbyThe user and host interfaces remain active, as do the reagent
cooling system, fluid system, and the cuvette heating.
MaintenanceA maintenance action is being performed. The system is not
available for performing tests.
DiagnosticsA system diagnostics action is being performed. The system is
not available for performing tests.
OperatingProcessing is in progress.
Power UpAfter switching on, the system performs initialization and
functional test.
Power DownRegular shutdown is in progress.
StoppedProcessing has stopped. User intervention is required to allow
the system to resume regular operation.
E-StoppedThe system has performed an emergency stop (E. Stop). This
could be due to hardware failure or because any of the safety
devices have requested an emergency stop.
Table A-3System statuses
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Table of contents
Hardware
The parts and how they work
In this chapter, you will find information on the main hardware components of the
Cedex Bio instrument.
In this chapter
Covers and panels ......................................................................................................... A–39
The following figure shows the removable panels and the lids that can be opened.
A Left side panel
B Left service flap
C Main cover
D Transfer head cover
Figure A-7The Cedex Bio instrument
Transfer head coverProvides access to:
oTransfer mechanism
oProbe
Shut down the system and switch off the instrument before you open this cover.
Left service flapProvides access to:
oWash station
oTubing
oInternal waste tank
oInitialization plate
Handle as instructed during maintenance actions, or shut down the system and
switch off the instrument before handling it.
E Rear service flap
F Right side panel
G Right service flap
H Printer panel
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Covers and panels
Main coverProvides access to:
oRotor
oReagent disk
oCuvettes
oReagent bottles
oPhotometer unit
You open this cover whenever you need to handle cuvettes, reagent bottles, or the
reagent disk. A green LED indicates that you should place an item, a yellow LED that
you should not open the main cover.
To open the cover, press the release button at the underside of the front of the cover.
When you should close the cover an acoustic signal is sounded and the
on the System Status screen
Rear service flapProvides access to:
oComputer boards
oPower supply
oTransfer unit
oDegasser
This flap should be opened by service representatives only.
Shut down the system and switch off the instrument before you open this cover and
remove the two side panels before opening this flap.
Right side panelProvides access to:
oSyringe assembly
Remove this panel as instructed during maintenance actions or shut down the system
and switch off the instrument before you remove it.
Right service flapProvides access to:
oPhotometer unit
oSample area
oTouchscreen
oData management computer
system icon
turns red.
Open this panel as instructed during maintenance actions or shut down the system
and switch off the instrument before you open it.
Printer panelProvides access to:
oPrinter paper.
You can open this flap any time as long as the printer is not printing.
To open the panel, press the release button.
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B
A
C
LEDs
LEDs
LEDs are placed on key positions on the Cedex Bio instrument. They inform you
whether you can perform certain actions.
Interpreting the LED colors
A Sample area LED
B Global button LEDs (from top: Start LED,
Stop LED, Alarm LED)
Figure A-8The Cedex Bio instrument
LEDColorMeaning
Main cover LED
OffNo activities in this area. You can open the main
C Main cover LED
cover.
User intervention is required, for example you are
expected to place or remove a bottle.
The system is performing some action. Do not
handle the cover.
An acoustic signal is sounded when the cover is open while the system is
in Operating state. You can adjust the volume (Utilities >
Configuration > System > Volume).
Sample area LED
OffNo activities in this area. You can remove sample
tubes.
You are expected to place a sample tube.
BlinkingThe transfer head is approaching. Do not place
your hand or any object in the sample area.
Start LED
OffYou cannot start the measuring process.
You can start the measuring process.
Table A-4LEDs and their meaning
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LEDs
LEDColorMeaning
Stop LED
Alarm LED
Table A-4LEDs and their meaning
OffPressing does not have any effect.
Pressing leads to the various stop options.
OffThere are no unconfirmed alarm messages.
There is at least one unconfirmed alarm message.
You need to deal with it as soon as possible.
There is at least one unconfirmed alarm message.
You need to deal with it immediately, processing
may not be able to continue unless you do so.
An acoustic signal is sounded when an alarm is generated. You can
adjust the volume (Utilities > Configuration > System > Volume).
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J
K
ABCDE
F
I
G
H
Main components
Main components
The following figure illustrates the main components of the Cedex Bio instrument.
A Rotor
B Transfer unit
C Photometer unit
D PCB main board
Figure A-9Main hardware components
E Degasser
F Sample area
G Display
H Syringe assembly
RotorProvides a cooled area for reagents (cooling assembly) and a heated channel for
cuvettes. It moves the containers to the correct position for loading, removal,
pipetting, and measuring.
Transfer unitPipettes sample, reagent, and other fluids from their source to target containers such
as cuvettes or the wash station.
Photometer unitContains the absorbance photometer used for making absorbance measurements.
PCB main boardControls the instrument hardware.
IFront USB port
J External fluid rack
K Printer
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A
Hardware overview
Fluid system (not shown)Transports all fluids around the instrument, including sample, reagent, calibrator,
control, diluent, cleaner, system water, and waste.
Syringe assemblyPerforms the aspiration and dispensing of fluids. This includes the supply of water
and cleaner to clean the probes in the wash station after every pipetting action, which
prevents carry-over between tests.
DegasserRemoves possible air bubbles from the system water.
Sample areaEight positions for holding sample tubes. This area is also used for placing
calibrators, controls, and auxiliary fluids.
DisplayThe touchscreen provides the user interface for controlling and managing the
Cedex Bio instrument.
Front USB portThis port is used for the USB stick when backing up data or loading data on the
system.
