MSI MS-98B5 User Manual

MS-98B5
(v1.x) Industrial Computer Board
i
ii
Preface MS-98B5

Copyright Notice

Trademarks

All trademarks are the properties of their respective owners.
MSI® is a registered trademark of Micro-Star Int’l Co.,Ltd.
NVIDIA® is a registered trademark of NVIDIA Corporation.
AMD® is a registered trademark of AMD Corporation.
Intel® is a registered trademark of Intel Corporation.
Windows
AMI® is a registered trademark of Advanced Micro Devices, Inc.
Award® is a registered trademark of Phoenix Technologies Ltd.
Realtek® is a registered trademark of Realtek Semiconductor Corporation.
®
is a registered trademark of Microsoft Corporation.

Revision History

Revision Date
V1.0 2014/02

Technical Support

If a problem arises with your system and no solution can be obtained from the user’s manual, please contact your place of purchase or local distributor. Alterna­tively, please try the following help resources for further guidance.
Visit the MSI website for technical guide, BIOS updates, driver updates, and other information:
http://www.msi.com/service/download/
Contact our technical sta󰘯 at:
http://support.msi.com/

Safety Instructions

Always read the safety instructions carefully.
Keep this User’s Manual for future reference.
Keep this equipment away from humidity.
Lay this equipment on a reliable flat surface before setting it up.
The openings on the enclosure are for air convection hence protects the
equipment from overheating. DO NOT COVER THE OPENINGS.
Make sure the voltage of the power source and adjust properly 110/220V
before connecting the equipment to the power inlet.
Place the power cord such a way that people can not step on it. Do not place
anything over the power cord.
Always Unplug the Power Cord before inserting any add-on card or mod
ule.
All cautions and warnings on the equipment should be noted.
Never pour any liquid into the opening that could damage or cause electrical
shock.
If any of the following situations arises, get the equipment checked by ser
vice personnel:
The power cord or plug is damaged.
Liquid has penetrated into the equipment.
The equipment has been exposed to moisture.
The equipment does not work well or you can not get it work according
to User’s Manual.
The equipment has dropped and damaged.
The equipment has obvious sign of breakage.
DO NOT LEAVE THIS EQUIPMENT IN AN ENVIRONMENT UNCONDI-
TIONED, STORAGE TEMPERATURE ABOVE 60oC (140oF), IT MAY DAM­AGE THE EQUIPMENT.
-
-
CAUTION: Danger of explosion if battery is incorrectly replaced. Replace only with the same or equivalent type recommended by the manufacturer.
警告使用者: 這是甲類資訊產品,在居住的環境中使用時,可能會造成無線電干擾,在這種情
況下,使用者會被要求採取某些適當的對策。
iii
iv
Preface MS-98B5

Chemical Substances Information

In compliance with chemical substances regulations, such as the EU REACH Regulation (Regulation EC No. 1907/2006 of the European Parliament and the Council), MSI provides the information of chemical substances in products at:
http://www.msi.com/html/popup/csr/evmtprtt_pcm.html

Battery Information

European Union:
Batteries, battery packs, and accumulators should not be disposed of as unsorted household waste. Please use the public collection system to return, recycle, or treat them in compliance with the local regulations.
Taiwan:
For better environmental protection, waste batteries should be collected separately for recycling or special disposal.
California, USA:
The button cell battery may contain perchlorate material and requires special handling when recycled or disposed of in California.
For further information please visit:
http://www.dtsc.ca.gov/hazardouswaste/perchlorate/
Danger of explosion if battery is incorrectly replaced. Replace only with the same or equivalent type recommended by the manufacturer.

CE Conformity

Hereby, Micro-Star International CO., LTD declares that this device is in compliance with the essential safety requirements and other relevant provisions set out in the European Directive.

