UVP VisiDoc-It Imaging System User Manual

VisiDoc-It with Stand
VisiDoc-It with Hood
VisiDoc-It
Imaging System
Installation and User Instructions
UVP, LLC Ultra-Violet Products Ltd.
2066 W. 11th Street Unit 1, Trinity Hall Farm Estate Upland, CA 91786 Nuffield Road, Cambridge CB4 1TG UK Phone: (800) 452-6788 / (909) 946-3197 Phone: +44(0)1223-420022 Fax: (909) 946-3597 Fax: +44(0)1223-420561

Web Site: www.uvp.com

81-0309-01 Rev C
VisiDoc-It Imaging System 2
Transilluminator (check the
8” LCD Touch Screen
USB Drive
System Processor

System Introduction

The VisiDoc-It Imaging System is designed for researchers who already have a transilluminator in the lab. Configurations include a compact hood or camera stand. The compact hood fits on top of UVP’s High Performance and Benchtop Transilluminators. The VisiDoc-It System provides simple documentatio n of fluorescent and non-fluoresce nt gels, me mbranes, blots, film plates and assays with the ability to save images to a USB storage device for later quantitative analysis.

VisiDoc-It Components

Refer to the packing slip and pictured components for parts included with the system.
VisiDoc-It with Hood
Camera and Lens Kit
Hood (with handles) fits over the filter area on the transilluminator
packing slip to determine if the system includes a transilluminator)
EtBr Filter is mounted in the top of the hood
VisiDoc-It Imaging System 3
Transilluminator with UV
Camera and Lens Kit
8” LCD Touch Screen
USB Drive
System Processor
VisiDoc-It with Stand
Camera Stand with X/Y Movement
EtBr Filter is mounted under the Lens
Blocking Cover (check the packing slip to determine if the system includes a transilluminator)
VisiDoc-It Imaging System 4

Camera

The VisiDoc-It includes the FluorCam 210 Camera
making any adjustments to the camera setting s.
Lens

Processor

Ethidium Bromide Filter (EtBr )

The Ethidium Bromide (EtBr) Filter (50mm sq.) UV

System Specifications

with a resolution of 640 x 480 (VGA) and a USB 2.0 PC interface. All camera settings are factory pre-set for optimum performance when viewing gels, films, or membranes under low light level conditions. UVP Technical Support should be contacted before
The 8-48 mm zoom lens is fitted with a close-up diopter and step-up ring. The camera can then be held in a fixed position. The diopter is for focusing on objects at the focus length of the VisiDoc-It system.
Internal Storage: 75GB or mor e
USB 2.0 ports: 1 front, 4 in the back USB storage device capacity: 8GB (minimum) Software: TS software
blocking bandpass interference filter blocks UV and IR radiation emitted from the transilluminator. The filter is placed in the filter tray below the camera assembly. The filter allows visualization of fluorophores from 580-630nm, targeting the EtBr emission which peaks at 605nm. The EtBr filter can be substituted for other specific fluorophore filters or removed when imaging non-fluorescent media (protein gels, colony plates, etc.) in order to produce brighter images.

Hood Enclosure or Camera Stand for the VisiDoc-It System

The compact hood enclosure is manufactured of lightweight plastic for portability. Handles are positioned on two sides of the hood to make it easy to move the hood for access to the transilluminator surface. The camera with a zoom lens is mounted on top of the hood or camera stand.
VisiDoc-It Imaging System 5
UV/White Converter Plate

Transilluminator

For VisiDoc-It systems, transilluminators are optional equipment. The VisiDoc-It System can accommodate UVP’s Benchtop and FirstLight transilluminator models. The VisiDoc-It (with stand design) can also accommodate the High Performance UV Transilluminators (25-watt) and White/UV Transilluminators (8-watt). UVP offers a variety of transilluminators, from the benchtop models with 8­watt, single wavelength and single intensity to multiple wavelengths and high/low intensities, or the highly uniform FirstLight transilluminator.

LCD Touch Screen

The display is an 8-inch VGA color touch screen connected to the darkroom cabinet with tilt adjustment. The touch screen allows the user to preview, snap, save and print images, as well as select certain preference options, without the need of an external mouse or keyboard.
A stylus pen is included for increased pointer control for selecting software options on the touch screen.