Hardware overview
Sample area
The sample area provides eight positions for placing sample tubes. You can place
primary and secondary tubes.
e
See Tubes on page A-53.
A The LED indicates that the transfer tower is approaching or that you should place a sample
tube.
Figure A-10Sample area with sample tubes
Place the samples when instructed by the system to do so. For calibrators, the system
tells you on which position to place them, with the other fluids, you can choose any
free position.
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Hardware overview
Fluid system
The fluid system consists of all the valves, pumps, tubing, syringe, fluid sensors, water
and waste containers, the wash station, and the probe. It transports all fluids around
the instrument, including sample, reagent, calibrator, control, diluent, cleaner,
system water, and waste. The fluid system also delivers the correct amounts of fluids
to the cuvettes.
A Wash station
B Transfer head (with probe)
C Pumps
D Degasser
E Syringe assembly
Figure A-11Fluid system
F Internal waste tank
G Cleaner bottle (red cap)
H Water container (white)
IWaste container (yellow)
To prevent overflow of the internal waste tank when the system is in Standby status, the
waste is periodically pumped to the external waste container. (Condensation can build up
in the cooling assembly while the system is in Standby status.)
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Probe and syringe
Syringe assembly
A Fluid sensor
B Probe
Figure A-12Probe and syringe
C Syringe
The probe is connected by tubing to:
oThe syringe to ensure the pipetting of the required amounts of fluid.
oThe external water container and cleaner bottle to ensure supply of fresh water
and cleaner.
e
See maintenance action Clean the probe manually on page C-12.
See maintenance action Deproteinize the probe on page C-10.
See Replacing the probe on page B-125.
The syringe assembly controls the aspiration and dispensing of fluids. It also controls
the supply of water and cleaner to clean the probes in the wash station after every
pipetting action, which prevents carry-over between tests.
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Hardware overview
Wash station
Figure A-13Wash station
The probe is washed after each pipetting. It is lowered in the wash station and then
cleaner is pumped through the probe to wash it in and outside. Next water is pumped
through the probe to flush away the cleaner.
The wash station is connected by tubing to the internal waste container.
External fluid connectors
The three external fluid containers must be properly connected before you switch on
the Cedex Bio instrument.
A Water connector
B Cleaner connector with protective sleeve
Figure A-14External fluid connectors
C Waste connector
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Transfer unit
The transfer unit moves the probe to the correct positions for all pipetting and
cleaning actions.
The following figure shows the major parts of the transfer unit.
A Transfer head
B Probe holder carriage
Figure A-15Major elements of the robotic transfer unit
C Transfer X guide rail
Transfer headThe transfer head moves horizontally (along the X-axis); the probe moves up and
down (Z-axis), and it performs a rotational movement for mixing the cuvette and
reagent bottle content.
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Transfer head arrestWhen the transfer head is obstructed in its horizontal movement, it immediately
stops. All pipetting and processing actions stop.
A Mixing motor
B Transfer Z motor
C Probe holder
Figure A-16Transfer head
D Probe
E Mixer movement axis
Mixing motorThe mixing motor is mounted on the carriage. When running, it generates a circular
movement of the probe. This movement is used for mixing the content of cuvettes
and reagent bottles.
ProbeThe probe has a flat tip. This is required for tube bottom detection. Because such a
probe cannot pierce a bottle cap, all bottles must be placed on the instrument with
their caps removed.
Level detectionA sensor detects when the probe enters a fluid. On the basis of this level, the system
establishes whether there is enough fluid to perform the scheduled pipetting action.
Tube Bottom detectionA physical sensor is activated as soon as the probe touches the bottom of a sample
tube.
This mechanism also works when the probe touches an object outside the tube. In
both cases, probe action stops and an appropriate alarm message is generated.
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Fluid containers
The following table shows which container is used for which fluid:
FluidContainer(s)Position
SampleTubeSample area
ControlTubeSample area
CalibratorTubeSample area
DiluentReagent bottleReagent disk
System cleanerExternal cleaner bottleExternal fluid rack
CleanerReagent bottleReagent disk
ReagentReagent bottleReagent disk
WaterBottleExternal fluid rack
WasteBottleExternal fluid rack
Table A-5Fluid containers, what they are used for and where
The term tube includes all kinds of tubes, as long as their dimensions lay within prescribed
limits. It also includes secondary tubes (cups). See Tubes on page A-53.
Waste containers
Internal waste tankThe internal waste tank collects the waste from the wash station and the ISE unit, if
A Tubing adapter
B External waste container
Figure A-17Waste container
C Internal waste tank
this is used. It also collects the condensation from the cooling assembly in the rotor.
The internal waste tank is connected by tubing to:
oExternal waste container
oWash station
oReagent cooler (condensation)
oISE unit
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External waste containerThe yellow external waste container is placed on the external fluid rack. It is designed
to be washed and reused.
Because the system periodically performs wash actions, an external waste container
must be connected at all times. Therefore, when you empty the waste container, you
immediately replace it with the spare container and then empty the original
container. (The instrument is supplied with a spare waste container.)
There is no active level monitoring for the external waste container, but you are
notified if the external waste container has not been emptied for more than one day.
The external waste container is connected by tubing to the internal waste tank.
e
See Connecting and disconnecting the external fluid containers on page B-127.
See Checking the status of the external fluid containers on page B-15.
See maintenance action Clean the water and waste containers on page C-16.
Water container
The whitewater container is positioned on the external fluid rack. Attached to the
cap is a suction tube, which is equipped with a water filter.
There is no active level monitoring for the water container, but you are notified if the
water container has not been refilled for more than one day.
The water container is designed to be washed and refilled.
