PCRmax Aeromonas hydrophila Instruction Manual

aerolysin (aerA)
Bacteria Hemorrhagic Septicemia
PCRmax Ltd qPCR test
150 tests
For general laboratory and research use only
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Aeromonas hydrophila is a heterotrophic, gram-negative bacterium of the Aeromonadaceae family. This bacterium has a rod shape with rounded ends reaching 1
-3μm in length. Polar flagella allow motility. 3 enterotoxins encoded by the 5Mbp genome are thought to be responsible for making this bacterium pathogenic. These entereotoxins are namely: cytotoxic (act); heat-labile cytotonic (alt) and heat-stable cytotonic (ast) of which the former is thought to contribute most to toxicity. A. hydrophila can be considered as an opportunistic pathogen which is linked to infections in fish and amphibians as well as humans, but may not be the cause.
Infection most usually occurs when an organism is dealing with environmental change. This could be a change in temperature or when infected with a different bacterium. In fish, the bacteria mainly infect the kidneys and liver resulting in disease that is thought to be the result of stress. In amphibians, the infection can cause internal heamorrhaging. Infection in humans can be caused by ingestion of infected food such as fish or meat. Once ingested the bacterium progresses to an organ via the bloodstream. Alternatively the bacterium can infect open wounds. The bacteria have pili which they utilise in attachment to host organism and invasion of the cells or organs. Colonisation occurs by asexual reproduction. Upon cell invasion, the enterotoxins are activated causing cell damage. Transmission in fish occurs when infected fish are moved into new fisheries without sanitation. The bacteria are largely antibiotic resistant, can survive refrigeration and are also able to grow at temperatures in a wide range up to 37°C. However, a sodium/calcium hypochlorite solution can kill this bacterium.
Infection in fish may cause diseases including tail and fin rot, heamorrahagic septicemia and ulcer disease. In amphibians this bacterium is linked to a disease called red leg which is a result of internal heamorrhaging. Infection in humans can lead to a number of diseases including septicemia, meningitis, pneumonia and gastroenteritis. The bacteria can also infect open wounds causing cellulitis, myonecrosis and ecthyma gangrenosum. The latter two diseases occur more commonly in the immunocompromised, although infections do also occur in immunocompetent people.
Introduction to Bacteria Hemorrhagic Septicemia
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The primers have 100% homology with >95% of sequenced Aeromonas hydrophila isolates in the NCBI database. Due to the high sequence homology, the primers also have a high level of homology to other closely related Aeromonas sp. The primers therefore may also detect A. salmonicida, A. caviae and A. sobria.
The PCR Max qPCR Kit for Bacteria Hemorrhagic Septicemia (A.hydrophila) genomes is designed for the in vitro quantification of A.hydrophila genomes. The kit is designed to have the broadest detection profile possible whilst remaining specific to the A.hydrophila genome.
The primers and probe sequences in this kit have 100% homology with a broad range of A.hydrophila sequences based on a comprehensive bioinformatics analysis.
If you require further information, or have a specific question about the detection profile of this kit then please send an e.mail to help@pcrmax.com and our bioinformatics team will answer your question.
Specificity
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Kit Contents
• A.hydrophila specific primer/probe mix (150 reactions BROWN)
FAM labelled
• A.hydrophila positive control template (for Standard curve RED)
• Internal extraction control primer/probe mix (150 reactions BROWN)
VIC labelled as standard
• Internal extraction control DNA (150 reactions BLUE)
• Endogenous control primer/probe mix (150 reactions BROWN)
FAM labelled
• RNAse/DNAse free water (WHITE)
for resuspension of primer/probe mixes and internal extraction control DNA
• Template preparation buffer (YELLOW)
for resuspension of positive control template and standard curve preparation
Reagents and equipment to be supplied by the user
Real-Time PCR Instrument
DNA extraction kit
This kit designed to work well with all processes that yield high quality DNA with minimal PCR inhibitors.
Lyophilised 2x qPCR Mastermix
This kit is designed to be compatible with all commercially available Mastermixes that run with standard cycling conditions.
Pipettors and Tips
Vortex and centrifuge
Thin walled 1.5 ml PCR reaction tubes
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