3.5" ETX Motherboard with AMD Geode LX 800 CPU
VGA, LVDS, TTL, Dual LAN, USB 2.0, Audio, PC/104
Fanless and Onboard Memory
User Manual
Rev. 1.00 – 7 January, 2009
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WAFER-LX3 3.5" Motherboard
Revision
Date Version Changes
7 January, 2009 2.00 Wide temperature range changed to –40ºC~85ºC
BIOS changed to AMI
Super I/O changed to SMSC SCH3114
30 August, 2007 1.00 Initial release
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WAFER-LX3 3.5" Motherboard
COPYRIGHT NOTICE
The information in this document is subject to change without prior notice in order to
improve reliability, design and function and does not represent a commitment on the part
of the manufacturer.
In no event will the manufacturer be liable for direct, indirect, special, incidental, or
consequential damages arising out of the use or inability to use the product or
documentation, even if advised of the possibility of such damages.
This document contains proprietary information protected by copyright. All rights are
Copyright
reserved. No part of this manual may be reproduced by any mechanical, electronic, or
other means in any form without prior written permission of the manufacturer.
TRADEMARKS
All registered trademarks and product names mentioned herein are used for identification
purposes only and may be trademarks and/or registered trademarks of their respective
owners.
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WAFER-LX3 3.5" Motherboard
Packing List
NOTE:
If any of the components listed in the checklist below are missing,
please do not proceed with the installation. Contact the IEI reseller or
vendor you purchased the WAFER-LX3 from or contact an IEI sales
representative directly. To contact an IEI sales representative, please
send an email to
The items listed below should all be included in the WAFER-LX3 package.
1 x WAFER-LX3
1 x IDE 44p/44p flat cable
1 x RS-232/422/485 cable
1 x Keyboard and mouse Y-cable
1 x Audio cable
1 x USB cable
1 x Mini jumper pack
1 x Utility CD
1 x QIG (quick installation guide)
BIOS Menu 1: Main.......................................................................................................................85
BIOS Menu 2: Advanced..............................................................................................................87
BIOS Menu 3: CPU Configuration...............................................................................................88
BIOS Menu 4: IDE Configuration.................................................................................................89
BIOS Menu 5: IDE Master and IDE Slave Configuration...........................................................91
BIOS Menu 6: IDE Master and IDE Slave Configuration...........................................................96
BIOS Menu 7: Super IO Configuration........................................................................................97
BIOS Menu 8: Hardware Health Configuration....................................................................... 100
BIOS Menu 9: Remote Access Configuration......................................................................... 104
BIOS Menu 10: USB Configuration.......................................................................................... 108
BIOS Menu 11: IT8888 Configuration ...................................................................................... 109
BIOS Menu 12: ISA Decode I/O Spaces................................................................................... 114
BIOS Menu 13: ISA Decode Memory Spaces.......................................................................... 116
BIOS Menu 14: Power Configuration....................................................................................... 118
BIOS Menu 15: PCI/PnP Configuration.................................................................................... 119
BIOS Menu 16: Boot.................................................................................................................. 121
BIOS Menu 17: Boot Settings Configuration.......................................................................... 122
BIOS Menu 18: Boot Device Priority Settings ........................................................................ 124
BIOS Menu 19: Hard Disk Drives ............................................................................................. 125
BIOS Menu 20: CD/DVD Drives ................................................................................................ 126
BIOS Menu 21: Removable Drives........................................................................................... 127
BIOS Menu 22: Security............................................................................................................ 128
BIOS Menu 23: Chipset............................................................................................................. 129
BIOS Menu 24: Northbridge Chipset Configuration............................................................... 130
BIOS Menu 25: Exit.................................................................................................................... 132
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WAFER-LX3 3.5" Motherboard
Chapter
1
1 Introduction
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1.1 Introduction
Figure 1-1: WAFER-LX3
WAFER-LX3 3.5" Motherboard
The WAFER-LX3 3.5” motherboard is an AMD Geode™ LX 800 processor platform that
comes in both commercial and industrial grade models. Industrial grade models are able
to operate in extreme environmental conditions and in operational environments with wide
ranging ambient temperatures.
Support for VGA, LVDS and TTL displays provides diversified display functionaliti es. Each
WAFER-LX3 has either 256 MB or 512 MB DDR memory preinstalled on the system. Two
10/100 Mb/s Intel® 82551ER Ethernet controllers ensure secure network connecti vity.
A compatible PC/104 ISA expansion card is easily connected to the system through an
integrated PC/104 slot. Four USB 2.0 connectors provide additional expansion options to
the system ensuring a variety of USB 2.0 devices can be connected to the WAFER-LX3.
1.2 Models
The WAFER-LX3 models are listed below.
WAFER-LX3-800-256 MB – 256 MB memory, 0ºC~60ºC temp. range
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WAFER-LX3-800 W -25 6 MB – 256 MB memory, –40ºC~85ºC temp. range
WAFER-LX3-800-512 MB – 512 MB memory, 0ºC~60ºC temp. range
WAFER-LX3-800 W -51 2 MB – 512 MB memory, –40ºC~85ºC temp. range
The two models are distinguished by the preinstalled heat sinks as shown in
Figure 1-2.
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WAFER-LX3 3.5" Motherboard
Figure 1-2: WAFER-LX3-800 and WAFER-LX3-800 W
1.3 Features
Some of the WAFER-LX3 features are listed below.