FCC-A Radio Frequency Interference Statement

This equipment has been tested and found to comply with the limits for a Class A digital device, pursuant to Part 15 of the FCC Rules. These limits are designed to provide reasonable protection against harmful interference when the equipment is operated in a commercial environment. This equipment generates, uses and can radiate radio frequency energy and, if not installed and used in accordance with the instruction manual, may cause harmful interference to radio communications. Operation of this equipment in a residential area is likely to cause harmful interference, in which case the user will be required to correct the interference at his own expense.
Notice 1
The changes or modifications not expressly approved by the party responsible for compliance could void the user’s authority to operate the equipment.
Notice 2
Shielded interface cables and AC power cord, if any, must be used in order to comply with the emission limits.
VOIR LA NOTICE D’INSTALLATION AVANT DE RACCORDER AU RESEAU.
This device complies with Part 15 of the FCC Rules. Operation is subject to the following two conditions:
this device may not cause harmful interference, and
1)
this device must accept any interference received, including interference that
2) may cause undesired operation.

WEEE Statement

Under the European Union (“EU”) Directive on Waste Electrical and Electronic Equipment, Directive 2002/96/EC, which takes effect on August 13, 2005, products of “electrical and electronic equipment” cannot be discarded as municipal waste anymore and manufacturers of covered electronic equipment will be obligated to take back such products at the end of their useful life. MSI will comply with the product take back require ments at the end of life of MSI-branded products that are sold into the EU. You can return these products to local collection points.
v
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vi
Preface MS-98B5
Contents
Copyright Notice ............................................................................................ ii
Trademarks ................................................................................................... ii
Revision History
Technical Support
Safety Instructions
Chemical Substances Information
Battery Information
CE Conformity
FCC-A Radio Frequency Interference Statement
WEEE Statement .......................................................................................... v
1. Overview.......................................................................................1-1
Mainboard Specifications ...........................................................................1-2
Mainboard Layout
2. Hardware Setup ...........................................................................2-1
CPU (Central Processing Unit) ..................................................................2-3
Memory ......................................................................................................2-6
Power Supply .............................................................................................2-8
Rear Panel I/O ...........................................................................................2-9
Connector .................................................................................................2-12
Jumper .....................................................................................................2-19
Slot ...........................................................................................................2-21
3. BIOS Setup ...................................................................................3-1
Entering Setup ...........................................................................................3-2
MS-98B5 Q87 SKU ....................................................................................3-4
The Menu Bar ............................................................................................3-4
Main
...........................................................................................................3-5
Advanced ...................................................................................................3-6
Boot .......................................................................................................... 3-12
Security
Chipset
.....................................................................................................3-18
Power .......................................................................................................3-19
Save & Exit
............................................................................................ ii
.......................................................................................... ii
.........................................................................................iii
............................................................... iv
....................................................................................... iv
............................................................................................... v
......................................... v
......................................................................................1-5
....................................................................................................3-13
...............................................................................................3-21
MS-98B5 H81 SKU ..................................................................................3-22
The Menu Bar ..........................................................................................3-22
Main
.........................................................................................................3-23
Advanced .................................................................................................3-24
Boot .......................................................................................................... 3-30
Security
....................................................................................................3-31
Chipset
.....................................................................................................3-35
Power .......................................................................................................3-36
Save & Exit
...............................................................................................3-38
Appendix WDT & GPIO ...................................................................A-1
WDT Sample Code ................................................................................... A-2
GPIO Sample Code .................................................................................. A-3
vii

