Unless you request and receive written permission from SUPER MICRO COMPUTER, INC., you
may not copy any part of this document.
Information in this document is subject to change without notice. Other products and companies
referred to herein are trademarks or registered trademarks of their respective companies or mark
holders.
The information in this User’s Manual has been carefully reviewed and is believed to be accurate.
The vendor assumes no responsibility for any inaccuracies that may be contained in this document,
makes no commitment to update or to keep current the information in this manual, or to notify any
person or organization of the updates. Please Note: For the most up-to-date version of this
manual, please see our web site at www.supermicro.com.
Super Micro Computer, Inc. ("Supermicro") reserves the right to make changes to the product
described in this manual at any time and without notice. This product, including software, if any,
and documentation may not, in whole or in part, be copied, photocopied, reproduced, translated or
reduced to any medium or machine without prior written consent.
IN NO EVENT WILL SUPER MICRO COMPUTER, INC. BE LIABLE FOR DIRECT, INDIRECT,
SPECIAL, INCIDENTAL, SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE
USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION, EVEN IF ADVISED OF
THE POSSIBILITY OF SUCH DAMAGES. IN PARTICULAR, SUPER MICRO COMPUTER, INC.
SHALL NOT HAVE LIABILITY FOR ANY HARDWARE, SOFTWARE, OR DATA STORED OR USED
WITH THE PRODUCT, INCLUDING THE COSTS OF REPAIRING, REPLACING, INTEGRATING,
INSTALLING OR RECOVERING SUCH HARDWARE, SOFTWARE, OR DATA.
Any disputes arising between manufacturer and customer shall be governed by the laws of Santa
Clara County in the State of California, USA. The State of California, County of Santa Clara shall
be the exclusive venue for the resolution of any such disputes. Super Micro's total liability for all
claims will not exceed the price paid for the hardware product.
FCC Statement: This equipment has been tested and found to comply with the limits for a Class A
digital device pursuant to Part 15 of the FCC Rules. These limits are designed to provide reasonable protection against harmful interference when the equipment is operated in a commercial
environment. This equipment generates, uses, and can radiate radio frequency energy and, if not
installed and used in accordance with the manufacturer’s instruction manual, may cause harmful
interference with radio communications. Operation of this equipment in a residential area is likely
to cause harmful interference, in which case you will be required to correct the interference at your
own expense.
California Best rnia Best Management Practices Regulations for Perchlorate Materials: This Perchlorate warning applies only to products containing CR (Manganese Dioxide) Lithium coin cells.
“Perchlorate Material-special handling may apply. See www.dtsc.ca.gov/hazardouswaste/perchlorate”
WARNING: Handling of lead solder materials used in this
product may expose you to lead, a chemical known to the
State of California to cause birth defects and other reproductive harm.
Page 3
PDSML-LN1+/PDSML-LN2+/PDSML-E+ motherboard. It supports single
Intel® Xeon® 3200/3000, Core™ 2 Duo Series, Pentium® D (Dual-Core), Pentium
4, and Celeron® D LGA (Land Grid Array) 775 Processors at system bus speeds of
1066/800/533 MHz. The processor is housed in a Flip-Chip Land Grid Array (FC-
LGA4) package that interfaces with the motherboard via an LGA775 socket. The
PDSML-LN1+/PDSML-LN2+/PDSML-E+ also supports Intel Hyper-Threading (HT)
technology, EM64T technology, Enhanced Intel SpeedStep® Technology (EIST) and
Matrix Storage Technology. Please refer to the motherboard specifi cations pages
on our web site (http://www.supermicro.com/products/motherboard/) for updates or
visit Intel's web site for processor support. This product is intended to be installed
and serviced by a professional technician.
Manual Organization
Chapter 1 describes features, specifi cations and detailed information about the
motherboard and the chipset.
Chapter 2 provides hardware installation instructions. Read this chapter when
installing the processor, memory modules and other hardware components into
the system.
Chapter 3 describes troubleshooting procedures for the video, the memory and the
system setup stored in CMOS if you encounter problems.
Chapter 4 includes an introduction to BIOS and provides detailed information on
running the CMOS Setup utility.
Appendix A and Appendix B list BIOS POST Error Codes and Messages. Ap-
pendix C provides Software Installation Instructions.
Conventions Used in the Manual
Special attention should be given to the following symbols for proper installation
of the components and to prevent damage done to the components or injury to
yourself:
Danger/Caution: Instructions to be strictly followed to prevent catastrophic
system failure or to avoid bodily injury.
Warning: Important information given to ensure proper system installation or
to prevent damage to the components.
Note: Additional Information given to differentiate various models or to ensure
correct system setup.
Preface
iii
Preface
About This Manual
This manu al i s wri t ten for s yste m int e grat o rs, P C te chnic ians and
knowledgeable PC users. It provides information for the installation and use of the
Page 4
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User’s Manual
Table of Contents
Preface
About This Manual ...................................................................................................... iii
Manual Organization .................................................................................................... iii
Conventions Used in the Manual .................................................................................. iii
Note: In the Windows OS environment, the Supero Doctor III settings take prece-
dence over the BIOS settings. When fi rst installed, Supero Doctor III adopts the
temperature threshold settings previously set in the BIOS. Any subsequent changes
to these thresholds must be made within Supero Doctor, since the SD III settings
override the BIOS settings. For the Windows OS to adopt the BIOS temperature
threshold settings, please change the SDIII settings to be the same as those set
in the BIOS.