A Tubing
B Container
Figure A-18Water container
C Water inlet filter
The water container is connected by tubing to:
oWash pump
oSyringe assembly
oProbe
e
See Connecting and disconnecting the external fluid containers on page B-127.
See Checking the status of the external fluid containers on page B-15.
See maintenance action
See maintenance action Replace water inlet filter on page C-19.
Clean the water and waste containers on page C-16.
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Cleaner bottle
The cleaner bottle is positioned on the external fluid rack. It is designed to be
replaced when empty.
Level monitoring for the cleaner bottle is based on the number of cleaning and
pipetting actions that were performed.
A Tubing adapterB Cleaner bottle
Figure A-19Cleaner bottle
When delivered, the bottle has a white cap. During installation, this is replaced by a
red cap with tubing attached to it (tubing adapter).
The cleaner bottle is connected by tubing to:
oSyringe assembly
oProbe
e
See Connecting and disconnecting the external fluid containers on page B-127.
See Checking the status of the external fluid containers on page B-15.
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Hardware overview
Reagent bottles
The Cedex Bio instrument works exclusively with reagent bottles
that are equipped with a two-dimensional barcode.
Each bottle holds up to 20 mL of fluid. The actual volume depends
on the test.
Place the bottles on the reagent disk as instructed by the software.
Reagents are handled in reagent sets. A set consists of up to three
reagents. You always load and replace all bottles of a set.
Tubes
Chimneys
Chimneys are bottle inserts that reduce evaporation.
For reagents that are especially sensitive to concentration changes,
Roche recommend using chimneys on the reagent bottles.
To generally reduce evaporation, you may use chimneys on all
reagent bottles.
Incorrect results due to declining reagent quality
If the application definitions (see package insert) recommend the use of chimneys, the
corresponding calibration intervals apply to conditions when working with chimneys.
Roche recommend using chimneys whenever this is recommended on the test insert.
The Cedex Bio instrument can use both primary and secondary tubes (cups).
You can use any type of primary tube, as long as their dimensions lay within
prescribed limits.
oMaximum height (including secondary tube): 102 mm
oMinimum height: 70 mm
oMaximum outside width: 16.3 mm
oMinimum outside width: 11.8 mm
Incorrect results due to insufficient fluid
Insufficient fluid may lead to inaccurate pipetting and consequently to incorrect results.
Always fill the tubes with sufficient fluid that at the end of the pipetting process at least the
dead volume of fluid is left.
e
See Tubes on page A-53.
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Hardware overview
Incorrect results due to inappropriate tube and cup placement
Inappropriate tube and cup placement may lead to inaccurate pipetting and consequently
to incorrect results.
Make sure that the primary tubes are placed centrally and perfectly vertically in the holders
in the sample area and that they are inserted firmly.
Make sure that secondary tubes are placed centrally on the primary tubes and that they
rest fully on them.
Probe damage due to not removing primary tube caps
The probe is not designed to pierce tube caps. It can get damaged when trying to pierce
tube caps.
Always remove the caps of primary tubes before placing them on the instrument.
The following table lists a few typical tubes that are suitable, and it gives the dead
volume for each of them.
Tube nameDead volume
13 x 75 mm500 μL
13 x 100 mm500 μL
16 x 75 mm700 μL
16 x 100 mm700 μL
Table A-6Typical examples of suitable tubes
Cuvettes
Roche recommends using sample cups because they need much lower dead volume
compared to primary tubes. The following table lists recommended cups.
Cup nameDead volumeSample volumePlacement
1.5 mL reaction tube100 μL1.5 mLUsing adapter cups
Roche Diagnostics
Standard false bottom
tube
Table A-7Typical examples of suitable tubes
75 μL 2.5 mLDirectly on sample area
All optical measurements are made using the same transparent
plastic containers, called cuvettes. Samples are automatically
transferred from a sample tube to the cuvettes on the cuvette ring.
Cuvettes are disposable to eliminate carry-over.
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Cuvette segments
Each segment holds 10 cuvettes.
Handling cuvettes
A Segment handle
B Cuvette segment holding individual cuvettes
Figure A-20Cuvette segment
C Cuvettes
Cuvettes are supplied in boxes containing cuvette sets. Each set contains a number of
cuvette segments. This way, the cuvettes can easily be handled without touching
them.
Loading and removing cuvettes is guided by the system software. When handling is
required, the rotor moves the cuvette segments to the cuvette port, where you can
load or remove them. You handle one segment at a time. Cuvette segments are placed
in the cuvette ring of the rotor.
e
See Preparing cuvettes on page B-28.
Incorrect results due to scratched or soiled cuvettes
Scratches and impurities on the cuvettes distort the measurements.
Do not touch the cuvettes and make sure they do not touch other items when handling
them.
A Hold the segment by its handle. Make sure not to touch the cuvettes.
Figure A-21Handling a cuvette segment
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Reagent handling
Loading and removing reagents is guided by the system software. When handling is
required, the rotor moves the bottles to the reagent port, where you can load or
remove them. You handle one reagent bottle at a time. Reagent bottles are placed on
the reagent disk.
e
See Preparing the reagents on page B-22.
Rotor
Figure A-22Handling a reagent bottle
The rotor provides the following features:
oSpace for up to 27 reagent bottles (on the reagent disk)
oSpace for up to 60 cuvettes (in the cuvette ring)
oA cooled environment for reagents (reagent cooler)
oA temperature controlled environment for samples (cuvette ring)
oA synchronized transport mechanism to move reagent bottles and cuvettes to the
pipetting, loading, and measuring positions.
