Thermo Fisher Scientific HyPerforma APPLICATION NOTE

APPLICATION NOTE HyPerforma Single-Use Fermentors
End-user evaluation of 30 L and 300 L HyPerforma Single-Use Fermentors and scale-down model
Summar y
In moving processes from bench to pilot and ultimately production fermentors, it is critical to have a reliable scaledown model. The purpose of a scale-down model is to demonstrate at the benchtop level what can be achieved in production-scale fermentors. Scale-down models can vary depending on the media, strain, and process conditions. In this case, a customer wanted a scale-down model of the Thermo Scientific™ HyPerforma™ Single-Use Fermentor (S.U.F.) in order to establish what fermentation processes could be scaled into the S.U.F., in particular for the production of plasmid DNA. The 300 L S.U.F. exceeded the customer’s expectations. The customer anticipated that the test process using E. coli with high oxygen consumption would reach a final OD of ~80 and the HyPerforma S.U.F. exceeded expectations by reaching an OD of 147.
This application also was a successful demonstration of media preparation through culture harvest, using a jacketed 50 L Thermo Scientific™ HyPerforma™ Single-Use Mixer (S.U.M.) (60 L working volume and heated to 67°C), 200 L Thermo Scientific™ HyPerforma™ DS 300 Single-Use Mixer (S.U.M.), Thermo Scientific™ Powdertainer™ BioProcess Container (BPC) system, 2 L—50 L Thermo Scientific™ 2D Labtainer™ BPC systems, pre-irradiated filters, sterile funnel BPC, seed BPC, 30 L and 300 L HyPerforma S.U.F.s, and Thermo Scientific™ CentriPAK™ harvest BPCs.
Purpose
To evaluate the 300 L HyPerforma S.U.F. for GMP plasmid production process using a customer’s standard evaluation procedure and test strain.
Procedure
After scaling up the model procedure to the 300 L S.U.F., the power-to-volume input, kLa, and gassing rates were scaled down into the 1 L glass fermentors. The same original procedure was then followed but using the scaled­down power-to-volume input, kLa, and gassing rates for S.U.F. comparison. The scale-down model could then be used for estimating performance with all production strains for this customer.
The procedure was then repeated with the 30 L S.U.F. and showed scalability within the HyPerforma product line.
After evaluating additional leading single-use fermentors from two other suppliers, the customer purchased the Thermo Scientific 300 L HyPerforma S.U.F..
E. coli cells were collected with the Sorvall BIOS 16 centrifuge using CentriPAK BPC singles with quick connect at 5,373 x g for 15 minutes in 15 L batches. The 30 L S.U.F. was harvested as closed system in two batches using CentriPAK manifolds. The 300 L S.U.F. was harvested within 3 hours using two BIOS 16 centrifuges and CentriPAK singles filled to about 1.87 L each.
During this feasibility study, the off-gas analyses of the cultures were compared. It was noticed that the off-gas trend was comparable. The off-gas analyzer sample line to each S.U.F. can be placed inside the exhaust filter exit cavity or connected to a small sterile filter connected to the S.U.F.’s filter chamber.
Equipment and supplies
Strain:
• HMS174(DE3)
Chemicals:
• Base
• Acid
• Antifoam C8840 (New London Chemicals)
• 60 L nitrogen source, 30% w/v feed solution
• 50 L carbon source, 50% w/v feed solution
• Batch medium
Bioreactor setup
The S.U.F. systems were set up according to the user guide and controlled by Thermo Scientific™ TruBio™ Software, powered by powered by the DeltaV™ Distributed Control Platform from Emerson, utilizing the Thermo Scientific™ TruFluor DO single-use sensors and Hamilton or Mettler Toledo single-use pH sensors. Operating parameters are listed in Table 2.
Bioreactor inoculum, cultivation, and scale-up
The inoculum was cultured in an incubator at 37°C, 250 rpm, 1 inch arc, and for 16 hr.
Table 1. Equipment and materials.
Description Cat. No.
30 L S.U.F. Hardware S.U.F.0030.AAA.BAAABB0C00
30 L S.U.F. BPC SH3B11722.01
300 L S.U.F. Hardware S.U.F.0300.AAA.DAAABB0C00
300 L S.U.F. BPC SH3B11861.01
100 L S.U.M., jacketed with touchscreen console
200 L plastic drum SH30959.03
Drum dolly SH30958.01
Nalgene
Nalgene cylindrical 5 gal tank
1.5 L funnel SH3B14865.01
PowderFill or funnel stand 129752
HQ incubator shaker 11-676-235
Seed BPC (3 L working volume)
Seed BPC clip 122554
0.5, 1, 2, 5, 10, and 50 L Labtainer BioProcess Container (BPCs)
Powdertainer BPCs SH30737.01 and SH30737.02
HyPerforma
Prima
Bios 16 Sorvall Bioprocessing Centrifuge
CentriPAK BPC Adapter
2 L bucket liner
CentriPAK BPC 6 x
1.7 L harvest manifold
CentriPAK BPC Single with
Quick connect
polyethylene 5 gal tank liner 11100-0005
G3 Controllers NA
BT o-gas analyzer NC1256292
SUM0100.9002
43050-0005
SH3B9830.01
SH30712.01-.02 and SH30963.01-.03
2 x L85007685
4 x 75003873
2 x 75003880
14 x 75003891
Table 2. 30 L and 300 L S.U.F. operating conditions.
Parameter 30 L 300 L
Initial volume 24 L 240 L
Final volume ~30 L ~300 L
Temperature 37°C 37°C
pH 7.0 ± 0.05 7.0 ± 0.05
Agitation
300–600 RPM 200–375 RPM
DO setpoint 30% 30%
DO cascade Cascade
RPM, air, then supplement
Cascade RPM, air, then supplement oxygen
oxygen
Gas flow 3–60 standard
30–500 slpm liter per min (slpm)
Antifoam 3 mL, more as
foam detected
30 mL initially, more
as foam detected
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