Page 70
4-18
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
4-5 Security
Choose Security from the Phoenix BIOS Setup Utility main menu with the arrow
keys. You should see the following display. Security setting options are displayed
by highlighting the setting using the arrow keys and pressing <Enter>. All Security
BIOS settings are described in this section.
Supervisor Password Is:
This item indicates if a supervisor password has been entered for the system.
Clear means such a password has not been used and Set means a supervisor
password has been entered.
User Password Is:
This item indicates if a user password has been entered for the system. Clear
means such a password has not been used and Set means a user password has
been entered for the system.
Set Supervisor Password
When the item Set Supervisor Password is highlighted, hit the <Enter> key. When
prompted, type the Supervisor's password in the dialog box to set or to change
supervisor's password.
Set User Password
When the item Set User Password is highlighted, hit the <Enter> key. When
prompted, type the user's password in the dialog box to set or to change the
user's password.
Page 71
Chapter 4: BIOS
4-19
Fixed Disk Boot Sector:
This setting may offer some protection against viruses. Set to Write Protect prevent
viruses from writing data codes to the boot sector on the hard drive. The other
option is Normal.
Password on Boot:
When enabled, a password is required when the system boots up. The options are
Enabled (password required) and Disabled (password not required).
4-6 Boot
Choose Boot from the Phoenix BIOS Setup Utility main menu with the arrow keys.
You should see the following display. Highlighting a setting with a + or - will expand
or collapse that entry. See details on how to change the order and specs of boot
devices in the Item Specifi c Help window. All Boot BIOS settings are described in
this section.
Boot Priority Order/Excluded from Boot Order.
Use the Up and Down Arrow Keys to select a device. Use <+> and <-> keys to
move the device up or down. Use the <f> key or the <r> key to specify the devices.
You can also use the keys indicated above to specify the priority of the boot order
for a device or move a item from the category of "Excluded from Boot Order" to
the category of "Boot Priority Order" and vice versa. Please refer to the window of
"Item Specifi c Help" for details.
Boot List
Candidate
List
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PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
4-7 Exit
Choose Exit from the Phoenix BIOS Setup Utility main menu with the arrow keys.
You should see the following display. All Exit BIOS settings are described in this
section.
Exit Saving Changes
Highlight this item and hit <Enter> to save any changes you've made and to exit
the BIOS Setup utility.
Exit Discarding Changes
Highlight this item and hit <Enter> to exit the BIOS Setup utility without saving any
changes you may have made.
Load Setup Defaults
Highlight this item and hit <Enter> to load the default settings for all items in the
BIOS Setup. These are the safest settings to use.
Discard Changes
Highlight this item and hit <Enter> to discard (cancel) any changes you've made.
You will remain in the Setup utility.
Save Changes
Highlight this item and hit <Enter> to save any changes you made. You will remain
in the Setup utility.
4-20
Page 73
A-1
Appendix A: BIOS POST Messages
S
UPER PDSML-LN1+/LN2+
®
LGA 775 CPU
KB/MS
JLAN1
Intel
3000
Nor th Bri dge
Fan4
24-Pin ATX PWR
ICH7 R
South Bridge
8-pin PWR
Battery
USB 1/2
VGA
JLAN2
COM2
Floppy
DIMM 2B
PCI-E x8
BIOS
IDE
JP F
DIMM 1B
DIMM 2A
DIMM 1A
Fan1
J 8
Fan5
LAN
CTRL2
JPL2
JPL1
WOL
JWOR
Buzzer
JL 1
JI
2
C1
JB T1
SATA1
JPG1
Fan3
FP CTRL
JF 1
Fan2
USB3/4
LAN
CTRL1
SPKR
JI2C2
IPMI
Slot6
SBX: PC I-33 MHz
S I/O
VGA
CTRL
J1 0
PCI-E x4
Slot5
PCI1
Slot4
PCI-33 MHz
LE 3
COM1
VGA
Memory
LE 4
LE 1
JLED
Fan6
CP U
Fan
JPR1
PWR FaultPWR SMB
(*LN2+)
(*LN2+)
USB5/6
SATA0 SATA2
SATA3
Appendix A
BIOS POST Messages and LED Indicators
During the Power-On Self-Test (POST), the BIOS will check for problems. If a
problem is found, the BIOS will activate an alarm, turn on LED indicators, or display
a message.
