Thermo Fisher Scientific MPK5000, MPK1025, MPK1096, MPK10025, MPK10096 User Manual

Neon™ Transfection System
USER GUIDE
For transfecting mammalian cells, including primary and stem cells, with high transfection eciency
Catalog Numbers MPK5000, MPK1025, MPK1096, MPK10025, MPK10096
For Research Use Only. Not for use in diagnostic procedures.
Manufacturer: Life Technologies Corporation | 5781 Van Allen Way | Carlsbad, California 92008 USA
The information in this guide is subject to change without notice.
DISCLAIMER: TO THE EXTENT ALLOWED BY LAW, THERMO FISHER SCIENTIFIC INC. AND/OR ITS AFFILIATE(S) WILL NOT BE LIABLE FOR SPECIAL, INCIDENTAL, INDIRECT, PUNITIVE, MULTIPLE, OR CONSEQUENTIAL DAMAGES IN CONNECTION WITH OR ARISING FROM THIS DOCUMENT, INCLUDING YOUR USE OF IT.
Revision history: Pub. No. MAN0001557
Revision Date Description
B.0 1 March 2021 Update for RoHS2 compliance and SKU list A.0 11 July 2014 New document
Important Licensing Information: These products may be covered by one or more Limited Use Label Licenses. By use of these products, you accept the terms and conditions of all applicable Limited Use Label Licenses.
TRADEMARKS: All trademarks are the property of Thermo Fisher Scientific and its subsidiaries unless otherwise specified.
©2021 Thermo Fisher Scientific Inc. All rights reserved.

Contents

CHAPTER 1 Product information .................................................. 6
Product description ............................................................. 6
Features ................................................................... 6
Upon receiving the device ........................................................ 7
Unpacking instructions ...................................................... 7
Product contents ................................................................ 7
Neon™ transfection system contents .......................................... 7
Neon™ kit contents .......................................................... 8
System components ............................................................. 9
Neon™ device .............................................................. 9
Neon™ pipette station ...................................................... 10
Neon™ Kits ................................................................ 10
System overview ............................................................... 11
Description of parts ............................................................ 12
Neon™ device ............................................................. 12
Neon™ pipette ............................................................. 12
Neon™ pipette station ...................................................... 13
Neon™ tube ............................................................... 13
Neon™ tips ................................................................ 14
CHAPTER 2 Methods ............................................................. 15
Getting started ................................................................ 15
General guidelines ............................................................. 23
Transfection System User Guide
Neon
Install the Neon™ device with pipette station .................................. 15
Register the device ........................................................ 17
Electroporation protocol options ............................................. 17
Input values limit .......................................................... 17
Input window ............................................................. 18
Database window .......................................................... 19
Optimization window ....................................................... 21
Upgrade the firmware ...................................................... 22
Recommended kits ........................................................ 23
Recommended buers ..................................................... 23
DNA quality and amount .................................................... 24
3
Contents
siRNA quality and amount .................................................. 24
Controls .................................................................. 24
Using the Neon™ Transfection System ............................................ 25
Materials needed .......................................................... 25
Set up the Neon™ pipette station ............................................ 26
Prepare adherent cells ...................................................... 27
Prepare suspension cells ................................................... 28
Electroporation protocol .................................................... 29
Optimization .............................................................. 33
Cleaning and maintenance .................................................. 33
Optimization protocol for DNA and siRNA ......................................... 33
Materials needed .......................................................... 33
General guidelines ......................................................... 34
24-well optimization protocol for adherent and suspension cell lines—day one .... 34
18-well optimization protocol for primary suspension blood cells—day one ....... 36
Optimization protocol—day two ............................................. 38
Optional: optimization protocol—day three .................................... 40
APPENDIX A Troubleshooting .................................................... 42
Troubleshooting ................................................................ 42
Neon™ device error messages ................................................... 46
APPENDIX B Maintenance ....................................................... 47
Repackaging the instrument ..................................................... 47
Repackaging and storage instructions ........................................ 47
Replace the Pipette Gripper ..................................................... 48
APPENDIX C Specifications ...................................................... 51
Product specifications .......................................................... 51
APPENDIX D Related products .................................................. 52
Accessory products ............................................................ 52
Additional products ........................................................ 52
Cell culture media ......................................................... 53
siRNA .................................................................... 53
APPENDIX E Safety ............................................................... 54
Safety information .............................................................. 54
Informational symbols .......................................................... 54
Informations de sécurité ........................................................ 55
Informational symbols .......................................................... 56
4
Neon™ Transfection System User Guide
Chemical safety ................................................................ 57
Biological hazard safety ......................................................... 58
APPENDIX F Documentation and support ...................................... 59
Customer and technical support ................................................. 59
Limited product warranty ........................................................ 59
Contents
Neon™ Transfection System User Guide
5
1