3.5” form factor
Integrated 500 MHz AMD Geode™ LX 800 CPU
Onboard 256 MB or 512 MB DDR memory
Multiple display options including
Operates in a wide range of ambient temperatures:
1.4 Overview
The WAFER-LX3 has a wide variety of peripheral interface connectors. Figure 1-3 is a
labeled photo of the peripheral interface connectors on the front side of the WAFER-LX3.
o VGA
o 24-bit TTL
o 18-bit LVDS display interface
o WAFER-LX3-800: 0ºC~60ºC
o WAFER-LX3-800 W: -40ºC~85ºC
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WAFER-LX3 3.5" Motherboard
Figure 1-3: WAFER-LX3 Overview [Front View]
Figure 1-4 is a labeled photo of the peripheral interface connectors on the solder side of
the WAFER-LX3.
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WAFER-LX3 3.5" Motherboard
Figure 1-4: WAFER-LX3 Overview [Solder Side]
1.5 Peripheral Connectors and Jumpers
The WAFER-LX3 has the following connectors on-board:
1 x ATX power connector
1 x Audio connector
1 x Backlight inverter connector
1 x Battery connector
1 x CF Card socket (solder side)
1 x Fan connectors
1 x FDD connector (optional)
1 x Front panel connector
1 x General purpose input/output (GPIO) connector
1 x IDE connector
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1 x Keyboard/mouse connector
1 x LVDS LCD connector
1 x Parallel port (LPT) connector
1 x PC/104 slot
1 x Power button connector
1 x Power input (–5 V/-12 V) connector
2 x RS-232 serial port connector
1 x RS-422/485 serial port connector
1 x Suspend power input connector
1 x System reset button connector
1 x TTL LCD connector
1 x USB 2.0 connector
The WAFER-LX3 has the following external peripheral interface connectors on the board
rear panel.
WAFER-LX3 3.5" Motherboard
2 x RJ-45 Fast Ethernet connectors
1 x RS-232 serial port connector
2 x USB 2.0 connectors
1 x VGA connector
The WAFER-LX3 has the following on-board jumpers:
AT/ATX power mode select jumper
CF Card mode select jumper
COM1 and COM2 serial RI port and voltage selection jumper
LCD panel shift clock setting jumper
LCD panel voltage select jumper
RS-422/485 mode select jumper
1.6 Technical Specifications
WAFER-LX3 technical specifications are listed in Table 1-1. See Chapter 2 for details.
Page 6
Specification WAFER-LX3
Form Factor
3.5”
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WAFER-LX3 3.5" Motherboard
Specification WAFER-LX3
System CPU
CPU Clock Speed
System Chipset
Memory
Display
BIOS
Audio
LAN
COM
USB2.0
AMD Geode™ LX 800
500 MHz
AMD Geode™ CS5536 companion device
256 MB or 512 MB DDR
Analog VGA display through external DB-15 connector
24-bit TTL through 40-pin crimp connector
18-bit single channel LVDS through 20-pin crimp connector
AMI BIOS label
AC’97 RealTek ALC203 codec
Dual Intel® 82551 10/100 Mb/s Ethernet controllers
Three RS-232 serial port (one external)
One RS-422/485 serial port
Four USB 2.0 devices supported (two by pin header, two
external)
Hard Disk Drives
Parallel Port
Expansion
Digital I/0
Super I/O
SSD
Watchdog Timer
Power Supply
Power Consumption
Ambient Temperature
Humidity
One 44-pin IDE connector
One 26-pin LPT connector
One PC/104 slot
One 8-bit digital I/0, 4-bit input/4-bit output
SMSC SCH3114
CF Card Type II
Software programmable supports 1 sec. ~ 255 sec. system
reset.
AT and ATX support
5 V @ 1.34 A (AMD Geode™ LX 800 CPU with 256 MB DDR)
WAFER-LX3-800: 0°C~60°C
Figure 2-4 shows the data flow between the two on-board chipsets and other components
installed on the motherboard and described in the following sections of this chapter.
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WAFER-LX3 3.5" Motherboard
Figure 2-4: Data Flow Block Diagram
2.3 AMD® Geode™ LX 800 500 MHz CPU
The 500 MHz AMD® Geode™ LX 800 processor is shown below.
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WAFER-LX3 3.5" Motherboard
Figure 2-5: AMD Geode™ LX 800 Processor
The specifications for the 500 MHz AMD
x86/x87-compatible core
Processor frequency up to 500 MHz
64K I/64K D L1 cache and 128K L2 cache
Split I/D cache/TLB (Translation Look-Aside Buffer)
Integrated FPU that supports the Intel MMX® and AMD 3DNow!™
The AMD® Geode™ LX 800 DDR memory bus on the WAFER-LX3 is connected to the
DDR memory, 256 MB and 512 MB DDR options are available.
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2.3.2 Display Support
The AMD® Geode™ LX 800 supports both CRT and TFT in a dual display mode and has
the following specifications.
Supported Standards
o High Definition (HD)
o Standard Definition (SD)
Supported Resolution
o 1920x1440 in CRT mode
o 1600x1200 in TFT mode
VESA 1.1 and 2.0 VIP/VDA support
2.3.2.1 VGA
The VGA interface supports standard CRT output and has a maximum resolution of
WAFER-LX3 3.5" Motherboard
1920x1440.
2.3.2.2 TTL
The TTL interface connects to a TTL monitor and supports up to 1600x1200 screen
resolution.
2.3.2.3 LVDS
The TTL interface connects to a TTL-to-LVDS transmitter which converts the TT L signal to
an LVDS signal and is connected to the LVDS connector on the board. The LVDS
connector supports up to 1600x1200 screen resolution.