A-1 BIOS POST Beep Codes
Beeps Error Messages
1 long beep-pause-1 long beep Memory Module Errors
1 long beep + 2 short beeps VGA Errors
1 long continuous beep (OH LED on) System Overheat
A-2 LE1: Standby PWR LED
A-3 LE3/LE4 System Debug Indicators
A-4 LED Locations
State LE3 Indicator LE4 Indicator
PWR-ON to POST
Green On Yellow On
ECC Memory Testing
Green Flash Yellow Flash
PCI Bus Initializing
Green On Yellow Flash
VGA Initializing
Green Flash Yellow On
System Normal
(After POST)
Off N/A Off N/A
LE1:
5V Standby PWR LED
Action
On
Standby PWR On Turn off the PWR supply before removing
or installing components
A. LE1
B. LE3
C. LE4
A
B
C
Page 74
A-2
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
A-5 BIOS Messages
Failure Fixed Disk
Fixed disk is not working or not confi gured properly. Check to see if fi xed disk is at-
tached properly. Run Setup. Find out if the fi xed-disk type is correctly identifi ed.
Stuck key
Stuck key on keyboard.
Keyboard error
Keyboard not working.
Keyboard Controller Failed
Keyboard controller failed test. May require replacing keyboard controller.
Keyboard locked - Unlock key switch
Unlock the system to proceed.
Monitor type does not match CMOS - Run SETUP
Monitor type not correctly identifi ed in Setup
Shadow Ram Failed at offset: nnnn
Shadow RAM failed at offset nnnn of the 64k block at which the error was de-
tected.
System RAM Failed at offset: nnnn
System RAM failed at offset nnnn of in the 64k block at which the error was de-
tected.
Extended RAM Failed at offset: nnnn
Extended memory not working or not confi gured properly at offset nnnn.
System battery is dead - Replace and run SETUP
The CMOS clock battery indicator shows the battery is dead. Replace the battery and
run Setup to reconfi gure the system.
Page 75
A-3
Appendix A: BIOS POST Messages
System CMOS checksum bad - Default confi guration used
System CMOS has been corrupted or modifi ed incorrectly, perhaps by an application
program that changes data stored in CMOS. The BIOS installed Default Setup Values.
If you do not want these values, enter Setup and enter your own values. If the error
persists, check the system battery or contact your dealer.
System timer error
The timer test failed. Requires repair of system board.
Real time clock error
Real-Time Clock fails BIOS hardware test. May require board repair.
Check date and time settings
BIOS found date or time out of range and reset the Real-Time Clock. May require
setting legal date (1991-2099).
Previous boot incomplete - Default confi guration used
Previous POST did not complete successfully. POST loads default values and offers
to run Setup. If the failure was caused by incorrect values and they are not corrected,
the next boot will likely fail. On systems with control of wait states, improper Setup
settings can also terminate POST and cause this error on the next boot. Run Setup
and verify that the waitstate confi guration is correct. This error is cleared the next
time the system is booted.
Memory Size found by POST differed from CMOS
Memory size found by POST differed from CMOS.
Diskette drive A error
Diskette drive B error
Drive A: or B: is present but fails the BIOS POST diskette tests. Check to see that
the drive is defi ned with the proper diskette type in Setup and that the diskette drive
is attached correctly.
Incorrect Drive A type - run SETUP
Type of fl oppy drive A: not correctly identifi ed in Setup.
Incorrect Drive B type - run SETUP
Type of fl oppy drive B: not correctly identifi ed in Setup.
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A-4
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
System cache error - Cache disabled
RAM cache failed and BIOS disabled the cache. On older boards, check the cache
jumpers. You may have to replace the cache. See your dealer. A disabled cache slows
system performance considerably.
CPU ID:
CPU socket number for Multi-Processor error.
EISA CMOS not writeable
ServerBIOS2 test error: Cannot write to EISA CMOS.
DMA Test Failed
ServerBIOS2 test error: Cannot write to extended DMA (Direct Memory Access)
registers.
Software NMI Failed
ServerBIOS2 test error: Cannot generate software NMI (Non-Maskable Interrupt).
Fail-Safe Timer NMI Failed
ServerBIOS2 test error: Fail-Safe Timer takes too long.
Device Address Confl ict
Address confl ict for specifi ed device.
Allocation Error for: device
Run ISA or EISA Confi guration Utility to resolve resource confl ict for the specifi ed
device.
CD ROM Drive
CD ROM Drive identifi ed.
Entering SETUP ...
Starting Setup program
Failing Bits: nnnn
The hex number nnnn is a map of the bits at the RAM address which failed the memory
test. Each 1 (one) in the map indicates a failed bit. See errors 230, 231, or 232 above
for offset address of the failure in System, Extended, or Shadow memory.
Page 77
A-5
Appendix A: BIOS POST Messages
Fixed Disk n
Fixed disk n (0-3) identifi ed.
Invalid System Confi guration Data
Problem with NVRAM (CMOS) data.
I/O device IRQ confl ict
I/O device IRQ confl ict error.
PS/2 Mouse Boot Summary Screen:
PS/2 Mouse installed.
nnnn kB Extended RAM Passed
Where nnnn is the amount of RAM in kilobytes successfully tested.
nnnn Cache SRAM Passed
Where nnnn is the amount of system cache in kilobytes successfully tested.
nnnn kB Shadow RAM Passed
Where nnnn is the amount of shadow RAM in kilobytes successfully tested.
nnnn kB System RAM Passed
Where nnnn is the amount of system RAM in kilobytes successfully tested.