A Reagent disk
B Reagent cooler
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Figure A-23Main rotor elements
C Temperature controlled cuvette ring (not
visible)
D Cuvette segment
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Rotational movementThe bottles and cuvettes are positioned in a manner that they can be moved to the
various positions by a rotational movement. There are positions for loading and
removal (reagent and cuvette ports), pipetting, and measuring.
A Pipetting positionsB Reagent port
Figure A-24Reagent port on the reagent disk
Reagent disk
The reagent disk holds up to 27 reagent bottles. It is designed to be handled as one
unit, including the bottles. When not used on the instrument, the reagent disk is
placed in a container and stored in a refrigerated place.
Figure A-25Reagent disk
Damage to the reagent disk
The reagent disk is designed to handle reagents while it is loaded on the instrument. The
cover is equipped with a locking mechanism.
Always remove and load reagents while the reagent disk is on the instrument and by using
the software supported procedures.
e
See Preparing the reagent disk on page B-21.
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Reagent disk IDYou can use up to eight different reagent disks on one Cedex Bio instrument. Each
reagent disk is equipped with numbered tabs. For automatic disk identification by the
instrument, one—and only one—of these tabs is removed. The number of this
removed tab is the disk ID. When you label the disk, make sure that the number on
the label corresponds to that of the removed tab.
Reagent disk container
Reagent cooler
A Reagent disk IDs. There are eight possible
IDs.
B Disk label. The number must correspond to
the reagent disk ID.
Figure A-26Reagent disk ID
C Identification tabs
D The tab has been removed for automatic
disk recognition
For storage outside the instrument, the reagent disk is placed in a container. This
reduces evaporation of reagents and prevents their contamination.
The reagent cooler holds the reagent disk with its reagent bottles. The temperature in
the cooler is kept within the range of 6 to 10°C.
A Reagent cooler
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Figure A-27Reagent cooler
e
See maintenance action Clean reagent disk and sample area on page C-14.
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Cuvette ring
The cuvette ring holds up to 6 cuvette segments, each containing 10 cuvettes.
A Cuvette ringB Cuvette segment
Figure A-28Cuvette ring
Barcode scanner
Cuvettes fit neatly in the cuvette ring, without touching the walls when being moved
along the ring.
e
See Preparing the reagents on page B-22.
See maintenance action Clean reagent disk and sample area on page C-14.
A hand-held barcode scanner is used for reading barcoded labels.
Loss of sight
The intense light of the LEDs may severely damage you eyes. Do not stare into the LEDs.
Scanning equipment using LED technology is covered by the international standard IEC
60825-1 LED Safety: Class 1.
A Barcode scannerB Scanner connector on the instrument
Figure A-29Hand-held barcode scanner
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Connect to the lower COM2 port
Always connect the barcode scanner to the lower of the two serial communication connectors (B).
e
For information on how to use the barcode scanner, see Using the barcode scanner on
page B-89.
The following containers are always supplied with barcodes:
oReagent bottles
oDiluent bottles
oAuxiliary fluids (diluents, cleaners etc.)
Sample tubes can be used with or without barcoded labels.
Reagent bottle barcodeOn the reagent bottles, barcode of the PDF417 format is used.
The barcode contains the following information:
oPart ID
oLot number
oExpiration date
oReagent volume
oSerial number of bottle
oTest data
Sample barcodeThe following barcode types are supported for sample tube identification:
oCodabar
oCodabar 2 of 7
oCode 3 of 9
oCode 128
oEAN
oInterleaved 2 of 5
oUPC (A, E)
A sample barcode must include a checksum at the end.
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Printer
The Cedex Bio instrument has a built-in thermal printer with a 112 mm paper roll.
The printer is used for example for printing placement lists, results, maintenance
action instructions, and status information on various items such as the loaded tests.
Absorbance photometer
Absorbance photometer
A Panel release button
B Paper slot
Figure A-30Printer
e
See maintenance action Refilling printer paper on page B-122.
See To clear the paper jam on page D-46.
C Printer panel
The Cedex Bio main instrument uses the absorbance photometry measuring
method.
A Photometer unit
Figure A-31Photometer unit
The measurements are taken without removing the cuvette from the rotor.
Halogen lampThe Halogen lamp is mounted on a holder for easy replacement. The system informs
you when you need to replace the lamp.
e
See maintenance action Replace photometer lamp on page C-24.
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Wavelengths for the absorbance
photometer
Measurement principles
For each cuvette, the absorbance photometer measures light intensity at 12 different
wavelengths:
340 nm449 nm520 nm629 nm
378 nm480 nm552 nm652 nm
409 nm512 nm583 nm659 nm
e
See Principles of operation on page A-19.
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Hardware overview
Connectors
A Power supply
B Data and communication connectors
C Fluid connectors
D Front USB port (not shown)
E Serial communication connector
F Barcode scanner connector
Figure A-32Connectors
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G Maintenance connectors (Do not remove the
cable.)
H USB 2 connector (for troubleshooting)
IWater connector
J Cleaner connector
K Waste connector
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Fuses
Electrical shock by electronic equipment
Do not attempt to work in any electronic compartment. Installation, service, and repair
must only be performed by authorized and qualified personnel.
The mains fuses are situated at the rear of the instrument, above the power
connector; the internal fuses are situated on the right side of the instrument, at the
top of the connector panel.
A Power connector with T6.3 A H 250 V fuseB Low voltage fuses (T3.15 A)
F1: Heating system
F2: Motors
F3: Cooling assembly
F4: Photometer unit and LEDs
Figure A-33Fuses
e
See To change the mains fuses on page D-47.