Product description

The Neon™ Transfection System is a novel, benchtop electroporation device that employs an electroporation technology by using the pipette tip as an electroporation chamber to eciently transfect mammalian cells including primary and immortalized hematopoietic cells, stem cells, and primary cells.
The Neon™ Transfection System eciently delivers nucleic acids, proteins, and siRNA into all mammalian cell types including primary and stem cells with a high cell survival rate. The transfection is performed using as few as 1 × 104 or as many as 5 × 106 cells per reaction using a sample volume of 10 µL or 100 µL in a variety of cell culture formats (60 mm, 6-well, 48-well, and 24-well).
The Neon™ Transfection System uses a single transfection kit (Neon™ Kit) that is compatible with various mammalian cell types including primary and stem cells thereby avoiding the need to determine an optimal buer for each cell type.
The Neon™ Transfection System oers open and transparent protocols that are optimized for ease of use and simplicity. The Neon™ device is preprogrammed with one 24-well optimization protocol to optimize conditions for your nucleic acid/siRNA and cell type, or you can program and store up to 50 cell-specific protocols in the Neon™ device database. Optimized protocols for many commonly used cell types are also available at https://www.thermofisher.com/us/en/home/life-science/cell-culture/
transfection/neon-transfection-system/neon-transfection-system-cell-line-data.html to maximize
transfection eciencies for your cell types.
Product information
See “Description of parts” on page 12 for details on various parts of the system.

Features

Important features of the Neon™ Transfection System are listed below:
User-friendly Neon™ device benchtop design that easily fits in your tissue culture hood for easy, ecient transfection of a wide variety of mammalian cells including primary and stem cells
Ability to transfect 1 × 104–5 × 106 cells per reaction in a sample volume of 10 µL or 100 µL in a variety of cell culture formats (60 mm, 6-well, 48-well, and 24-well)
Utilizes a single buer system for all cell types except primary suspension blood cells Simple touch screen interface for easy programming of electroporation parameters Available with one pre-programmed 24-well optimization protocol and the option to customize up
to 50 cell specific protocols Built-in safety features in the device to enhance user safety
6
Neon™ Transfection System User Guide

Upon receiving the device

Examine the unit carefully for any damage incurred during transit. Any damage claims must be filed with the carrier. The warranty does not cover in-transit damage. To register the device, activate your warranty, and be notified of important updates, go to thermofisher.com.

Unpacking instructions

Chapter 1 Product information
Upon receiving the device
1
Consult the following instructions to unpack the Neon™ Transfection System. The weight of the Neon device is 13.2 pounds (6 kg).
1.
Cut the plastic straps and remove the outer box. Save the outer box and other packaging material (in case you need to transport or ship the unit).
2.
Remove the plastic bag containing the manual, the Neon™ Pipette box containing the pipette, and then remove the plastic bag containing the power cords from the box.
3.
Remove the Neon™ device and the Neon™ pipette station from the box and place them on a flat, level surface.
4.
Set up the Neon™ Transfection System as described on page 15.