2.3.3 Power Management
The power management for the 500 MHz AMD® Geode™ LX 800 is listed below:
1.8 W Typical (3.9 W TDP) @ 500 MHz
GeodeLink active hardware power management
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Hardware support for standard ACPI software power management
I/O companion SUSP#/SUSPA# power controls
Lower power I/O
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WAFER-LX3 3.5" Motherboard
Wakeup on SMI/INTR
2.3.4 GeodeLink™ Interface Unit
A proprietary GeodeLink™ interface connects the AMD Geode™ LX 800 to the AMD
Geode™ CS5536 system chipset.
2.4 AMD® Geode™ CS5536 System Chipset
The WAFER-LX3 series motherboards all have a preinstalled AMD® Geode™ CS5536
system chipset.
Figure 2-6: AMD Geode™ CS5536
The system chipset features are listed below.
82xx Legacy Devices
System Management Bus (SMB) Controller
8 Multi-Function General Purpose Timers (MFGPTs)
Power Management Controller
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ACPI v2.0 compliant
2.4.1 IDE Controller
The single 44-pin IDE connector supports up to two IDE device s incl uding h ard dri ves an d
DVD drives.
The CompactFlash® slot support both Type I and Type II CompactFlash® cards.
2.4.4 USB Controller
There are four USB ports on the WAFER-LX3, two internal ports through a single
pin-header and two external USB Type A ports. All USB ports are USB 2.0 compliant and
support legacy devices like keyboards and mice.
2.4.5 Real Time Clock
The system chipset has a 256-byte real-time clock (RTC) with CMOS RAM and battery
backup.
2.4.6 PCI Bus
The GeodeLink™ PCI Bridge (GLPCI) module provides a PCI interface for GeodeLink
Interface Unit-based designs. The PCI bus on the WAFER-LX3 is connected to the
following components:
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2 x Intel® 82551ER PCI Fast Ethernet controllers
1 x ITE IT8888G PCI to ISA bridge
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WAFER-LX3 3.5" Motherboard
2.4.6.1 Intel® 82551ER PCI Ethernet Controller
Two Intel® 82551ER PCI Ethernet 10/100BASE-T Ethernet LAN controllers are interfaced
to the AMD Geode™ CS5536 through the PCI bus. The Ethernet controllers are t hen b oth
connected to an RJ-45 connector that can be accessed externally.
2.4.6.2 PCI to ISA Bridge
An ITE IT8888G PCI-to-ISA chip connects the ISA bus PC/104 connector and the GPIO
connector to the GeodeLink™ PCI bridge. PC/104 compliant cards can be installed.
2.5 LPC Bus Components
The LPC bus is legacy bus for connecting certain components.
Figure 2-7: LPC Bus
The LPC bus is connected to components listed below:
BIOS chipset
Super I/O chipset
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2.5.1 BIOS Chipset
The BIOS chipset has a licensed copy of AMI BIOS installed. Some of the BIOS features
are listed below:
AMI BIOS
SMIBIOS (DMI) compliant
Console redirection function support
PXE (Pre-boot Execution Environment) support
USB booting support
2.5.2 SMSC SCH3114 Super I/O chipset
The SMSC SCH3114 Super I/O chipset is connected to the AMD Geode™ CS5536
companion device through the LPC bus. The super I/O connects to the following.
WAFER-LX3 3.5" Motherboard
2.5.2.1 Hardware Monitor Functions
2.5.2.2 UART Controller
2.5.2.3 Parallel Port
2.5.2.4 Floppy Disk Drive Controller (Optional)
2.5.2.5 Keyboard and Mouse Controller
2.5.2.6 GPIO Ports
2.5.2.7 Fan Speed and Fan Control
Details on these connections are shown is the subsections below.
2.5.2.1 Hardware Monitor Functions
The Super I/O Hardware Monitor monitors internal voltages, system temperature and the
cooling fan speed. All the monitored environmental parameters can be read from the BIOS
Hardware Health Configuration menu.
2.5.2.2 UART Controller
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There are two high-speed 16550 compatible UART controllers integrated onto the Super
I/O chipset. Both controllers have 16-byte send/receive FIFO. Some of the features of the
UART controllers are listed below:
o 5, 6, 7, or 8-bit characters
o Even, odd or no parity bit generation/detection
o 1, 1.5 or 2 stop bits generation
Internal diagnostic capabilities:
o Loop-back control for communications link fault isolation
o Break, parity, overrun, framing error stimulation
Programmable baud generator allows division of 1.8461 MHz and 24 MHz by
16
1 to (2
Maximum baud rate up to 921 kbps for 14.769 MHz and 1.5 Mb/s for 24 MHz
2.5.2.3 Parallel Port
The Super I/O parallel port (LPT) is compatible with the following LPT specifications.
– 1)
IBM parallel port compatible
PS/2 compatible bi-directional parallel port
Enhanced Parallel Port (EPP) mode supported. Compatible with IEEE 1284
specifications
Extended Parallel Port (EPP) mode supported. Compatible with IEEE 1284
specifications
Enhanced printer port back-drive current protection
The parallel port controller is connected to an external DB-26 LPT connector.
2.5.2.4 Floppy Disk Drive Controller (Optional)
The floppy disk drive controller supports a standard floppy drive up to 2.88 MB. The floppy
disk drive connector is an optional extra and not included on the standard board.