One or more I2O Block Storage Devices were excluded from the Setup Boot
Menu
There was not enough room in the IPL table to display all installed I2O block-storage
devices.
Operating system not found
Operating system cannot be located on either drive A: or drive C:. Enter Setup and
see if fi xed disk and drive A: are properly identifi ed.
Parity Check 1 nnnn
Parity error found in the system bus. BIOS attempts to locate the address and display
it on the screen. If it cannot locate the address, it displays ????. Parity is a method
for checking errors in binary data. A parity error indicates that some data has been
corrupted.
Page 78
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
Parity Check 2 nnnn
Parity error found in the I/O bus. BIOS attempts to locate the address and display it
on the screen. If it cannot locate the address, it displays ????.
Press <F1> to resume, <F2> to Setup, <F3> for previous
Displayed after any recoverable error message. Press <F1> to start the boot process
or <F2> to enter Setup and change the settings. Press <F3> to display the previous
screen (usually an initialization error of an Option ROM, i.e., an add-on card). Write
down and follow the information shown on the screen.
Press <F2> to enter Setup
Optional message displayed during POST. Can be turned off in Setup.
PS/2 Mouse:
PS/2 mouse identifi ed.
Run the I2O Confi guration Utility
One or more unclaimed block storage devices have the Confi guration Request bit set
in the LCT. Run an I2O Confi guration Utility (e.g. the SAC utility).
System BIOS shadowed
System BIOS copied to shadow RAM.
UMB upper limit segment address: nnnn
Displays the address nnnn of the upper limit of Upper Memory Blocks, indicating
released segments of the BIOS which can be reclaimed by a virtual memory man-
ager.
Video BIOS shadowed
Video BIOS successfully copied to shadow RAM.
A-6
Page 79
Appendix B: BIOS POST Codes
Appendix B
BIOS POST Codes
This section lists the POST (Power On Self Test) codes for the Phoenix BIOS. POST
codes are divided into two categories: recoverable and terminal.
Recoverable POST Errors
When a recoverable type of error occurs during POST, the BIOS will display an
POST code that describes the problem. BIOS may also issue one of the follow-
ing beep codes:
1 long and two short beeps - video confi guration error
1 continuous long beep - overheat (Overheat LED will be on)
1 long beep and 1 short pause - memory not detected
Terminal POST Errors
If a terminal type of error occurs, BIOS will shut down the system. Before doing so,
BIOS will write the error to port 80h, attempt to initialize video and write the error
in the top left corner of the screen.
The following is a list of codes that may be written to port 80h.
POST Code Description
02h Verify Real Mode
03h Disable Non-Maskable Interrupt (NMI)
04h Get CPU type
06h Initialize system hardware
07h Disable shadow and execute code from the ROM.
08h Initialize chipset with initial POST values
09h Set IN POST fl ag
0Ah Initialize CPU registers
0Bh Enable CPU cache
0Ch Initialize caches to initial POST values
0Eh Initialize I/O component
0Fh Initialize the local bus IDE
10h Initialize Power Management
11h Load alternate registers with initial POST values
12h Restore CPU control word during warm boot
13h Initialize PCI Bus Mastering devices
14h Initialize keyboard controller
16h 1-2-2-3 BIOS ROM checksum
17h Initialize cache before memory Auto size
B-1
Page 80
B-2
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
POST Code Description
18h 8254 timer initialization
1Ah 8237 DMA controller initialization
1Ch Reset Programmable Interrupt Controller
20h 1-3-1-1 Test DRAM refresh
22h 1-3-1-3 Test 8742 Keyboard Controller
24h Set ES segment register to 4 GB
28h Auto size DRAM
29h Initialize POST Memory Manager
2Ah Clear 512 kB base RAM
2Ch 1-3-4-1 RAM failure on address line xxxx*
2Eh 1-3-4-3 RAM failure on data bits xxxx* of low byte of
memory bus
2Fh Enable cache before system BIOS shadow
32h Test CPU bus-clock frequency
33h Initialize Phoenix Dispatch Manager
36h Warm start shut down
38h Shadow system BIOS ROM
3Ah Auto size cache
3Ch Advanced confi guration of chipset registers
3Dh Load alternate registers with CMOS values
41h Initialize extended memory for RomPilot
42h Initialize interrupt vectors
45h POST device initialization
46h 2-1-2-3 Check ROM copyright notice
47h Initialize I20 support
48h Check video confi guration against CMOS
49h Initialize PCI bus and devices
4Ah Initialize all video adapters in system
4Bh QuietBoot start (optional)
4Ch Shadow video BIOS ROM
4Eh Display BIOS copyright notice
4Fh Initialize MultiBoot
50h Display CPU type and speed
51h Initialize EISA board
52h Test keyboard
54h Set key click if enabled
55h Enable USB devices
58h 2-2-3-1 Test for unexpected interrupts
59h Initialize POST display service
5Ah Display prompt “Press F2 to enter SETUP”
5Bh Disable CPU cache
Page 81
Appendix B: BIOS POST Codes
B-3
POST Code Description
5Ch Test RAM between 512 and 640 kB
60h Test extended memory
62h Test extended memory address lines
64h Jump to UserPatch1
66h Confi gure advanced cache registers
67h Initialize Multi Processor APIC
68h Enable external and CPU caches
69h Setup System Management Mode (SMM) area
6Ah Display external L2 cache size
6Bh Load custom defaults (optional)
6Ch Display shadow-area message
6Eh Display possible high address for UMB recovery
70h Display error messages
72h Check for confi guration errors
76h Check for keyboard errors
7Ch Set up hardware interrupt vectors
7Dh Initialize Intelligent System Monitoring
7Eh Initialize coprocessor if present
80h Disable onboard Super I/O ports and IRQs
81h Late POST device initialization
82h Detect and install external RS232 ports
83h Confi gure non-MCD IDE controllers
84h Detect and install external parallel ports
85h Initialize PC-compatible PnP ISA devices
86h Re-initialize onboard I/O ports.