Product contents

Neon™ transfection system contents

The contents of the Neon™ Transfection Systems are listed in the following table. The Neon Transfection System is shipped at room temperature.
See page 12 for specifications and description of the Neon™ Transfection System, and page 15 to set up the device.
Neon™ Transfection Device 1
Specific Power Cord
(for US/Canada/Taiwan/Japan, Europe, and UK)
Neon™ Pipette 1
Neon™ Pipette Station 1
User Guide 1
USB Memory Device 1
Neon™ Transfection System User Guide
Product
Quantity
4
7
Chapter 1 Product information
1
Product contents

Neon™ kit contents

The Neon™ Kits are used with the Neon™ Transfection Systems for ecient transfection of mammalian cells and are available as standalone products (see “Accessory products” on page 52). The kits consist of two components which are not sold individually (a Tips/Tubes Kit, and a Buer Kit), and are available in two formats (for electroporation of 10 µL samples, and 100 µL samples).
Neon™ Kit components are listed in the following table, and are shipped at room temperature.
After receiving the kit, store buers at 4 and tips/tubes at room temperature.
Neon™ Kit, 10 µL Neon™ Kit, 100 µL
Item
Tips/Tubes Kit
Neon™ Tips 25 tips (10 µL) 96 tips (10 µL) 25 tips (100 µL) 96 tips (100 µL)
Neon™ Tubes 5 20 5 20
Buer Kit
Resuspension Buer R (Proprietary)
Resuspension Buer T (Proprietary)
Electrolytic Buer E (Proprietary)
Electrolytic Buer E2 (Proprietary)
Cat. No.
MPK1025
(50 reactions)
MPK1025K MPK1096K MPK10025K MPK10096K
MPK1025B MPK1096B MPK10025B MPK10096B
1 mL 3 × 1 mL 10 mL 30 mL
1 mL 3 × 1 mL 10 mL 30 mL
75 mL 2 × 150 mL
75 mL 2 × 150 mL
Cat. No.
MPK1096
(192 reactions)
Cat. No.
MPK10025
(50 reactions)
Cat. No.
MPK10096
(192 reactions)
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Neon™ Transfection System User Guide

System components

1
2
1
3 4
5
6

Neon™ device

Chapter 1 Product information
System components
1
The Neon™ device is a simple, user friendly benchtop electroporation device. It is used with the Neon Pipette Station and Neon™ Kits to eciently transfect mammalian cells including primary and stem cells. See “Description of parts” on page 12 for details.
Front view
Touchscreen
1
Rear view
USB port panel for USB memory device (unscrew the
1
panel to access the port) High voltage port (connect to the high voltage
2
connector of the Neon™ Pipette Station) Sensor port (connect to the sensor connector of the
3
Neon™ Pipette Station)
Power switch
4
AC inlet (connect to the power cord, and plug into the
5
power outlet on the wall) Fan
6
Neon™ Transfection System User Guide
9
2
1
3
2
1
Chapter 1
1
System components
User interface
Product information
Digital Display shows the protocol in use and various
1
protocol parameters

Neon™ pipette station

The Neon™ Pipette Station is a unique component of the system that holds the Neon™ Pipette during electroporation, and protects the user from any electrical shock exposures. A high voltage and sensor connector which connects the pipette station to the Neon™ device. See “Description of parts” on
page 12 for details.
Connector cable
1
Sensor connector
2
Touchscreen buttons to operate the device
2
High voltage connector
3

Neon™ Kits

The Neon™ Kits (not supplied with the device) contain the Neon™ Tips, Neon™ Tubes, and buers for electroporation. The Neon™ Kits are available in two formats for electroporation of 10 µL or 100 µL samples (See page 52 for ordering information). See page 12 for details on Neon™ Tips and Tubes.
10
Neon™ Transfection System User Guide