See To change a low voltage fuse on page D-49.
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Technical specifications
Technical specifications
Every effort has been made to ensure that all the information contained in these specifications is correct at the time of printing. However, Roche Diagnostics reserves the right to
make any changes necessary without notice as part of ongoing product development.
Physical dimension
Power requirements
Power requirements ISE unit
Measurement principles
Width720 mm
Depth550 mm
Height480 mm
WeightApproximately 35 kg
Line voltage100-125 V and 200-240 V (-15%, +10%)
Line frequency50 Hz (±5%) and 60 Hz (±5%)
Power consumption250 VA
Insulation coordinationInstallation category II (IEC 61010-1)
Main fuseT6. 3 A H 250 V
Low voltage fusesT3. 15 A L 250 V
BatteryLithium 3.6 V 2.3 Ah SL-360/S
Line voltage100-240 V (±10%)
Line frequency50 Hz (±5%) and 60 Hz (±5%)
Supply voltage19-24 V DC, Min. 2A
Power consumption70 VA
Insulation coordinationInstallation category II (IEC 61010-1)
Absorbance photometry(enzymes, substrates, drugs of abuse)
+
Potentiometry ISE (ion selective electrodes) Na
, K+, Cl
-
Environmental conditions
Throughput
Samples
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TemperatureRunning conditions: 15-32°C
Transport and storage: -25 to +60°C
HumidityRunning conditions: 30-80% at 15-32°C, non
condensing.
Transport and storage: 10-95%, non condensing
PollutionDegree 2 (IEC 61010-1)
AltitudeMax. 2000 m above sea level
Photometric85 tests/h max.; 60 tests/h consolidated (with typical test
panel)
ISE180 tests/h max.; 60-100 tests/h consolidated
(photometric and ISE mixed)
Sample handlingManually by operator
Time to first result5-10 min (photometric measurements)
Whenever the term "purified water" is used in this document, water of at least the quality
specified above must be used.
Roche recommends using Reagent Grade water.
Roche calibratorsSee the package inserts of the reagents.
Reagent bottles20 mL maximum
IdentificationBarcode
Barcode2-D, format PDF417
Number of tests50-200 tests, depending on the test
Segments of 10 cuvettesManual insertion and removal of segments
Single useCuvettes are for single use only
Static incubation temperature in
cuvette
37°C ±0.5°C
) [mg/L]< 0.1
2
Photometer
ISE unit
Software data handling
Mass storage
Interfaces
Absorbance photometer20 W halogen lamp
12 wavelengths340-659 nm
SensorPhotosensitive diode array
Ion-selective electrodeIndirect measurement
Sample volume15 μL; Dilution 1:6 (1 part sample, 5 parts water)
2 Electrodes
1 ISE Reference Electrode
Operating systemoLINUX
CPUsIntel XScale
Memory systemoFlash ROM
ExternalUSB memory stick
InternalFlash ROM
USB1.1/2.0For backing up data or loading data on the system
USB1.1/2.0Modem
2 x RS232Host, barcode scanner
Na, K
oVX Works
oDRAM
oSRAM
(memory stick)
Display
Printer
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Internal thermal printer Paper width 112 mm
Cedex Bio System4Software
Table of contents
Software
Getting the most out of the instrument
In this chapter, you will find information on how to operate the instrument by using
the touchscreen. You will find out about the concept of wizards and you are
introduced to the key screens.
To operate the Cedex Bio instrument, you use its touchscreen. The design and
functional concept of the touchscreen support you in the way you work.
The following table lists the major items and characteristics of a Cedex Bio screen
and describes their impact on the operation of the instrument.
Screen itemImpact on operation
Screen typesDistinct screen types make it easy for you to find your way
around the user interface. For example, you immediately
know whether you are on a main screen or whether you are
reading a message.
Screen layoutThe consistent layout allows you to quickly find the required
information and to locate the various display items.
Buttons Press a button to open and close a screen or to start a func-
tion.
ColorsThe color of an item on the screen points to its own status or
that of the item it represents.
The "traffic light" color scheme is used:
oGreen: Everything is OK.
oYellow: The system is working, but you need to intervene
for it to continue to do so.
oRed: This item does not work, you need to intervene.
WizardsA wizard denotes a predefined sequence of screens (steps)
that represent a certain task, for example defining an order.
By following the suggested sequence of steps you ensure the
proper execution of the tasks and functions.
With some critical tasks, you need to follow the wizard
exactly, right through to the end. In other cases, you may skip
a step and perform it later.
Table A-8The major items and characteristics of the touchscreen
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G
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Screen layout
Screen layout
All screens are based on the following layout:
A Status area
B Tabs
C Headline
Figure A-34Basic screen layout
D Global action area
E Working area
F Buttons area
The screen representations shown in this chapter and throughout this manual are for illustrative purposes only. The screens do not necessarily show valid data.
Depending on the function of a screen, some layout items may not be displayed.
The following is an example of a screen with the full range of display items.
A The status line displays the system status.
B Tabs represent the major work areas. You
can switch to any of them any time.
C The headline characterizes the content or
function of the screen. If the screen is part of
a sequence of screens (wizard), the headline
tells you where you are within this sequence.
D The working area displays the main content
of the screen.
Figure A-35Example of a screen
E The buttons vary depending on the content
of the working area and the screen position
within a series of steps (wizard).
F The Help button leads to concise information
that is relevant to the current screen and sit-
uation.
G The global action buttons represent the func-
tions that are permanently available: Start,
Stop, Alarm, Line Feed. The LEDs next to
them point to their status.