2.5.2.5 Keyboard and Mouse Controller
The keyboard and mouse controller connects to standard PS/2 keyboards and mice.
2.5.2.6 GPIO Ports
The Super I/O has 22 programmable GPIO ports.
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WAFER-LX3 3.5" Motherboard
2.5.2.7 Fan Speed and Fan Control
The super I/O can both monitor and control the fan speed. The super I/O is interfaced to
the fan on the backplane through the board-to-board connectors.
2.6 Environmental and Power Specifications
2.6.1 Operating Temperature and Temperature Control
The maximum and minimum operating temperatures for the WAFER-LX3 are listed below.
WAFER-LX3-800: Operates in temperatures of 0°C ~ +60°C
WAFER-LX3-800 W: Operates in temperatures of -40°C ~ +85°C
2.6.2 Power Consumption
Table 2-1 shows the power consumption parameters for the WAFER-LX3 running with an
AMD Geode™ LX 800 CPU with 256 MB of onboard memory.
Voltage Current
+5.0 V 1.34A
Table 2-1: Power Consumption
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WAFER-LX3 3.5" Motherboard
Chapter
3
3 Unpacking
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3.1 Anti-static Precautions
WARNING:
Failure to take ESD precautions during the installation of the
WAFER-LX3 may result in permanent damage to the WAFER-LX3 and
severe injury to the user.
Electrostatic discharge (ESD) can cause serious damage to electronic components,
including the WAFER-LX3. Dry climates are especially susceptible to ESD. It is therefore
critical that whenever the WAFER-LX3, or any other electrical component is handled, the
following anti-static precautions are strictly adhered to.
Wear an anti-static wristband: - Wearing a simple anti-static wristband can
WAFER-LX3 3.5" Motherboard
help to prevent ESD from damaging the board.
Self-grounding:- Before handling the board touch any grounded conducting
material. During the time the board is handled, frequently touch any
conducting materials that are connected to the ground.
Use an anti-static pad: When configuring the WA FER-LX3, place it on an
antic-static pad. This reduces the possibility of ESD damaging the
WAFER-LX3.
Only handle the edges of the PCB:-: When handling the PCB, hold the PCB
by the edges.
3.2 Unpacking
3.2.1 Unpacking Precautions
When the WAFER-LX3 is unpacked, please do the following:
Follow the anti-static precautions outlined in Section
Make sure the packing box is facing upwards so the WAFER-LX3 does not fall
3.1.
Page 22
out of the box.
Make sure all the components shown in Section
3.3 are present.
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WAFER-LX3 3.5" Motherboard
3.3 Unpacking Checklist
NOTE:
If some of the components listed in the checklist below are missing,
please do not proceed with the installation. Contact the IEI reseller or
vendor you purchased the WAFER-LX3 from or contact an IEI sales
representative directly. To contact an IEI sales representative, please
send an email to sales@iei.com.tw.
3.3.1 Package Contents
The WAFER-LX3 is shipped with the following components:
Quantity Item and Part Number Image
1 WAFER-LX3
1 IDE 44p/44p flat cable
(P/N: 32200-000009-RS)
1 RS-232/422/485 cable
(P/N:32200-026500-RS)
1 KB/MS PS/2 Y-cable
(P/N: 32000-023800-RS)
4 Dual USB cable (wo bracket)
(P/N: 32000-070300-RS)
1 Audio cable
(P/N: 32000-072100-RS)
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Quantity Item and Part Number Image
1 Mini jumper pack (2.0 mm)
(P/N:33100-000033-RS)
1 Quick Installation Guide
1 Utility CD
Table 3-1: Package List Contents
WAFER-LX3 3.5" Motherboard
3.4 Optional Items
Item Image
LPT cable (wo bracket)
(P/N: 32200-015100-RS)
Table 3-2: Package List Contents
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WAFER-LX3 3.5" Motherboard
4 Connector Pinouts
Chapter
4
Page 25
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4.1 Peripheral Interface Connectors
Section 0 shows peripheral interface connector locations. Section 0 lists all the
Keyboard and mouse connector 6-pin header CN17
LED connector 6-pin wafer CN5
LVDS connector 20-pin crimp CN29
Parallel port connector 26-pin header CN15
PC/104 slot 104-pin PC/104 slot CN10
PC/104 power input connector 3-pin wafer CN11
Reset button connector 2-pin wafer CN12
RS-232 serial port connector 10-pin header CN37
WAFER-LX3 3.5" Motherboard
RS-232 and RS-422/485 serial port
connector
TTL LCD connector 40-pin crimp CN28
USB port connector 8-pin header CN24
Table 4-1: Peripheral Interface Connectors
14-pin header CN20
4.1.3 External Interface Panel Connectors
Table 4-2 lists the rear panel connectors on the WAFER-LX3. Detailed descriptions of these connectors can be found in Section
Connector Type Label
Ethernet connector RJ-45 CN33
Ethernet connector RJ-45 CN34
RS-232 serial port connector Male DB-9 CN23
4.2.17 on page 46.
Page 28
Keyboard/mouse connector (optional) PS/2 CN18
USB connector USB port CN19
VGA connector Female DB-15 CN26
Table 4-2: Rear Panel Connectors
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WAFER-LX3 3.5" Motherboard
4.2 Internal Peripheral Connectors
Internal peripheral connectors are found on the motherboard and are only accessible
when the motherboard is outside of the chassis. T his se ction h as complet e d esc ription s of
all the internal, peripheral connectors on the WAFER-LX3.