System overview

Unlike standard cuvette based electroporation, the Neon™ Transfection System uses a unique electroporation reaction chamber, the Neon™ Tip that delivers a high electric field to the biological sample. The Neon™ Tip maximizes the gap size between the two electrodes while minimizing the surface area of each electrode. As a result, the sample experiences a more uniform electric field, minimal pH change, less ion formation, and negligible heat generation.
This next generation electroporation technology overcomes many of the limitations associated with standard cuvette based electroporation thereby increasing transfection eciency and cell viability, and providing an ergonomic workflow.
Chapter 1 Product information
System overview
1
The transfection occurs in the uniquely designed Neon™ Tip using simple 3-step procedure.
1.
Load a mixture of harvested cells and molecules to be delivered (e.g., DNA, RNA, siRNA) into the Neon™ Tip.
2.
Plug the Neon™ Pipette with Neon™ Tip into position in the Neon™ Pipette Station with Neon Tube; select your protocol on the device, and press Start.
3.
Unplug the Neon™ Pipette and transfer your transfected cells into a tissue culture vessel containing the appropriate medium.
Neon™ Transfection System User Guide
11
Chapter 1 Product information
1

Description of parts

Description of parts

Neon™ device

The Neon™ Device employs the pipette tip as an electroporation chamber to eciently transfect mammalian cells including primary and immortalized hematopoietic cells, stem cells, and primary cells. The device is preprogrammed with a 24-well optimization protocol and supports a database to store up to 50 user-specified protocols.
See page 9 for a front and rear view of the device.

Neon™ pipette

The Neon™ Pipette utilizes a positive displacement pipette mechanism for pipetting mixtures containing cells and nucleic acid or siRNA. The Neon™ Pipette is a fixed volume pipette and permanently calibrated at the manufacturing stage and does not require any further calibration.
The Neon™ Pipette is designed for use with Neon™ Tips only. Do not use any other tips with the Neon™ Pipette.
12
Neon™ Transfection System User Guide

Neon™ pipette station

1
2
3
1
2
Chapter 1 Product information
Description of parts
1
The Neon™ Pipette Station holds a Neon™ Pipette during electroporation procedures. The Neon Pipette Station is equipped with many safety sensors and protection mechanisms that protect the user from any exposures to an electrical shock. The Neon™ Pipette Station is connected to the Neon device using the high voltage and sensor connector (see page 15 for details).
The Neon™ Pipette Station also holds the Neon™ Tube which has an electrode near the bottom that transfers the electric field from the electrode inside the Neon™ Tip.
Connector cable
1
Area to insert the Neon™ Tube
2

Neon™ tube

The Neon™ Tube holds the Electrolytic Buer during electroporation and is inserted into the Neon Pipette Station. The Neon™ Pipette with the Neon™ Tip is then inserted into the Neon™ Tube which has an electrode near the bottom that transfers the electric field from the electrode inside the Neon™ Tip. The Neon™ Tubes are supplied with Neon™ Kits as well as available separately (see page 52).
Neon™ Pipette Station
3
To avoid contamination, we strongly recommend using the tubes for a maximum of 10 times only.
We recommend changing tube and buer when switching to a dierent plasmid DNA/siRNA or cell type.
Tube Specifications:
Material: Polystyrene
Capacity: 2.5–4 mL
Electrode
1
Buer
2
Neon™ Transfection System User Guide
13
1
2
3
4
Chapter 1 Product information
1
Description of parts

Neon™ tips

The Neon™ Tips are disposable tips composed of a tip and piston used with the Neon™ Pipette. The Neon™ Tips contain a gold-plated electrode to create a disposable electric chamber for the delivery of a high electric field to biological samples. The Neon™ Tips are supplied with Neon™ Kits in two formats to support operating volumes of 10 µL and 100 µL, respectively (see page 52 for ordering information).
To ensure repeatability and eliminate variation of the transfection conditions within or between experiments, we recommend that you do not use the Neon™ Tip for more than 2 times. Oxide
formation at the piston surface area can be generated if the tips are used more than 2 times, which decreases electrode function of the piston.
Tip specifications:
Material: Polypropylene
Capacity: 10 µL or 100 µL
Mounting stem
1
Piston
2
Gold electrode
3
Tip
4
14
Neon™ Transfection System User Guide
2