Focus Target

The focus target fluoresces when placed on a transilluminator or when exposed to overhead UV. The Target provides sharp, fluorescent images to aid in adju sti ng the focus of the camera.

Removable USB Stick

The removable USB stick has 8GB memory (minimum) included with the system which connects to the system allowing transfer of images.

Optional Equipment

Refer to the ordering infor mat i on s ect ion of this man ual for optional equipment part numbers.
Thermal Printer
The thermal printer provides archive quality, 256 grayscale prints, and five optional cost-effective print sizes.
Converter Plates
The UV/White Converter Plate allows imaging of non­fluorescent stained media with an ultraviolet transilluminator. The converter plate is specially coated to convert the 302nm UV output to white light, rather than using a separate white light box.
The Visi-Blue Converter Plate converts UV to 460-470nm designed for use with blue excitation samples and SYBR green, SYPRO orange and GFP stains.
Transilluminators
If the system does not include a transilluminator (check the packing slip), contact UVP for ordering information or go to high performance FirstLight Transi llu mi nator.
www.uvp.com. Available transilluminators include the compact 8-watt models to the
Printer
VisiDoc-It Imaging System 6
The camera and zoom lens are assembled at the
Step up ring
Diopter

Setup Instructions

Components

Camera with zoom lens, bracket, filter, cables VisiDoc-It hood or stand USB storage device, 8GB (minimum) Transilluminator (may be ordered separately)
WARNING: DO NOT ATTEMPT TO CONNECT ANY WIRING WHILE THE EQUIPMENT IS CONNECTED TO ANY POWER SUPPLY
CAUTION:
Do not install the system in places with high moisture, dust, or high temperatures. Do not use any oil or petroleum based cleaner for the cabinet. Use only mild soap or detergent solution for cleaning. Ensure that the system is turned OFF during cleaning. Keep the equipment away from motors or other large magnetic equipment.

Camera Setup

In the VisiDoc-It Hood
UVP factory.
Remove the cap from the lens.
Attach the step up ring and diopter to the lens. The step up ring and diopter will only fit one way.
Using the four thumb screws provided, secure the bracket to the base.
Slide the camera and lens assembly into the
camera bracket. Slide the lens through the center hole in the gasket. The gasket forms a seal around the lens.
VisiDoc-It Imaging System 7
processor power
USB ports
Insert and tighten the knob/washer in the central hole in the camera to secure the camera to the bracket.
Plug the camera cable into the top the camera and the other end into a USB port on back of the processor.
Connection for the
Connect the power cord from the
transilluminator to a surge protected power outlet.
Connect the main power cord from the back
of the processor to a surge protected power outlet.

Printer Setup

The thermal printer is an optional accessory. Proceed to the next section if a printer was not included with the shipment.

Stylus and Holder

The screen is touch sensitive. If desired, use the stylus included with the system to operate the software controls. For easy access to the stylus when operating the system, remove the tape from the back of the holder and adhere it to the VisiDoc-It. Slide the stylus into the holder when not in use.
VisiDoc-It Imaging System 8
Main power

Using the System

Powering Up the System

Power up the system by pushing once on the MAIN POWER button located on the right side of the
processor.
Turn on the transilluminator.
To power down the system, push the main power button.

Adjusting the Screen Angle

To adjust the angle of the screen, loosen the knobs on each side of the monitor. Twist each knob counter-clockwise.
Tilt the screen to the desired angle. Turn each knob clockwise to tighten.

Operating the TS Software

The system will go through the boot-up process. When ready, the LCD will display the TS software screen similar to the one below:
VisiDoc-It Imaging System 9
To shut down the TS software, touch the X on the bottom left corner of the screen. To turn the system off, press the MAIN POWER button or power down from the Windows icon on the bottom
right corner of the screen. Refer to Touch Screen Interface in this manual for detailed instr uct ions on using the software.

Using the Transilluminator

To use the transilluminator, turn on the transilluminator power on the front of the unit. NOTE: When the transilluminator is illuminated, ensure that the UV blocking cover is in position to prevent
any exposure to UV.