87h Confi gure Motherboard Confi gurable Devices
(optional)
88h Initialize BIOS Data Area
89h Enable Non-Maskable Interrupts (NMIs)
8Ah Initialize Extended BIOS Data Area
8Bh Test and initialize PS/2 mouse
8Ch Initialize fl oppy controller
8Fh Determine number of ATA drives (optional)
90h Initialize hard-disk controllers
91h Initialize local-bus hard-disk controllers
92h Jump to UserPatch2
93h Build MPTABLE for multi-processor boards
95h Install CD ROM for boot
96h Clear huge ES segment register
97h Fix up Multi Processor table
98h 1-2 Search for option ROMs. One long, two short
beeps on checksum failure
Page 82
B-4
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
POST Code Description
99h Check for SMART Drive (optional)
9Ah Shadow option ROMs
9Ch Set up Power Management
9Dh Initialize security engine (optional)
9Eh Enable hardware interrupts
9Fh Determine number of ATA and SCSI drives
A0h Set time of day
A2h Check key lock
A4h Initialize typematic rate
A8h Erase F2 prompt
AAh Scan for F2 key stroke
ACh Enter SETUP
AEh Clear Boot fl ag
B0h Check for errors
B1h Inform RomPilot about the end of POST.
B2h POST done - prepare to boot operating system
B4h 1 One short beep before boot
B5h Terminate QuietBoot (optional)
B6h Check password (optional)
B7h Initialize ACPI BIOS
B9h Prepare Boot
BAh Initialize SMBIOS
BBh Initialize PnP Option ROMs
BCh Clear parity checkers
BDh Display MultiBoot menu
BEh Clear screen (optional)
BFh Check virus and backup reminders
C0h Try to boot with INT 19
C1h Initialize POST Error Manager (PEM)
C2h Initialize error logging
C3h Initialize error display function
C4h Initialize system error handler
C5h PnPnd dual CMOS (optional)
C6h Initialize note dock (optional)
C7h Initialize note dock late
C8h Force check (optional)
C9h Extended checksum (optional)
CAh Redirect Int 15h to enable remote keyboard
CBh Redirect Int 13h to Memory Technologies
Devices such as ROM, RAM, PCMCIA, and
serial disk
CCh Redirect Int 10h to enable remote serial video
Page 83
Appendix B: BIOS POST Codes
B-5
POST Code Description
CDh Re-map I/O and memory for PCMCIA
CEh Initialize digitizer and display message
D2h Unknown interrupt
The following are for boot block in Flash ROM
POST Code Description
E0h Initialize the chipset
E1h Initialize the bridge
E2h Initialize the CPU
E3h Initialize system timer
E4h Initialize system I/O
E5h Check force recovery boot
E6h Checksum BIOS ROM
E7h Go to BIOS
E8h Set Huge Segment
E9h Initialize Multi Processor
EAh Initialize OEM special code
EBh Initialize PIC and DMA
ECh Initialize Memory type
EDh Initialize Memory size
EEh Shadow Boot Block
EFh System memory test
F0h Initialize interrupt vectors
F1h Initialize Run Time Clock
F2h Initialize video
F3h Initialize System Management Manager
F4h Output one beep
F5h Clear Huge Segment
F6h Boot to Mini DOS
F7h Boot to Full DOS
* If the BIOS detects errors on 2C, 2E, or 30 (base 512K RAM error), it displays an
additional word-bitmap (xxxx) indicating the address line or bits that have failed. For
example, “2C 0002” means address line 1 (bit one set) has failed. “2E 1020" means
data bits 12 and 5 (bits 12 and 5 set) have failed in the lower 16 bits. The BIOS also
sends the bitmap to the port-80 LED display. It fi rst displays the checkpoint code,
followed by a delay, the high-order byte, another delay, and then the loworder byte of
the error. It repeats this sequence continuously.
Page 84
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
Notes
B-6
Page 85
Appendix C: Software Installation
Appendix C
Software Installation
After all the hardware has been installed, you must fi rst confi gure Intel's ICH7R
SATA RAID* before you install the Windows Operating System and other software
drivers.