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Display items
Display items
The Cedex Bio screens are made up of text areas and various kinds of display items
such as tabs and buttons.
The following table lists the major display items and describes their use.
Display itemUse
ButtonPress a button to start a function. In addition, many
buttons also either open a new screen or close the
current screen.
A triangle in the top right corner of a button tells you
that a new screen will be displayed when you press
the button; a triangle in the bottom left corner that
the current screen will be closed.
Global action
button
ListPress a list item to select it. (Its color turns blue.)
The global action buttons are positioned on the right
side next to the screen. The LED next to each of the
buttons indicates whether the button is active or not.
Use the scroll buttons to display the items that are
not visible.
TextText usually provides information or instructions. It
TabTabs are used to group information into units that
Table A-9Major display items
can be color coded to indicate its importance level.
can be displayed on one screen.
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Color concept
The color of buttons and other display items tells you about the status of the display
item or the item it represents.
The Cedex Bio instrument uses the familiar "traffic light" color scheme.
ColorMeaning for buttons
GreenThe element is OK.
YellowYour intervention is required to ensure continuous operation.
RedYour immediate intervention is required. Operation has stopped.
BlueThe item is selected.
Table A-10Color concept
e
For details on the meaning of LED colors, see Color interpretation for LEDs on
page A-117.
e
For details on the meaning of button colors, see the explanations in the relevant operation
instructions.
Workflows and wizards
Screens and sequences of screens help you perform your tasks. If not all steps of a task
can be performed from one screen, the workflow is realized as a sequence of screens,
a so-called wizard. Cedex Bio wizards do not usually force you to perform a task at a
certain stage, they just make your work easier.
Navigation
Moving from screen to screenYou move from screen to screen with the help of buttons.
Knowing where you areScreens on which you perform tasks provide a headline that displays the navigation
path of the current screen.
A Button where you started
B Current position in the workflow
Figure A-36Headline with navigation path
C Headline
e
For an overview of the navigation buttons, see Navigation functions on page A-121.
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CAB
Working with the user interface
Working with the user interface
Adjusting the touchscreen
With a touchscreen, it is important that the point where you press the screen
corresponds exactly with its hardware equivalent. If this were not the case, pressing a
screen item such as a button might not lead to the expected result.
e
See Adjusting the touchscreen on page B-131.
Scrolling
If not all text or all list elements fit on one screen or display area, use the scrolling
function to display the hidden content.
A You are on the first page. You can scroll
down.
B There is text both before and after the
currently displayed text. You can scroll up
and down.
Figure A-37Scroll bars
C You are on the last page. You can scroll up.
Scroll to the previous page.
Select the previous line and scroll if necessary.
Select the next line and scroll if necessary.
Scroll to the next page.
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Working with the user interface
Expanding and collapsing lists
In hierarchically structured lists, you initially see only the top level entries. List items
that contain (but hide) lower levels of entries are marked with . List items that
display lower levels of entries are marked with .
Figure A-38Hierarchically structured list
a To expand a list
Typing text
1
Select a list item marked with .
2
Press again or press .
3
Use the scrollbar, if required, to display the items you are interested in.
a To collapse a list
1
Select a list item marked with .
2
Press again or press .
There are dedicated screens for typing alphanumeric and numeric characters.
You can choose from the following screens:
oAlphanumeric upper case
oAlphanumeric lower case
oSpecial characters
oNumeric characters
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Numeric keyboard
A Typed text
Figure A-39Numeric keyboard screen
Delete the last character displayed in the text line.
A-ZSwitch to the uppercase alphanumeric keyboard.
Alphanumeric keyboards
A Typed text
Figure A-40Upper and lowercase alphanumeric keyboard screens
Switch to the lowercase keyboard.
Switch to the uppercase keyboard.
Delete the last character displayed in the text line.
$%Switch to the special characters keyboard.
Press to insert a space.
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Special characters keyboard
A Typed text
Figure A-41Special characters keyboard screen
Switch to the lowercase alphanumeric keyboard.
A-ZSwitch to the uppercase alphanumeric keyboard.
Delete the last character displayed in the text line.
Using the filter function
a To apply a filter to a list
Press to insert a space.
In many lists you can apply a filter, that is, you can select predefined criteria for
generating a selection of entries.
The way to apply a filter is the same in all screens where a filter is available. Here is an
example:
1
Display the list.
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2
Press .
A screen is displayed for selecting the filter criterion.
A In the status line, the screen is indicated where you pressed .
3
Choose one of the filter options.
4
Press .
The list is displayed again. It now contains only the entries that comply with the
criterion you just applied by pressing its button.
After you have applied a filter, the criterion name will appear as part of the List button, for
example on screens for deleting data. If you used the Not Accepted filter criterion, the
List button would be called List [Not Accepted].
Figure A-42List button names
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Working with the user interface
Printing information
On many screens, you can print the contents of the working area on the built-in
printer. In many cases, a screen is first displayed for selecting the kind of data you
want to print. In these cases, the print button is marked with a triangle in the top
right corner .
a To print information
1
Press .
If filter criteria are available, a screen is displayed for selecting what data you want
to print. For example:
A In the status line, the screen is indicated where you pressed .
2
Choose one of the print options.
The appropriate data is automatically selected and printed.
Choose > to terminate the printing task, if required.
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B
Working with the user interface
Using online Help
The Help button is a permanent feature of all screens.
A The Help button is always in the top right corner of the screen.
Figure A-43Permanent Help button
a To display the Online Help
1
Press .
A The Legend tab describes the buttons and
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Figure A-44
B The Workflow tab provides additional
information on items on the screen or on
actions you can perform.