Image Focusing

Prior to capturing images, prepare the image focus capabilities of the system:
Turn on the transilluminator and place the F luor es cent Foc us Target on the transilluminator surface. While watching the LCD screen, rotate the lens f-stop adjustment so that the ima ge is brig ht enough to
see on the screen.
Rotate the lens focus adjustment on the lens. Adjust this so that the image appears in clear focus on the
LCD monitor. Note: Once the proper zoom range is set, the lens will have to be refocused when zoomed in completely.
Rotate the zoom lens adjustm ent so that the image is as large as possible. Readjust the focus ring on
the lens, making the image clear. Adjust the zoom so that the object of interest is within the frame on the LCD monitor.
VisiDoc-It Imaging System 10

Touch Screen Interface

Setting User Preferences on the TS Software

Before capturing images, set up the user preferences by touching the PREF (preferences) button on the main screen. Select from the following tabs:
Capture Postprocessing Saving
Capture Tab
Active Camera: The name of the attached ca mera w ill be shown. Bit Depth: Select the bit depth. 16 bpp (bits per pixel) is shown for the Gel HR Camera. Display Time Stamp: Turn the time stamp on or off.
Postprocessing Tab
Auto Rotate: To rotate the image, click the OFF button and then the down arrow. Rotate options are:
0, 90, 180 or 270 degrees. Auto Invert Image: Click ON to automatically invert the colors within the image.
VisiDoc-It Imaging System 11
Saving Tab
NOTE: If the auto save function is enabled, the image will automatically save when the SNAP button is
pressed. If the auto save function is not enabled, press the SAVE button to save an image. A pop up screen will allow the user to save to the USB Drive or a different location with Prompt for Location function.
Save Images To: Select the location where images are to be saved. White highlight indicates which button is activated. The USB DRIVE will save the file to the USB drive if one is plugged in. If one is not plugged in, the user will be prompted to select a different location. PROMPT FOR LOCATION will ask the user to select a location when the SAVE button is pre ss ed.
Save Format: Click the down arrow to select the file format. Save images as TIFF (16-bit), JPEG (8-bit) or GIF (8-bit) file formats.
Auto Save To: Click the white box to active the auto save function. To change the folder to a different location, click in the folder field and a “Browse for Folder” window will pop up. Select a folder or make a new folder. Click OK to close the window. The selected folder will display in the auto save to box.
Auto Print: Select from Never, Always, or After Save
NOTE: These options will be reflected after capturing an image with the SNAP button, and not in LIVE
mode. Touch the OK button to save all preferences and go back to the main screen, or the Cancel button to go
back to the main screen without saving changes.
VisiDoc-It Imaging System 12
Tool/Function
Procedure
Adjust exposure
2. Adjust the exposure time by first selecting the time interval. Touch on the
3. To view overexposed pixels, touch the EXP WARN button. Overex posed
4. To add a date stamp to the image, touch the TIME STAMP button. This will
TIME STAMP
EXP WARN
PREF
Windows Icon OFF (X) – Shuts
PRINT - Calls up SAVE
SNAP
LIVE Decrease
Status Bar

Min / Sec / mSec

Increase integration

Identifying the Touch Screen Functions and Tools

Using the software touch screen allows convenient selection of image capture, save, print and other functions of the system. Callouts are provided below to briefly describe the buttons.
Preview an image before snapping it
Capture an image
Store the captured image
the Print dialog box to choose print options
down the TS software
integration time

Using the Functions and Tools

Adds a date stamp to the image as follows: UVP####mm/dd/yy
Indicates mode of operation and exposure time
In Live Mode, the system will show overexposed pixels in yellow (overexposure) or red (high overexposure)
Navigate to the Preferences screen
Touch icon to go access the Windows desktop
Display time interval
time
1. To see a preview of the image before snapping it, touch the LIVE button.
time
LIVE mode will be indicated in the status bar.
corresponding bars, Minutes, Seconds, milliSeconds, from left to right, respectively. These bars will be animated in LIVE/SNAP mode to show progress as time elapses. Decrease or increase the time by touching the minus or plus button respectively.
pixels will be identified with a yellow or red color, depending on the how saturated they are.
add UVP#####mm/dd/yy at the bottom right corner of the image. This information is NOT burned into the image unt il the image is s av ed.
VisiDoc-It Imaging System 13
5. To snap (capture) the image, touch the SNAP button. NOTE: When using
6. Touch the SAVE button to save the image to the location specified in the
7. Print the image (if a printer is installed) by touching the PRINT button and
Status bar
8. Status bar indicat es the mod e s of operat ion : IDLE, LIVE or CAPTURE.