Important Notes to the User:
Note 1: If you do not wish to confi gure onboard SATA RAID functions, please go
directly to Section C-3 for Operating System & Other Software Installation.
Note 2: This chapter describes RAID Confi guration Instructions for the Intel ICH
RAID Controller designed for the Windows OS.
Note 3: GLAN2 is available on the PDSML-LN2+/PDSML-E+ only.
C-1 Introduction to Serial ATA and Parallel ATA
To confi gure the SATA RAID functions, you must fi rst use the Intel ICH7R SATA
RAID Utility program to confi gure the RAID Level that you desire before installing
the Windows XP/2000/2003 operating system and other software drivers. (The
necessary drivers are all included on the Supermicro CD that came packaged with
your motherboard.) Note that the current version of the ICH7R SATA RAID Utility
can only support Windows XP/2000/2003 Operating Systems.
Serial ATA (SATA)
Serial ATA (SATA) is a physical storage interface that uses a single cable with a
minimum of four wires to create a point-to-point connection between devices. It is
a serial link, which supports transfer rates up to 3Gbps. Because the serial cables
used in SATA are thinner than the traditional cables used in Parallel ATA (PATA),
SATA systems have better airfl ow and can be installed in smaller chassis than
Parallel ATA. In addition, the cables used in PATA are limited to a length of 40cm,
while Serial ATA cables can be up to one meter in length. Overall, SATA provides
better functionality than PATA.
Introduction to Intel ICH7R Serial RAID
Located in the South Bridge of the 3000 chipset, the I/O Controller Hub (ICH7R)
provides the I/O subsystem with access to the rest of the system. It supports a 2-
channel UltraATA/100 Bus Master IDE controller (PATA) and four Serial ATA (SATA)
ports. The ICH7R supports the following PATA and SATA device confi gurations:
Legacy mode and Native mode.
C-1
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C-2
PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
RAID Confi gurations
The following types of RAID confi gurations are supported:
RAID 0 (Data Striping): this writes data in parallel, interleaved ("striped") sections
of two hard drives. Data transfer rate is doubled over using a single disk.
RAID1 (Data Mirroring): an identical data image from one drive is copied to another
drive. The second drive must be the same size or larger than the fi rst drive.
RAID 10 (Striping & Mirroring): RAID 0 and 1 schemes are combined (without parity
information) to get the benefi ts of both.
RAID 5: both data and parity information are striped and mirrored across three or
more hard drives.
Intel Matrix Storage Technology
The Intel Matrix Storage Technology, supported by the ICH7R, allows the user to
create RAID 0 and RAID1 set by using only two identical hard disk drives. The
Intel Matrix Storage Technology creates two partitions on each hard disk drive and
generate a virtual RAID0 and RAID1 sets. It also allows you the change the HDD
partition size without any data.
Confi guring BIOS settings for SATA RAID Functions (Native Mode)
1. Press the <Del> key during system bootup to enter the BIOS Setup Utility.
Note: If it is the fi rst time powering on the system, we recommend you load the
Optimized Default Settings. If you have already done so, please skip to Step 3.
2. Use the arrow keys to select the "Exit" Settings. Once in the "Exit" settings,
Scroll down to select "Load Optimized Default Settings" and press the <Enter>
key. Select "OK" to confi rm the selection. Press the <Enter> key to load the default
settings for the BIOS.
3. Use the arrow keys to select the "Main" section in BIOS.
4. Scroll down to "SATA Control Mode" and press the <Enter> key to select "En-
hanced"
5. Scroll down to "SATA RAID Enabled" and press <Enter>. Then, select "Enabled."
6. Scroll down to "Exit". Select "Save and Exit" from the "Exit" menu. Press the
<Enter> key to save the changes and exit the BIOS.
7. Once you've exited the BIOS Utility, the system will re-boot.
8. During the system boot-up, press the <Ctrl> and <I> keys simultaneously to run
the Intel RAID Confi guration Utility when prompted by the following message: Press
<Ctrl> <I> for Intel RAID Confi guration Utility.
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Appendix C: Software Installation
C-3
Using the Intel ICH7R SATA RAID Utility Program
1. Creating, Deleting and Resetting RAID Volumes:
a. After the system exits from the BIOS Setup Utility, the system will automatically
reboot. The following screen appears after Power-On Self Test.
b. When you see the above screen, press the <Ctrl> and the <I> keys simultane-
ously to have the main menu of the SATA RAID Utility appear:
Note: All graphics and screen shots shown in the manual are for reference only. The
screen shots shown in the manual do not imply Supernicro's endorsement or non-en-
dorsement on any 3rd party's product. Your screens may or many not look exactly the
same as the graphics shown in this manual.