4.2.1 ATX Power Button Connector
CN Label: CN13
CN Type:
CN Location:
CN Pinouts:
The ATX power button connector is connected to a power switch on the system chas sis to
enable users to turn the system on and off.
Figure 4-3: ATX Power Button Connector Location
2-pin wafer (1x2)
See Figure 4-3
See Table 4-3
PIN NO. DESCRIPTION
1 Power Switch
2 GND
Table 4-3: ATX Power Button Connector Pinouts
4.2.2 ATX Power Input Connector
CN Label: CN1
CN Type:
4-pin power connector (1x4)
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WAFER-LX3 3.5" Motherboard
CN Location:
CN Pinouts:
The 4-pin ATX power input connector is connected to an ATX or AT power supply, which
provides power to the system. If an ATX power supply is used, the ATX power supply
enable connector (see below) and the ATX power button connector should both be
connected. The AT/ATX mode select jumper should also be configured in ATX mode (see
Chapter 5)
See Figure 4-4
See Table 4-4
Figure 4-4: Main Power Input Connector Location
PIN NO. DESCRIPTION
1 +12 V
2 GND
3 GND
4 +5 V
Table 4-4: Main Power Input Connector Pinouts
4.2.3 ATX Power Supply Enable Connector
CN Label: CN2
CN Type:
CN Location:
3-pin wafer (1x3)
See Figure 4-5
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WAFER-LX3 3.5" Motherboard
CN Pinouts:
The ATX power supply enable connector enables the WAFER-LX3 to be connected to an
ATX power supply. In default mode, the WAFER-LX3 can only us an AT power supply. To
enable an ATX power supply the AT Power Select jumper must also be configured. Please
refer to Chapter 5 for more details.
See Table 4-5
Figure 4-5: ATX Power Supply Enable Connector Location
PIN NO. DESCRIPTION
1 +5 VSB
2 NC
3 PSON#
Table 4-5: ATX Power Supply Enable Connector Pinouts
4.2.4 Audio Connector (10-pin)
CN Label: CN8
CN Type:
CN Location:
CN Pinouts:
10-pin box-header
See Figure 4-6
See Table 4-6
The 10-pin audio connector is connected to external audio devices including speakers a nd
microphones for the input and output of audio signals to and from the system.
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WAFER-LX3 3.5" Motherboard
Figure 4-6: Audio Connector Pinouts (10-pin)
PIN NO. DESCRIPTION PIN NO. DESCRIPTION
1 Line out R 2 Line in R
3 GND 4 GND
5 Line out L 6 Line in L
7 GND 8 GND
9 MIC in 10 NC
Table 4-6: Audio Connector Pinouts (10-pin)
4.2.5 Backlight Inverter Connector
CN Label: CN3
CN Type:
CN Location:
CN Pinouts:
The backlight inverter connector provides the backlight on the LCD display connected to
the WAFER-LX3 with +12 V of power.
The battery connector is connected to a backup battery. The battery connector is also
used to reset the CMOS memory if the incorrect BIOS settings have been made and the
system cannot boot up.
A CF Type I or Type II memory card is inserted to the CF socket on the solder side of the
WAFER-LX3.
50-pin header (2x25)
See Figure 4-9
See Table 4-9
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WAFER-LX3 3.5" Motherboard
Figure 4-9: CF Card Socket Location
PIN NO. DESCRIPTION PIN NO. DESCRIPTION
1 GROUND 26 VCC-IN CHECK1
2 DATA 3 27 DATA 11
3 DATA 4 28 DATA 12
4 DATA 5 29 DATA 13
5 DATA 6 30 DATA 14
6 DATA 7 31 DATA 15
7 HDC_CS0# 32 HDC_CS1
8 N/C 33 N/C
9 GROUND 34 IOR#
10 N/C 35 IOW#
11 N/C 36 VCC_COM
12 N/C 37 IRQ15
13 VCC_COM 38 VCC_COM
14 N/C 39 CSEL
15 N/C 40 N/C
16 N/C 41 HDD_RESET
17 N/C 42 IORDY
18 SA2 43 SDREQ
19 SA1 44 SDACK#
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PIN NO. DESCRIPTION PIN NO. DESCRIPTION
20 SA0 45 HDD_ACTIVE#
21 DATA 0 46 66DET
22 DATA 1 47 DATA 8
23 DATA 2 48 DATA 9
24 N/C 49 DATA 10
25 VCC-IN CHECK2 50 GROUND
Table 4-9: CF Card Socket Pinouts
4.2.8 Fan Connector (+5 V, 3-pin)
CN Label: CN6
WAFER-LX3 3.5" Motherboard
CN Type:
CN Location:
CN Pinouts:
3-pin wafer
See Figure 4-10
See Table 4-10
The cooling fan connector provides a 5 V, 500mA current to a system cooling fan. The
connector has a "rotation" pin to get rotation signals from fans and notify the system so the
system BIOS can recognize the fan speed. Please note that only specified fans can issue
the rotation signals.
The LED connector connects to an HDD indicator LED and a power LED on the system
chassis to inform the user about HDD activity and the power on/off status of the system.
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WAFER-LX3 3.5" Motherboard
Figure 4-16: LED Connector Locations
PIN NO. DESCRIPTION
1 +5 V
2 GND
3 Power LED+
4 Power LED5 HDD LED+
6 HDD LED-
Table 4-16: LED Connector Pinouts
4.2.15 Print Connector
CN Label: CN15
CN Type:
CN Location:
CN Pinouts:
The 26-pin print connector connects to a print connector interface or some other parallel
port device such as a printer.