1 Overview

Thank you for choosing the MS-98B5, an excellent industrial computer board.
Based on the innovative Intel efficiency, the MS-98B5 accommodates the Intel® Haswell processor and supports up to 4 DDR3/DDR3L 1333/1600 UDIMM slots to provide the maximum of 32GB memory capacity.
In the advanced-level and mid-range market segment, MS-98B5 provides a high-performance solution for today’s front-end and general purpose workstation, as well as in the future.
®
H81/ Q87 chipset for optimal system
1-1-1
1-2
Overview MS-98B5
Mainboard Specications
Processor
4th generation Intel Core i3/ i5/ i7 processor (LGA1150)
Chipset
Q87 SKU
Intel Q87 chipset
-
H81 SKU
Intel H81 chipset
-
Memory
Q87 SKU
4 DDR3/DDR3L 1333/1600 UDIMM slots
-
Supports the maximum of 32GB
-
Supports dual-channel mode
-
H81 SKU
2 DDR3/DDR3L 1333/1600 UDIMM slots
-
Supports the maximum of 16GB
-
Supports dual-channel mode
-
LAN
Intel I217-LM Gigabit Fast Ethernet controller (LAN1)
Intel I210-AT Gigabit Fast Ethernet controller (LAN2)
SATA
Q87 SKU
6 SATA 6Gb/s ports (SATA1, SATA2, SATA3, SATA4, SATA5_3,
-
SATA6_4)
H81 SKU
2 SATA 6Gb/s ports (SATA1, SATA2)
-
2 SATA 3Gb/s ports (SATA5_3, SATA6_4)
-
Audio
Realtek ALC887 audio codec
3 audio jacks
Graphics
Graphics integrated in Intel processor
Rear Panel I/O
Q87 SKU
1 PS/2 mouse/keyboard combo port
-
2 RS-232/422/485 serial ports
-
2 Gigabit LAN jacks
-
4 USB 3.0 ports
-
2 USB 2.0 ports
-
1 DVI-I port
-
1 DisplayPort
-
3 flexible audio ports
-
H81 SKU
1 PS/2 mouse/keyboard combo port
-
2 RS-232/422/485 serial ports
-
2 Gigabit LAN jacks
-
2 USB 3.0 ports
-
4 USB 2.0 ports
-
1 DVI-I port
-
1 DisplayPort
-
3 flexible audio ports
-
Onboard Pin Headers/ Connectors/ Jumpers
Q87 SKU
6 SATA 6Gb/s ports
-
3 USB 2.0 connectors (6 ports)
-
4 RS-232 serial port connectors
-
1 TPM connector
-
1 parallel port connector
-
1 front panel connector
-
1 front audio connector
-
1 GPIO pin header
-
1 SMBus connector
-
1 DisplayPort connector
-
1 chassis intrusion pin header
­1 clear CMOS jumper
-
6 serial port power jumpers
­1 AT/ATX select jumper
-
1 non-volatile memory jumper
-
H81 SKU
2 SATA 6Gb/s ports
-
2 SATA 3Gb/s ports
-
2 USB 2.0 connectors (4 ports)
-
4 RS-232 serial port connectors
-
1 TPM connector
-
1 parallel port connector
-
1 front panel connector
-
1 front audio connector
-
1 GPIO pin header
-
1 SMBus connector
-
1 DisplayPort connector
-
1 chassis intrusion pin header
­1 clear CMOS jumper
-
6 serial port power jumpers
­1 AT/ATX select jumper
-
1 non-volatile memory jumper
-
1-3
1-4
Overview MS-98B5
Slot
Q87 SKU
1 PCIe x16 slot (Gen 3)
-
3 PCIe x1 slots
-
2 full-size Mini-PCIe slots
-
3 PCI slots
-
H81 SKU
1 PCIe x16 slot (Gen 2)
-
3 PCIe x1 slots
-
3 PCI slots
-
Form Factor
ATX form factor: 12” x 9.6”
Environmental
Operating Temperature: 0oC ~ 60oC
Storage Temperature: -20oC ~ 80oC
Humidity: 5% ~ 90% RH, Non-Condensing
SKU Comparison
SKUs
Features
PCH Q87 H81
DIMM slot 4 2
SATA 6 G/bs qty 6 2
SATA 3 G/bs qty 0 2
Rear panel USB
Onboard USB pin header
Mini-PCIe slot 2 0
Q87 SKU H81 SKU
4 USB 3.0
2 USB 2.0
3 USB 2.0 (6 Ports) 2 USB 2.0 (4 Ports)
2 USB 3.0
4 USB 2.0