Managing Files

X
Min. Sec. MSec
the SNAP button, if the Auto Save function is enabled, the image will automatically be saved.
Preferences. The file name is assigned automatically by the software as
UVP#####mmddyyyy.*
NOTE: Once an image is saved, the user cannot open the image with the
software. TIFF images can be opened by VisionWorks or comparable software (contact UVP Tech Support for recommendations). JPEG and GIF files can be opened with many Microsoft or comparable programs.
clicking OK at the print dialog box.
modes
Minutes, seconds, milliseconds bars display time progress. Each field
(Min, Sec, Msec) displays the current exposure time and the start of the current exposure being taken. The large portion of each field indicates the current exposure status. The smaller portion to the right indicates the current exposure setting.
9. To go Microsoft Windows, touch the WINDOWS ICON located at the bottom right corner of the screen. To turn off the system, shut down from Windows or push the MAIN POWER button.
To close the software, click the X in the bottom left corner of the screen.

Find and View Images

The TS System allows the user to save images in several locations. The location is selected in the PREF screen. The system has a built-in hard drive with at least 25 GB of storage space that can be used.
To save images in the USB drive, make sure a USB drive is plugged in. If one is not plugged in, the TS software will automatically prompt the user for a location.

Viewing Images

It is not possible to view saved images on the software screen. To view images captured and saved from the TS system, different software is required.
To view 8-bit JPEG or GIF images, exit to Windows and open Windows Image Viewer or other comparable software program. To exit the TS software interface and go to Microsoft Windows, touch the WINDOW ICON located at the bottom right corner.
To view 16-bit TIFF images, o pen Visio nWorksLS or comparable program (contact UVP Tech Support for recommendations). VisionWorksLS may be included with the system. To check, go to Start > All Programs > UVP > VisionWorks or look for the VisionWorks icon on the desktop.
VisiDoc-It Imaging System 14
Network

Connecting to a Network

The TS System has built-in networkability. While it is fairly simple to connect the
Connectivity
device to the network, it is highly recommend to obtain assistance from your network administrator.
Follow the Microsoft or local standard network protocols for network configuration. To exit the TS software interface and go to Microsoft Windows, touch the WINDOWS ICON located at the bottom right corner of the main screen.

Install Drivers or Additional Software

Installing Drivers
or Additional
Software
In the event that additional drivers or VisionWorksLS software need to be installed on the system, exit the TS software interface and go to Microsoft Windows by pressing the WINDOWS ICON button located at the bottom right corner of the main screen.
To install drivers or additional software, copy to a USB storage device, open Windows Explorer in TS and run the desired program. The system can accept USB as a method of software installation.
VisiDoc-It Imaging System 15

Service Procedures

Return Procedure

A Returned Goods Authorization (RGA) number must be obtained from UVP Customer Service before returning any product.

Replacement Parts and Accessories

To order accessories or replacement parts for the VisiDoc-It S y ste m, con t a ct UV P’s o ff i ce s.
Part Description Part Number
Filter, Ethidium Bromide, 50mm Square 38-0220-01 Filter, SYBR Green, 50mm Square 38-0219-01 Filter, SYBR Gold, 50mm Square 38-0221-01
White Light Converter Plate, 21x26cm 38-0191-01 White Light Converter Plate, 25x26cm 38-0191-04 Visi-Blue Converter Plate, 21x26cm 38-0200-01 Visi-Blue Converter Plate, 25x26cm 38-0200-04
Gel-Cutter 85-0002-01 Gel-Ruler 85-0003-01 Gel-Scooper 85-0006-01 Gel-Tray, small 85-0007-01 Gel-Sentry DNA Preparation Plate 97-0076-01 Fluorescent Standard Step Tablet 33-0014-02
Doc-It®LS Analysis Software 97-0185-02 Spectacles, UV Blocking (UVC-303) 98-0002-01
Goggles, UV Blocking (UVC-503) 98-0002-02 Faceshield, UV Blocking (UVC-803) 98-0002-04