26-pin box header
See Figure 4-17
See Table 4-17
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WAFER-LX3 3.5" Motherboard
Figure 4-17: Parallel Port Connector Location
PIN NO. DESCRIPTION PIN NO. DESCRIPTION
1 STROBE# 2 AUTO FORM FEED #
3 DATA 0 4 ERROR#
5 DATA 1 6 INITIALIZE
7 DATA 2 8 PRINTER SELECT LN#
9 DATA 3 10 GROUND
11 DATA 4 12 GROUND
13 DATA 5 14 GROUND
15 DATA 6 16 GROUND
17 DATA 7 18 GROUND
19 ACKNOWLEDGE 20 GROUND
21 BUSY 22 GROUND
23 PAPER EMPTY 24 GROUND
25 PRINTER SELECT 26 N/C
Table 4-17: Parallel Port Connector Pinouts
4.2.16 PC/104 Slot
Page 44
CN Label: CN10
CN Type:
104-pin PC/104 slot
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WAFER-LX3 3.5" Motherboard
CN Location:
CN Pinouts:
See Figure 4-18
See Table 4-18
The PC/104 slot enables a PC/104 compatible expansion module to be connected to the
board.
4.2.20 Serial Port Connector (COM2:RS-232, COM4:RS-422/485)
CN Label: CN20
CN Type:
CN Location:
CN Pinouts:
14-pin header (2x7)
See Figure 4-22
See Table 4-22 and Table 4-23
This pin header connects to the COM2 and COM4 serial communications channels.
COM2 supports RS-232 on pins 1-10. COM4 supports RS-422/485 on pins 11-14.
Figure 4-22: RS-232 and RS-422/485 Serial Port Connector Location
The 2x4 USB pin connector provides connectivity to two USB 1.1 or two USB 2.0 ports.
The USB connector supports two USB devices. Additional external USB ports are found
8-pin header (2x4)
See Figure 4-24
See Table 4-25
on the rear panel. The USB ports are used for I/O bus expansion.
The WAFER-LX3 is equipped with two built-in RJ-45 Ethernet controllers. The controllers
can connect to the LAN through two RJ-45 LAN connectors. There are two LEDs on the
connector indicating the status of LAN. The pin assignments are listed in the following
table:
PIN DESCRIPTION PIN DESCRIPTION
1 TXD+ 5 NC
2 NC 6 RX3 TXD- 7 NC
4 RX+ 8 NC
Table 4-26: LAN Pinouts
RJ-45
See Figure 4-25
See Table 4-26
Figure 4-26: RJ-45 Ethernet Connector
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The RJ-45 Ethernet connector has two status LEDs, one green and one yello w. The green
LED indicates activity on the port and the yellow LED indicates the port is linked. See
Table 4-27.
STATUS DESCRIPTION STATUS DESCRIPTION
Green Activity YELLOW Linked
Table 4-27: RJ-45 Ethernet Connector LEDs
4.3.2 Serial Port Connector
CN Label: CN23
WAFER-LX3 3.5" Motherboard
CN Type:
CN Location:
CN Pinouts:
DB-9 connectors
See Figure 4-25
See Table 4-28 and Figure 4-27
The 9-pin DB-9 COM1 serial port connector is connected to RS-232 serial
communications devices.
The WAFER-LX3 has a single 15-pin female connector for connectivity to standard display
devices.
Figure 4-28: VGA Connector
15-pin Female
See Figure 4-25
See Figure 4-28 and Table 4-30
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PIN DESCRIPTION PIN DESCRIPTION
1 RED 2 GREEN
3 BLUE 4 NC
5 GND 6 GND
7 GND 8 GND
9 VCC 10 GND
11 NC 12 DDC DAT
13 HSYNC 14 VSYNC
15 DDCCLK
WAFER-LX3 3.5" Motherboard
Table 4-30: VGA Connector Pinouts
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WAFER-LX3 3.5" Motherboard
Chapter
5
5 Installation
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5.1 Anti-static Precautions
WARNING:
Failure to take ESD precautions during the installation of the
WAFER-LX3 may result in permanent damage to the WAFER-LX3 and
severe injury to the user.
Electrostatic discharge (ESD) can cause serious damage to electronic components,
including the WAFER-LX3. Dry climates are especially susceptible to ESD. It is therefore
critical that whenever the WAFER-LX3, or any other electrical component is handled, the
following anti-static precautions are strictly adhered to.
Wear an anti-static wristband: - Wearing a simple anti-static wristband can
WAFER-LX3 3.5" Motherboard
help to prevent ESD from damaging the board.
Self-grounding:- Before handling the board touch any grounded conducting
material. During the time the board is handled, frequently touch any
conducting materials that are connected to the ground.
Use an anti-static pad: When configuring the WA FER-LX3, place it on an
antic-static pad. This reduces the possibility of ESD damaging the
WAFER-LX3.
Only handle the edges of the PCB:-: When handling the PCB, hold the PCB
by the edges.
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WAFER-LX3 3.5" Motherboard
5.2 Installation Considerations
NOTE:
The following installation notices and installation considerations should
be read and understood before the WAFER-LX3 is installed. All
installation notices pertaining to the installation of the WAFER-LX3
should be strictly adhered to. Failing to adhere to these precautions
may lead to severe damage of the WAFER-LX3 and injury to the
person installing the motherboard.
5.2.1 Installation Notices
WARNING:
The installation instructions described in this manual should be
carefully followed in order to prevent damage to the WAFER-LX3,
WAFER-LX3 components and injury to the user.