Mainboard Layout

MS-98B5 Q87 SKU
Back Panel
PCIe Slot
COM Port Jumper
System Fan
DisplayPort Connector
NVM Jumper
Connector
CPU Socket
CPU Fan Connector
Power Connector
DIMM Slots
System Fan Connector
Power Connector
Front Audio
Connector
PCI Slot
AT/ATX Jumper
Chassis Intru-
sion Pin Header
GPIO Pin Header
PCIe Slot
Front Panel
Connector
Mouse/
Keyboard
Combo
USB 2.0
Parallel Port Connector
Port
Port
LAN Port
USB 3.0
Port
COM Port Con­nector/Jumper
LAN Port
Port
TPM Connector
Serial Port
Serial Port USB 3.0
USB 2.0 Pin Header
DVI-I Port
DisplayPort
Clear CMOS Jumper
SATA Port
SMBus Connector
System Fan Connector
Mini-PCIe Slot
Line-In
Line-Out
Mic-In
1-5
Overview MS-98B5
MS-98B5 H81 SKU
Back Panel
PCIe Slot
Front Audio
Connector
PCI Slot
AT/ATX Jumper
Chassis Intru-
sion Pin Header
GPIO Pin Header
PCIe Slot
Front Panel
Connector
COM Port Jumper
System Fan
Connector
Parallel Port Connector
DisplayPort Connector
NVM Jumper
TPM Connector
CPU Socket
Power Connector
COM Port Con­nector/Jumper
System Fan ConnectorCPU Fan Connector
DIMM Slots
USB 2.0 Pin Header
Power Connector
Clear CMOS Jumper
SATA Port
SMBus Connector
System Fan Connector
1-6
Mouse/
Keyboard
Combo
Port
USB 2.0
Port
Serial Port
Serial Port USB 2.0
LAN
Port
USB 3.0
Port
LAN Port
Port
DVI-I Port
DisplayPort
Line-In
Line-Out
Mic-In

2 Hardware Setup

This chapter provides you with the information about hardware setup procedures. While doing the installation, be careful in holding the com ponents and follow the installation procedures. For some components, if you install in the wrong orientation, the components will not work prop­erly. Use a grounded wrist strap before handling computer components. Static electricity may damage the components.
-
2-2-1
2-2
Hardware Setup MS-98B5
Components Reference Guide
CPU (Central Processing Unit) ........................................................2-3
Memory ..............................................................................................2-6
Power Supply ....................................................................................2-8
System Power Connector: JPWR1 ............................................................2-8
CPU Power Connector: JPWR2 .................................................................2-8
Rear Panel I/O ...................................................................................2-9
Connector ........................................................................................2-12
Fan Power Connector: CPUFAN1, SYSFAN1 ~ SYSFAN3 ..................... 2-12
GPIO Pin Header: JGPIO1
Serial ATA Connector: SATA1 ~ SATA6
I2C Bus Connector: JSMB1 .....................................................................2-14
Front Panel Connector: JFP1 ...................................................................2-14
USB 2.0 Connector: JUSB1, JUSB2, JUSB3 ...........................................2-15
RS-232 Serial Port Connector: JCOM3 ~ JCOM6
TPM Module Connector: JTPM1 .............................................................. 2-16
Front Audio Connector: JAUD1
DisplayPort Connector: JDP1
Chassis Intrusion Pin Header: JCI1
Parallel Port Connector: JLPT1 ................................................................2-18
Jumper.............................................................................................2-19
Clear CMOS Jumper: JBAT1 ...................................................................2-19
AT/ATX Select Jumper: JAT1 ................................................................... 2-19
Serial Port Power Jumper: JCOMP1 ~ JCOMP6
Non-Volatile Memory Jumper: JNVM1
Slot ...................................................................................................2-21
PCIe (Peripheral Component Interconnect Express) Slot ........................ 2-21
Mini-PCIe (Peripheral Component Interconnect Express) Slot
PCI (Peripheral Component Interconnect) Slot
......................................................................2-13
...................................................2-13
...................................2-15
................................................................ 2-17
..................................................................2-17
.........................................................2-18
.....................................2-20
.....................................................2-20
................2-21
........................................ 2-21