Getting started

Install the Neon™ device with pipette station

1.
Unpack the Neon™ device as instructed in “Unpacking instructions” on page 7.
2.
Four power cords are shipped with the device to ensure that the cord you use is compatible with your local socket format.
3.
Place the Neon™ device on a level laboratory bench. Keep the area around the unit clear to ensure proper ventilation of the unit.
Note: The Neon™ device has a small footprint and can be easily set up in the tissue culture hood for convenience.
Methods
4.
For your safety: Position the device properly such that the power switch and AC inlet located on the rear of the unit (see page 9) are easily accessible. Be sure to position the device such that it is easy to disconnect the unit.
Note: Since Neon™ device is air-cooled, its surface may become hot during operation. When installing the device, leave a space of more than 10 cm from the back of the device.
5.
Place the Neon™ Pipette Station near the Neon™ device.
Neon™ Transfection System User Guide
15
Chapter 2 Methods
2
Getting started
6.
Connect the high voltage and sensor connector on the Neon™ Pipette Station to high voltage port and sensor port on the rear side of Neon™ device, respectively.
Be sure to align the ridge indicated by a white arrow on the sensor connector on the Neon™ Pipette Station with a groove indicated by a white dot on the sensor port of the Neon™ device (see figure for details).
IMPORTANT! To connect or disconnect the sensor connector to the Neon
handle the sensor connector using the cord plug and not the cord cable.
7.
Ensure the AC power switch is in the O position ( see page 9).
device, always
16
Neon™ Transfection System User Guide
Chapter 2
8.
Attach the power cord to the AC inlet on the rear of the Neon™ device and then to the electrical outlet. Use only properly grounded AC outlets and power cords.
9.
To turn on the power, press the main power switch on the rear of the unit to ON position. The digital display shows start up screen (see page 17).
10.
The Neon™ device is operated by the touch screen on the front of the device. You can easily input electroporation parameters by lightly touching the touch screen with a fingertip or a touch screen pen. See 17 for details.
Methods
Getting started
2
You are ready to use the Neon™ Transfection System. See page 25 for details.

Register the device

Visit thermofisher.com to register the device and activate your warranty or extended warranty, and ensure that you receive product updates, special oers, and faster service.

Electroporation protocol options

There are three options to select an electroporation protocol for your cell type:
If you already have the electroporation parameters for your cell type, input the parameters in the Input Window (see page 17).
If you wish to add cell-specific electroporation parameters to the database on the device for future use, input the parameters in the Database Window (see page 19). You can also view our library of protocols for commonly used cell types from thermofisher.com and in put the parameters in the Database Window (see below) for various cell types.
If you do not have any specific electroporation parameters for your cell type and wish to perform optimization, use the Optimization Window (see page 21).

Input values limit

The Neon™ device is designed to only input certain values and limits for each value are listed below. If your input value exceeds the maximum value, an error is displayed.
Input Voltage range: 500–2,500 V
Input Pulse Width range: 1–100 ms
Input Pulse Number range: 1–10
Neon™ Transfection System User Guide
17
2
Chapter 2
Getting started
Methods

Input window

To create a cell specific protocol, if you already have the electroporation parameters for your cell type:
1.
Press the power switch (located at the rear of the unit, see page 9) to turn ON the Neon™ device. The unit checks to ensure that the Neon™ Pipette Station is connected to the device and then the start up screen is displayed.
2.
Press Voltage to activate the number key pad to input voltage value. Press the desired voltage value and press Done to save the value.
Note: If any input value is out of the limit, an error message is displayed and the lowest value of limit is automatically set.
3.
Press Width to activate the number key pad to input width value. Press the desired width value and press Done to save the value.
18
4.
Press Pulses to activate the number key pad to input pulse value. Press the desired pulse value and press Done to save the value.
5.
If you wish to save these electroporation parameters, press Save on the main screen to save the protocol in the database.
Neon™ Transfection System User Guide
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