Before and during the installation please DO the following:
Read the user manual:
oThe user manual provides a complete description of the WAFER-LX3
installation instructions and configuration options.
Wear an electrostatic discharge cuff (ESD):
oElectronic components are easily damaged by ESD. Wearing an ESD cuff
removes ESD from the body and helps prevent ESD damage.
Place the WAFER-LX3 on an antistatic pad:
oWhen installing or configuring the motherboard, place it on an antistatic
pad. This helps to prevent potential ESD damage.
Turn all power to the WAFER-LX3 off:
oWhen working with the WAFER-LX3, make sure that it is disconnected
from all power supplies and that no electricity is being fed into the system.
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Before and during the installation of the WAFER-LX3 DO NOT:
Remove any of the stickers on the PCB board. These stickers are required for
warranty validation.
Use the product before verifying all the cables and power connectors are
properly connected.
Allow screws to come in contact with the PCB circuit, connector pins, or its
components.
5.2.2 Installation Checklist
The following checklist is provided to ensure the WAFER-LX3 is properly installed.
All the items in the packing list are present
The CPU is installed
The CPU cooling kit is properly installed
WAFER-LX3 3.5" Motherboard
A compatible memory module is properly inserted into the slot
The CF Type I or CF Type II card is properly installed into the CF socket
The jumpers have been properly configured
The WAFER-LX3 is inserted into a chassis with ade quate ventilation
The correct power supply is being used
The following devices are properly connected
o Keyboard and mouse cable
o Audio kit
o Power supply
o USB cable
o Serial port cable
The following external peripheral devices are properly connected to the
chassis:
o VGA screen
o USB devices
o LAN
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WAFER-LX3 3.5" Motherboard
5.3 Unpacking
5.3.1 Unpacking Precautions
When the WAFER-LX3 is unpacked, please do the following:
Follow the anti-static precautions outlined in Section
Make sure the packing box is facing upwards so the WAFER-LX3 does not fall
out of the box.
Make sure all the packing list parts are present
NOTE:
If any packing list components are missing, please do not proceed with
the installation. Contact the IEI reseller or vendor you purchased the
WAFER-LX3 from or contact an IEI sales representative directly. To
contact an IEI sales representative, please send an email to
sales@iei.com.tw.
5.3.2 CF Card Installation
NOTE:
5.1.
The WAFER-LX3 can support both CF Type I cards and CF Type II
cards. For the complete specifications of the supported CF cards
please refer to Chapter 2.
To install the a CF card (Type 1 or Type 2) onto the WAFER-LX3, please follow the steps
below:
Step 1: Locate the CF card socket. Place the WAFER-LX3 on an anti-static pad with
the solder side facing up. Locate the CF card.
Step 2: Align the CF card. Make sure the CF card is properly aligned with the CF
socket.
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Step 3: Insert the CF card. Gently insert the CF card into the socket making sure the
WAFER-LX3 3.5" Motherboard
socket pins are properly inserted into the socket. See
Figure 5-1. Step 3:
Figure 5-1: CF Card Installation
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WAFER-LX3 3.5" Motherboard
5.4 Jumper Settings
NOTE:
A jumper is a metal bridge that is
used to close an electrical circuit. It
consists of two metal pins and a small
metal clip (often protected by a plastic
cover) that slides over the pins to
connect them. To CLOSE/SHORT a
jumper means connecting the pins of
the jumper with the plastic clip and to
OPEN a jumper means removing the plastic clip from a jumper.
Before the WAFER-LX3 is installed in the system, the jumpers must be set in accordance
with the desired configuration. The jumpers on the WAFER-LX3 are listed in
Description Label Type
AT/ATX Power Mode Select JP3 3-pin header
Compact Flash Mode Select JP4 3-pin header
Clear CMOS connector CN7 2-pin wafer
COM1 & COM2 RI and Voltage Selection JP8 10-pin header
LCD Panel Shift Clock Setting JP1 3-pin header
The CF Card Setup jumper sets the CF Type I card or CF Type II cards as either the slave
device or the master device. CF Card Setup jumper settings are shown in
Pin Description
Short 1-2 Master
Short 2-3 Slave Default
Table 5-3: CF Card Setup Jumper Settings
The CF Card Setup jumper location is shown in Figure 5-3.
If the WAFER-LX3 fails to boot due to improper BIOS settings, the CMOS can be cleared
using the battery connector. Disconnect the battery from the connector for a few seconds
then reconnect the battery. The CMOS should be cleared.
If the “CMOS Settings Wrong” message is displayed during the boot up process, the fault
may be corrected by pressing the F1 to enter the CMOS Setup menu. Do one of the
2-pin wafer
See Table 5-4
See Figure 5-4
following:
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Enter the correct CMOS setting
Load Optimal Defaults
Load Failsafe Defaults.
After having done one of the above, save the changes and exit the CMOS Setup menu.
WAFER-LX3 3.5" Motherboard
The clear CMOS jumper settings are shown in
Pin Description
Short Keep CMOS S etup Default
Open Clear CMOS Setup
Table 5-4: CN7 Clear CMOS Jumper Settings
The location of the clear CMOS jumper is shown in Figure 5-4 below.
Table 5-4.
Figure 5-4: Clear CMOS Jumper
5.4.4 COM 1/2 Pin 9 Setting Jumper
Jumper Label: JP8
10-pin header
See Table 5-5
See Figure 5-5
Table 5-5.