Troubleshooting

No Power to the Darkroom

Recheck main power cord connections to the darkroom . Check fuses, located at the back of the unit, near the power port. You will need a flat-head screwdriver. Turn
the cap and the fuse holder will “pop-out”. Inspect the thin wire within the glass fuse to see if there is a break in the wire. If so, replace fuse(s). If fuses are blown repeatedly, contact UVP Technical Support Department for additional troubleshooting.
No Image on the LCD Screen
To power up the system, push once on the button located on the left side of the unit.
Touch Screen not Accurate
If touching or clicking on the buttons becomes inaccurate, you may need to recalibrate your touch screen. Please follow all instructions in the touch screen calibration instructions included in your TS software CD.
VisiDoc-It Imaging System 16
If you are in North America, S outh
If you are in Europe, Africa, the
Call (800) 452-6788 or (909) 946-
Call +44(0) 1223-42002, and ask for E-mail your message to:
E-mail your message to: uvp@uvp.co.uk
Fax Customer Service, and send it to
Fax Customer Service, and send it to:
Write to: UVP, LLC 2066 W. 11th
Write to: Ultra-Violet Products Ltd
Error Messages Pop Up on the Screen
Messages appear on the screen that might be related to the TS software interface, or Microsoft Windows. If the message is related to Microsoft Windows, such as a reminder to activate or update your copy of Windows, please contact your system administrator for assistance.
If an error message appears repetitively, and your system administrator does not recognize it as a Microsoft Windows error, contact UVP Technical Support for further assistance.
Technical Support
UVP offers technical support on all of its products. If you have any questions about the product’s use, operation or repair, please contact our offices at the locations below. Or go to UVP’s web site and click the Tech Support > BioImaging Systems.
Warranty
UVP's products are guaranteed to be free of defects in materials, workmanship and manuf actu re for two (2) years from date of purchase. Consumable and di sposab le par t s includ ing, but not l imited to t ubes and filters, are guaranteed to be free from defects in manufact ure and ma ter ials for ninety (90) days from date of purchase. Transilluminators carry a tw o (2) year war ranty from date of purchas e. If equipment failure or malfunction occurs during the warranty per iod, UV P shall ex amine the inoperat iv e equipment and hav e the option of repairing or replacing any part(s) w hich, in the judgm ent of U VP , wer e originally defectiv e or became so under conditions of normal usage and service.
No warranty shall apply to this instrument, or part thereof, that has been subject to accident, n egligence, alteration, abuse or misuse by the end-user. Moreover, UVP makes no warranties whatsoev er w ith r espect to parts not supplied by UVP or that have been installe d, used an d/or serv iced other than in strict compliance with instructions appearing in this manual.
In no event shall UVP be responsible to the end-user for any incidental or consequential damages, whether foreseeable or not, including but not limited to property damage, inability to use equipment, lost business, lost profits, or inconvenience arising out of or connected with the use of instruments produced by UVP. Nor is UVP liable or responsible for any personal injuries occurring as a result of the use, installation and/or servicing of equipment.
This warranty does not supersede any statutory r ights that may be av ailable in certain countries.
America, East Asia or Australia:
3197, and ask for Customer Service
during regular business days, between 7:00 am and 5:00 pm, PST.
techsupport@uvp.com
(909) 946-3597
Street, Upland, CA 91786 USA
VisiDoc-It is a trademark of UVP , LLC. Doc-It is a registered trademark of UVP, LLC.
Middle East of Western Asia:
Customer Service during regular
business days between 9:00 am and 5:30 pm.
+44(0) 1223-420561
Unit 1, Trinity Hall Farm Estate, Nuffield
Road, Cambridge CB4 1TG UK
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