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PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
b. Specify a name for the RAID 0 set and press the <Tab> key or the <Enter> key
to go to the next fi eld. (You can use the <Esc> key to select the previous menu.)
c. When RAID Level item is highlighted, press the <Up Arrow>, <Down Arrow> keys
to select RAID 0 (Stripe) and hit <Enter>.
d. When the Disks item is highlighted, press <Enter> to select the HDD to confi gure
as RAID. The following pop-up screen (*See the note on Page C-3) displays:
e. Use the <Up Arrow>, <Down Arrow> keys to highlight a drive and press <Space>
to select it. A triangle appears to confi rm the selection of the drive.
f. Use the <Up Arrow>, <Down Arrow> keys to select the stripe size, ranging from
4 KB to 128 KB for the RAID 0 array, and hit <Enter>. Note: For a server, please
use a lower stripe size, and for a multimedia system, use a higher stripe size. The
default stripe size is 128 KB.
g. Press <Enter> when the Create Volume item is highlighted. A warning message
displays.
h. When asked "Are you sure you want to create this volume (Y/N), press "Y" to
create the RAID volume, or type "N" to go back to the Create Volume menu.
Creating a RAID 0 Volume:
a. Select "Create RAID Volume" from the main menu and press the <Enter> key.
The following screen will appear:
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Appendix C: Software Installation
C-5
Creating a RAID 1 Volume:
a. Select "Create RAID Volume" from the main menu and press the <Enter> key.
The following screen will appear:
b. Specify a name for the RAID 1 set and press the <Tab> key or the <Enter> key
to go to the next fi eld. (You can use the <Esc> key to select the previous menu.)
c. When RAID Level item is highlighted, press the <Up Arrow>, <Down Arrow> keys
to select RAID 1 (Mirror) and hit <Enter>.
d. When the Capacity item is highlighted, enter your RAID volume capacity and hit
<Enter>. The default setting is the maximum capacity allowed.
e. Press <Enter> when the Create Volume item is highlighted. A warning message
displays.
f. When asked "Are you sure you want to create this volume (Y/N), press "Y" to
create the RAID volume, or type "N" to go back to the Create Volume menu.
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Creating a RAID 10 (RAID 1+ RAID 0):
a. Select "Create RAID Volume" from the main menu and press the <Enter> key.
The following screen will appear:
b. Specify a name for the RAID 10 set and press <Enter>.
c. When RAID Level item is highlighted, use the <Up Arrow>, <Down Arrow> keys
to select RAID 10 (RAID1 + RAID0) and hit <Enter>.
d. When the Stripe Size is highlighted, use the <Up Arrow>, <Down Arrow> keys to
select the stripe size from 4 KB to 128 KB for your RAID 10 and hit <Enter>. The
default setting is 6 4KB. Note: For a server, please use a lower stripe size, and for
a multimedia system, use a higher stripe size.)
e. When the RAID Volume Capacity item is highlighted, enter your RAID volume
capacity and hit <Enter>. The default setting is the maximum capacity allowed.
f. Press <Enter> when the Create Volume item is highlighted. A warning message
displays.
g. When asked "Are you sure you want to create this volume (Y/N), press "Y" to
create the RAID volume, or type "N" to go back to the Create Volume menu.
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Appendix C: Software Installation
C-7
Creating a RAID 5 Set (Parity):
a. Select "Create RAID Volume" from the main menu and press the <Enter> key.
The following screen will appear:
b. Specify a name for the RAID 5 set and press <Enter>.
c. When the Raid Level is highlighted, use the <Up Arrow>, <Down Arrow> keys to
select RAID 5 (Parity) and hit <Enter>.
d. When the Disk item is highlighted, press <Enter> to select the HDD to confi gure
as RAID. The following pop-up screen (*See the note on Page C-3) displays:
e. Use the <Up Arrow>, <Down Arrow> keys to highlight a drive and press <Space>
to select it. A triangle appears to confi rm the selection of the drive.
f. Use the <Up Arrow>, <Down Arrow> keys to select the stripe size, ranging from
4 KB to 128 KB for the RAID 5 array, and hit <Enter>. Note: For a server, please
use a lower stripe size, and for a multimedia system, use a higher stripe size. The
default stripe size is 128 KB.)
g. Enter your desired RAID volume capacity and press <Enter> when the capacity
item is highlighted. The default setting is the maximum capacity allowed.
h Press Enter when the Create Volume item is highlighted. A warning message
displays.
i. When asked "Are you sure you want to create this volume (Y/N), press "Y" to
create the RAID volume, or type "N" to go back to the Create Volume menu.
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PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
Deleting RAID Volume:
(Warning: Be sure to back up your data before deleting a RAID set. You
will lose all data on the disk drives when deleting a RAID set.)
a. From the main menu, select item2-Delete RAID Volume, and press <Enter>.
b. Use the <Up Arrow>, <Down Arrow> keys to select the RAID set you want to
delete and press <Del>. A Warning message displays.
c. When asked "Are you sure you want to delete this volume (Y/N), press "Y" to
delete the RAID volume, or type "N" to go back to the Delete Volume menu.
Page 93
Appendix C: Software Installation
C-9
Resetting to Non-RAID and Resetting a RAID HDD
a. From the main menu, select item3-Reset Disks to Non- RAID, and press <Enter>.