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B
Working with the user interface
2
Use the scroll bar to display the hidden information.
e
For details on scrolling, see Scrolling on page A-73.
Messages
Messages are displayed in two ways:
oImmediate feedback on user actions is displayed in a pop-up message screen.
oInformation concerning a problem that occurred during operation is reported in
the alarm monitor.
Message screen
Message screens are displayed automatically as soon as the message is generated.
Alarm monitor
Alarm button and LED
Figure A-45Message screen
Read the message and press to close the screen.
Messages concerning an irregularity that occurred during operation can be viewed in
the alarm monitor. The alarm LED alerts you when such messages are generated. It is
turned off when all alarm messages are confirmed.
The Alarm button is always active, even if nobody is logged on the system.
A Alarm LEDB Alarm button
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B
D
A
C
E
Working with the user interface
Interpreting the alarm LED
No color, offThere are no unconfirmed alarm messages.
YellowThere is at least one unconfirmed alarm message. You need to deal with it as soon as
possible.
RedThere is at least one unconfirmed alarm message. You need to deal with it
immediately, processing may not be able to continue unless you do so.
Acoustic signalAn acoustic signal is sounded when an alarm is generated. You can adjust the volume
(Utilities > Configuration > System > Volume).
a To display alarm messages
1
Press .
2
Use to limit the number of messages that are contained in the list.
3
Select the message you are interested in.
Alarm message
Detailed alarm message
A Alarm ID
B Total number of messages in the list.
C Display the previous alarm message.
Figure A-47
4
Press to display the detailed message.
D Problem description and short remedy
suggestion
E Display the next alarm message.
e
For details on handling alarm messages, see Reacting to alarm messages on page D-7.
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Key screens
Key screens
The screen representations shown in this chapter and throughout this manual are for illustrative purposes only. The screens do not necessarily show valid data.
The main screen is divided into tabs. These tabs represent distinct work areas.
fThe Overview tab is your main work area when performing the daily routine tasks.
oUse the Workplace to gain information on orders and the corresponding results.
You can also start the lot handling functions from this tab.
oUse the Utilities tab to perform tasks that are not normally part of the routine
analysis workflow. Typically, these would be administration and maintenance
tasks.
The following sections describe the key screens of these tabs and point out the main
tasks you can perform on them.
Overview tab
The Overview tab is your main work area when performing the daily routine tasks.
A Tube icons
B Status of current order processing
Figure A-48Overview tab
Show details about the order for this sample.
STATDefine STAT orders.
OrderDefine routine orders.
C Buttons
TestsCheck the status of the currently installed tests.
Log off, (Log on)Log off or on the system.
If somebody is logged on, your user name is displayed, for example admin; if nobody
is logged on, Log on.
PreparePerform the preliminary tasks at the beginning of a shift.
End ShiftPerform the necessary tasks when ending the shift.
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Key screens
Check the status of the reagent disk.
The reagents are OK.
Fewer than 10% of tests are left for a reagent set, or its expiration date has passed.
No or unidentified disk on board.
A reagent set is not complete or a reagent is empty.
Check the status of the cuvette segments currently loaded on the rotor.
More than one segment is available.
The last available cuvette segment is in use.
No cuvettes are available.
System StatusThe System Status button displays both the icon and the color of one of the buttons
of the underlying system status screen (see System status on page A-92).
The icons are first prioritized by color, first priority being red, followed by yellow and
green, and then according to the sequence in which they are listed below.
This button can show either of the following icons.
Analyzer (main cover)
Reagent cooler and cuvette ring temperature
Sample area ventilation
External fluid containers
Maintenance
Printer
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B
A
1
1
1*
10
1!
1!
1
1+
1*
11
1?
Key screens
Sample overview
A Sample tube buttons
B Open orders
Figure A-49Sample tube status on the Overview tab
C Results
The number in the button indicates the position on the sample area.
A sample tube button with a wide edge symbolizes a STAT order.
All tests are completed and their results are accepted.
All tests are pipetted.
The number below the sample tube button indicates the estimated time to
completion. You can remove the sample tube, the time to completion disappears
when you do so.
All tests are completed but not yet accepted.
All remaining tests are blocked for one of the following reasons:
oThere is not enough sample fluid.
oThe sample is not identified.
There is no sample on this position.
Tests are ordered. Processing has not yet started.
Tests are ordered, processing has started.
The number below the sample tube button indicates the estimated time to
completion.
The sample is identified, but no tests were ordered yet.
If working in Order Query Mode: The order could not be obtained from the host.
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Orders
fOverview > Order
Press Order to define routine orders.
The process of defining an order, and consequently which screens are displayed,
depends on how your Cedex Bio instrument is integrated in your laboratory
infrastructure (barcodes, host connection).
Identifying samples
fOverview > Order
Typing the sample ID
Figure A-50
Order Interval QC.
Order Default QC.
fOverview > Order
(If you work with barcodes, additionally press .)
Figure A-51
e
For information on how to use the keyboard screens, see Typing text on page A-74.
Order Interval QC.
Order Default QC.
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B
C
CA
Key screens
Selecting tests, profiles, and ratios,
fOverview > Order > identify sample
AEasy mode test-board, all tests fit on one
screen.
B Tabs marked with an asterisk contain
selected tests.
Figure A-52Test selection screens
CFull mode test-board. The tests are grouped
in tabs.
Tabs are used to group information into units that can be displayed on one screen.
The system administrator can define up to six test tabs, name them and assign tests,
profiles, and ratios to them.
The tests, profiles, and ratios are sorted alphabetically. Profiles and ratios precede the
tests, and they adopt the color of their tests.