CPU (Central Processing Unit)

When installing the CPU, make sure that you install the cooler to prevent over­heating. If you do not have the CPU cooler, consult your dealer before turning on the computer.
Important
Overheating
Overheating will seriously damage the CPU and system. Always make sure the cooling fan can work properly to protect the CPU from overheating. Make sure that you apply an even layer of thermal paste (or thermal tape) between the CPU and the heatsink to enhance heat dissipation.
Replacing the CPU
While replacing the CPU, always turn off the power supply or unplug the power supply’s power cord from the grounded outlet first to ensure the safety of CPU.
Introduction to LGA 115x CPU
The surface of LGA 115x CPU. Remember to apply some thermal paste on it for better heat dispersion.
Alignment Key
Yellow triangle is the Pin 1 indicator
Alignment Key
2-3
2-4
Hardware Setup MS-98B5
CPU Installation
When you are installing the CPU, make sure the CPU has a cooler attached on the top to prevent overheating. Meanwhile, do not forget to apply some thermal paste on CPU before installing the heat sink/cooler fan for better heat disper­sion.
Open the load lever and remove the
1. Lift the load lever up to fully open plastic cap.
After con󰘰rming the CPU direction for
3. Engage the load lever while pressing correct mating, put down the CPU in the socket housing frame. Be sure to grasp on the edge of the CPU base. Note that the alignment keys are matched.
2. position.
4. down lightly onto the load plate.
Alignment Key
Important
Visually inspect if the CPU is seated well into the socket. If not, take out the CPU with pure vertical motion and reinstall.
Secure the load lever with the hook
5. Make sure the four hooks are in proper under the retention tab.
Press the four hooks down to fasten
7. Finally, attach the CPU Fan cable the cooler. Turn over the motherboard to con󰘰rm that the clip-ends are correctly inserted.
6. position before you install the cooler. Align the holes on the motherboard with the cooler. Push down the cooler until its four clips get wedged into the holes of the motherboard.
8. to the CPU fan connector on the motherboard.
Important
Confirm if your CPU cooler is firmly installed before turning on your system.
Do not touch the CPU socket pins to avoid damage.
Whenever CPU is not installed, always protect your CPU socket pins with the plastic
cap covered. Please refer to the documentation in the CPU cooler package for more details about
the CPU cooler installation. Read the CPU status in BIOS.
2-5
2-6
Hardware Setup MS-98B5