The following screen will appear:
b. Use the <Up Arrow>, <Down Arrow> keys to highlight the RAID set drive to reset
and press <Space> to select.
c. Press <Enter> to reset the RAID set drive. A Warning message displays.
d. Press "Y" to reset the drive, or type "N" to go back to the main menu.
Exiting the Intel Matrix Storage Manager Utility:
a. From the main menu, select item4-Exit, and press <Enter>. A warning message
will appear.
b. Press "Y" to reset the drive, or type "N" to go back to the main menu.
(Warning: Be cautious when you reset a RAID volume HDD to non-
RAID or Resetting a RAID HDD. Resetting a RAID volume HDD or
Resetting a RAID HDD will reformat the HDD and delete the internal
RAID structure on the drive.)
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PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
C-2 Installing the Windows XP/2000/2003 for systems
with RAID Functions
Installing a New Operating System-Windows XP/2000/2003 OS
a. Insert the Microsoft Windows XP/2000/2003 Setup CD in the CD Driver, and the
system will start booting up from CD.
b. Press the <F6> key when the message-" Press F6 if you need to install a third
party SCSI or RAID driver" displays.
c. When the Windows XP/2000/2003 Setup screen appears, press "S" to specify
additional device(s).
d. Insert the driver diskette-"Intel AA RAID XP/2000/2003 Driver for ICH7R into Drive
A: and press the <Enter> key.
e. Choose the Intel(R)82801GR/GH SATA RAID Controller from the list indicated in
the XP/2000/2003 Setup Screen, and press the <Enter> key.
f. Press the <Enter> key to continue the installation process. (If you need to specify
any additional devices to be installed, do it at this time.) Once all devices are speci-
fi ed, press the <Enter> key to continue with the installation.
g. From the Windows XP/2000/2003 Setup screen, press the <Enter> key. The
XP/2000/2003 Setup will automatically load all device fi les and then, continue the
Windows XP/2000/2003 installation.
h. After the Windows XP/2000/2003 Installation is completed, the system will au-
tomatically reboot.
i. Insert Supermicro CD that came with the package into the CD Drive during system
reboot, and the following screen will appear:
Note: the current version of the ICH7R SATA RAID Utility can only support the
Windows XP/2000/2003 Operating System.
Page 95
Appendix C: Software Installation
C-11
C-3 Installing the Operating System and other Software
Programs
After all the hardware has been installed, you must fi rst install the operating
system, and then, other software drivers. The necessary drivers are all included
on the Supermicro CDs that came packaged with your motherboard. Note: for the
Windows 2003 OS, please refer to Page C-10.
Driver/Tool Installation Display Screen
Note: Click the icons showing a hand writing on the paper to view the readme fi les
for each item. Click the computer icons to the right of these items to install each
item (from top to the bottom) one at a time. After installing each item, you must
re-boot the system before moving on to the next item on the list. The bottom
icon with a CD on it allows you to view the entire contents of the CD.
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PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
Supero Doctor III
The Supero Doctor III program is a Web-base management tool that supports
remote management capability. It includes Remote and Local Management tools.
The local management is called the SD III Client. The Supero Doctor III program
included on the CDROM that came with your motherboard allows you to monitor
the environment and operations of your system. Supero Doctor III displays crucial
system information such as CPU temperature, system voltages and fan status. See
the Figure below for a display of the Supero Doctor III interface.
Note 1: The default user name and password are ADMIN.
Note 2: In the Windows OS environment, the Supero Doctor III settings take pre-
cedence over the BIOS settings. When fi rst installed, Supero Doctor III adopts the
temperature threshold settings previously set in the BIOS. Any subsequent changes
to these thresholds must be made within Supero Doctor, since the SD III settings
override the BIOS settings. For the Windows OS to adopt the BIOS temperature
threshold settings, please change the SDIII settings to be the same as those set
in the BIOS.
Supero Doctor III Interface Display Screen-I (Health Information)
Page 97
Appendix C: Software Installation
C-13
Note: SD III Software Revision 1.0 can be downloaded from our Web Site at: ftp://
ftp.supermicro.com/utility/Supero_Doctor_III/. You can also download SDIII User's
Guide at: http://www.supermicro.com/PRODUCT/Manuals/SDIII/UserGuide.pdf. For
Linux, we will still recommend Supero Doctor II.
Supero Doctor III Interface Display Screen-II (Remote Control)
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PDSML-LN1+/PDSML-LN2+/PDSML-E+ User's Manual
Notes
Page 99
(Disclaimer)
The products sold by Supermicro are not intended for and will not be used in life support systems, medical equipment, nuclear facilities or systems, aircraft, aircraft devices,
aircraft/emergency communication devices or other critical systems whose failure to perform be reasonably expected to result in signifi cant injury or loss of life or catastrophic
property damage. Accordingly, Supermicro disclaims any and all liability, and should buyer use or sell such products for use in such ultra-hazardous applications, it does so
entirely at its own risk. Furthermore, buyer agrees to fully indemnify, defend and hold Supermicro harmless for and against any and all claims, demands, actions, litigation, and
proceedings of any kind arising out of or related to such ultra-hazardous use or sale.
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