The test is on board and ready for use.
The test has already been pipetted.
The test is blocked.
The expiration date of the test has passed.
There are only few tests left.
A QC is due or its result has not been accepted.
A more recent version of the application has been imported.
The test is defined but not on board.
A required diluent or cleaner is not on board.
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B
Key screens
Display a screen that contains information on the status of each test.
STAT
fOverview > STAT
Press STAT to define urgent (short turn-around time) orders.
The process of defining a STAT (short turn around time) order is identical to that of
defining a routine order. The difference lies in the scheduling of the tasks. When a
STAT order is defined, it will be the next order to be processed, irrespective of what
routine orders already exist. Existing STAT orders are finished first.
Tests
Displaying the test overview
fOverview > Tests
TabsThe tabs are displayed if you work with the order mode Full. They represent user-
defined test panels. If you work with the order mode Easy, all tests are on one panel
and there are no tabs.
A Test selection screen in order mode Easy.B Test selection screen in order mode Full.
Figure A-53Test selection screen
The color of a test button represents its status:
The test is on board and ready for use.
The test is blocked for one of the following reasons:
oThe calibration is due or failed.
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Key screens
oFor the reagent set, the number of available tests is 0, or a reagent bottle is missing
(incomplete reagent set).
oInitial calibration is required.
The expiration date of the test has passed.
There are only few tests left.
A QC is due or its result has not been accepted.
A more recent version of the application has been imported.
The test is not on board.
A required diluent or cleaner is not on board.
Display detailed information on the status of this test.
Display a list of all defined tests, together with information on their status.
Handle the reagent disk that is currently on board.
Displaying test details
fOverview > Tests > test button
A Status description of the test
Figure A-54Details on a test
The color of the text indicates whether you need to react to the information, and if so,
with which urgency you need to deal with the issue.
CalibrationInformation on the calibration status.
Quality controlInformation on the QC status.
Tests on diskTotal number of tests that are currently available. (There might be more than one
reagent set for this test on board.)
Tests ready to runNumber of tests that could be performed, taking into account all disks known to the
system. (The reagent sets have been calibrated and are ready for use.)
Print the test status information.
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Key screens
Show the fluids that were used for generating this result, together with their lot
information.
Profiles are user defined sets of tests. They are represented like any other test.
Log off
fOverview > button with your user name
Log off the system.
You can log off any time, even while the system is processing orders.
Prepare
fOverview > Prepare
Start the Prepare wizard to perform the preliminary tasks at the beginning of a shift.
End shift
fOverview > End Shift
Cuvette status
Start the End Shift wizard to perform the tasks necessary for ending the shift.
fOverview > .
A Overview of required and available cuvettes
Figure A-55Cuvette status
The six cuvette segments are represented by buttons. The number in the button
indicates how many cuvettes are free to
be used.
Press a segment button to exchange the corresponding segment.
The segment buttons are color coded:
All cuvettes are used.
Up to two cuvettes are free to be used.
More than two cuvettes are free to be used.
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B
<xyz>
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Key screens
Disk and reagent status
fOverview >
A A plus (+) indicates that there is already an active identical reagent set on board. (This icon is
displayed as soon as the first bottle of the set is loaded.)
B The number to the left of the button indicates the number of free positions on the disk.
Figure A-56Reagent sets loaded on the reagent disk
The color of a reagent set button represents the status of the set:
The reagent set is on board, but it is blocked for one of the following reasons:
oThe number of available tests is 0.
oThe set is incomplete.
oThe test needs calibrating.
There are fewer than 10% of tests are left for this set.
The expiration date has passed.
The reagent set is on board and ready for use.
oThere is no application that uses this reagent set.
oA required diluent or cleaner is not on board.
Display detailed information on the status of this test.
Load a reagent set. The number to the left of the button indicates the number of free
positions on the disk.
Display a list with all tests on board, together with information on their status.
On the list, the following abbreviations are used to indicate the status of the reagent
set:
oC: Calibration missing
oE: Empty
oI: Incomplete
oN: Not used
oL: Low
oX: Expired
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Key screens
Handle the reagent disk.
ISE status
fOverview > .
Figure A-57ISE status
Na, K, RefDisplay detailed information on the status of the electrode.
The expiration date of an electrode has passed.
The electrode is ready for use.
Calibration required. (Does not apply to the reference electrode.)
After installing a new electrode, the Electrode Service maintenance action is due.
Cal, RefDisplay detailed information on the status of the ISE fluid bottle.
No fluid registered by a sensor. (Operation has stopped.)
Calibration required.
The fluid level in the bottle is low. (Operation will proceed until one of the sensors
detects that there is no fluid.)
There is sufficient fluid.
Display the placement list for actions that are due, for example calibration or
electrode service.
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Key screens
System status
fOverview > , or , or , or , or , or
The system status button on the Overview tab displays both the color and the icon of
one of buttons of the system status screen. (The icons are first prioritized by color,
first priority being red, followed by yellow and green, and then according to the
sequence in which they appear on the screen.)
Figure A-58System status
Check the texts for the status of hardware items and on IDs of installed software.
Status of the instrument.
The main cover is open.
Temperature status for reagent cooler and cuvette ring.
The temperature is outside the acceptable range.
Status of the sample area fan.
The fan is not running.
Display information on the fill status of each of the external bottles.
The color of the underlying buttons is displayed.
e
See Checking the external bottles on page A-93.
Display the maintenance actions list.
The color of the most urgent maintenance action is displayed.
e
See Maintenance on page A-107.
Status of the printer paper.
The printer is out of paper.
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