Memory

Dual-Channel Mode
In Dual-Channel mode, make sure that you install memory modules of the same type and density in different channel DIMM slots.
Q87 SKU
DIMM1 (Channel A) DIMM2 (Channel A) DIMM3 (Channel B) DIMM4 (Channel B)
H81 SKU
DIMM1 (Channel A)
DIMM3 (Channel B)
Recommended Memory Population
Q87 SKU
Number of DIMMs installed 1 2 3 4
DIMM1 (ch A) V V V V
DIMM2 (ch A) V V
DIMM3 (ch B) V V V
DIMM4 (ch B) V
H81 SKU
Number of DIMMs installed 1 2
DIMM1 (ch A) V V
DIMM3 (ch B) V
Important
"V" indicates a populated DIMM slot.
Paired memory installation for Max performance.
Populate the same DIMM type in each channel, specifically: 1. Use the same
DIMM size; 2. Use the same number of ranks per DIMM.
Installing Memory Modules
The memory module has only one notch on the center and will only 󰘰t in the
1. right orientation.
Insert the memory module vertically into the DIMM slot. Then push it in until
2. the golden 󰘰nger on the memory module is deeply inserted in the DIMM slot. The plastic clip at each side of the DIMM slot will automatically close when the memory module is properly seated.
Manually check if the memory module has been locked in place by the DIMM
3. slot clips at the sides.
Notch
Volt
Important
You can barely see the golden finger if the memory module is properly inserted
in the DIMM slot. To enable successful system bootup, always insert the memory module into
the DIMM1 first.
2-7
2-8
Hardware Setup MS-98B5
13 .+ 3. 3
V
1. +3 .3
V
14 .- 12 V
2. +3 .3
V
15 .G ro un d
3
.G ro un d
16 .P S- ON #
4. +5 V
17 .G ro un d
5
.G ro un d
18 .G ro un d
6. +5 V
19 .G ro un d
7
.G ro un d
22 .+ 5
V
10 .+ 12 V
20 .- 5
V
8. PW R O
K
23 .+ 5
V
11
.+ 12 V
21 .+ 5
V
9. 5V SB
24 .G ro un d
12 .+ 3. 3
V
4. +1 2V
2
.G ro un d
3. +1 2V
1
.G ro un d

Power Supply

System Power Connector: JPWR1

This connector allows you to connect a power supply. To connect to the power supply, make sure the plug of the power supply is inserted in the proper orienta­tion and the pins are aligned. Then push down the power supply firmly into the connector.

CPU Power Connector: JPWR2

This connector is used to provide power to the CPU.
Important
Make sure that all power connectors are connected to the power supply to ensure stable operation of the motherboard.

Rear Panel I/O

Q87 SKU
Mouse/
Keyboard
Combo
Port
Serial Port
LAN
Port
LAN Port
DVI-I Port
Line-In
Line-Out
USB 2.0
Port
Serial Port USB 3.0
USB 3.0
Port
Port
DisplayPort
Mic-In
H81 SKU
Mouse/
Keyboard
Combo
Port
USB 2.0
Port
Keyboard / Mouse Combo Port
Serial Port
Serial Port USB 2.0
The standard PS/2® mouse/keyboard DIN connector is for a PS/2® mouse/key­board.
USB 2.0 Port
The USB (Universal Serial Bus) port is for attaching USB devices such as key­board, mouse, or other USB-compatible devices.
USB 3.0 Port
The USB 3.0 port is backward-compatible with USB 2.0 devices and supports data transfer rate up to 5 Gbit/s (SuperSpeed).
LAN Port
USB 3.0
Port
LAN Port
Port
DVI-I Port
DisplayPort
Line-In
Line-Out
Mic-In
2-9
2-10
Hardware Setup MS-98B5
RS-232/422/485 Serial Port
The serial port is a 16550A high speed communications port that sends/ receives 16 bytes FIFOs. You can attach a serial mouse or other serial devices directly to the connector.
RS-232
PIN SIGNAL DESCRIPTION
1 2 3 4 5 6 7 8 9
DCD RXD TXD DTR GND DSR RTS CTS VCC_COM1
Data Carrier Detect Receive Data Transmit Data Data Terminal Ready Signal Ground Data Set Ready Request To Send Clear To Send Voltage select setting by jumper
RS-422
PIN SIGNAL DESCRIPTION
1 2 3 4 5 6 7 8 9
422 TXD­422 RXD+ 422 TXD+ 422 RXD­GND NC NC NC NC
Transmit Data, Negative Receive Data, Positive Transmit Data, Positive Receive Data, Negative Signal Ground No Connection No Connection No Connection No Connection
RS-485
PIN SIGNAL DESCRIPTION
1
485 TXD-
2
NC
3
485 TXD+
4
NC
5
GND
6
NC
7
NC
8
NC
9
NC
Transmit Data, Negative No Connection Transmit Data, Positive No Connection Signal Ground No Connection No Connection No Connection No Connection
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