Page 66
Jumper Type:
Jumper Settings:
Jumper Location:
The COM 1/2 Pin 9 Setting jumper configures pin 9 on COM 1 and COM 2 as either a
+5 V, +12 V power source or as a ring-in (RI) line. The COM 1/2 Pin 9 Setting jumper
selection options are shown in
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WAFER-LX3 3.5" Motherboard
Pin Description
1–3 COM 1 RI Pin use +12 V
3–5 COM 1 RI Pin use +5 V
7–9 COM 1 RI Pin use RI Default
2–4 COM 2 RI Pin use +12 V
4–6 COM 2 RI Pin use +5 V
8–10 COM 2 RI Pin use RI Default
Table 5-5: COM 1/2 Pin 9 Setting Jumper Settings
The COM 1/2 Pin 9 Setting jumper location is shown in Figure 5-5 below.
Figure 5-5: COM 1/2 Pin 9 Setting Jumper Location
5.4.5 LCD Panel Shift Clock Setting
WARNING:
Permanent damage to the screen and WAFER-LX3 may occur if the
wrong polarity is set with this jumper. Please refer to the user guide
that came with the monitor to select the correct polarity.
Jumper Label: JP1
Jumper Type:
Jumper Settings:
3-pin header
See Table 5-6
Jumper Location:
See Figure 5-6
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The LCD Panel Shift Clock Setting jumper allows the polarity of the LCD screen clock to
WAFER-LX3 3.5" Motherboard
be set. The LCD Panel Shift Clock Setting jumper settings are shown in
Pin Description
Short 1-2 Positive polarity (normal) Default
Short 2-3 Negative polarity (invert)
Table 5-6: LCD Panel Shift Clock Setting
The LCD Voltage Selection jumper location. is shown in Figure 5-7.
Permanent damage to the screen and WAFER-LX3 may occur if the
wrong voltage is selected with this jumper. Please refer to the user
guide that came with the monitor to select the correct voltage.
The RS-422/485 Serial Port Select jumper configures the serial port connector as an
RS-422 serial port or as an RS-485 serial port. The RS-422/485 Serial Port Select jumper
selection options are shown in
Pin Description
1–2 RS-422 Default
3-pin header
See Table 5-8
See Figure 5-8
Table 5-8.
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Pin Description
3–4 RS-485
Table 5-8: Serial Port Mode Select Jumper Settings
The RS-422/485 Serial Port Select jumper location is shown in Figure 5-8 below.
WAFER-LX3 3.5" Motherboard
Figure 5-8: Serial Port Mode Select Jumper Pinout Locations
5.5 Chassis Installation
5.5.1 Airflow
WARNING:
Airflow is critical to the cooling of the CPU and other onboard
components. The chassis in which the WAFER-LX3 must have air
vents to allow cool air to move into the system and hot air to move out.
The WAFER-LX3 must be installed in a chassis with ventilation holes on the sides
allowing airflow to travel through the heat sink surface. In a system with an individual
power supply unit, the cooling fan of a power supply can also help generate airflow
Page 70
through the board surface.
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WAFER-LX3 3.5" Motherboard
NOTE:
IEI has a wide range of backplanes available. Please contact your
WAFER-LX3 vendor, reseller or an IEI sales representative at
sales@iei.com.tw or visit the IEI website (http://www.ieiworld.com.tw)
to find out more about the available chassis.
5.6 Internal Peripheral Device Connections
5.6.1 Peripheral Device Cables
The cables listed in Table 5-9 are shipped with the WAFER-LX3.
Quantity Type
1 Audio cable
1 IDE flat cable
1 RS-232/422/485 cable
1 PS/2 Y-cable
1 USB cable
Table 5-9: IEI Provided Cables
Installation of the accessories listed above are described in detail below.
5.6.2 ATA Flat Cable Connection
The ATA 66/100 flat cable connects to the WAFER-LX3 to one or two IDE devices. To
connect an IDE HDD to the WAFER-LX3 please follow the instructions below.
Step 4: Locate the IDE connector. The location/s of the IDE device connector/s is/are
shown in Chapter 3.
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Step 5: Insert the connector. Connect the IDE cable connector to the onboard
WAFER-LX3 3.5" Motherboard
connector. See
can only be inserted in one direction.
Figure 5-9. A key on the front of the cable connector ensures it
Figure 5-9: IDE Cable Connection
Step 6: Connect the cable to an IDE device. Connect the two connectors on the other
side of the cable to one or two IDE devices. Make sure that pin 1 on the cable
corresponds to pin 1 on the connector. Step 0:
5.6.3 Keyboard/Mouse Y-cable Connector
The WAFER-LX3 is shipped with a keyboard/mouse Y-cable connector. The
keyboard/mouse Y-cable connector connects to a keyboard/mouse connector on the
WAFER-LX3 and branches into two cables that are each connected to a PS/2 connector,
one for a mouse and one for a keyboard. To connect the keyboard/mouse Y-cable
connector please follow the steps below.
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WAFER-LX3 3.5" Motherboard
Step 1: Locate the connector. The location of the keyboard/mouse Y-cable connector
is shown in Chapter 3.
Step 2: Align the connectors. Correctly align pin 1 on the cable connector with pin 1 on
the WAFER-LX3 keyboard/mouse co nnector. See
Step 3: Insert the cable connectors. Once the cable connector is p rope rly aligne d wit h
the keyboard/mouse connector on the WAFER-LX3, connect the cable
connector to the onboard connectors. See
Figure 5-10.
Figure 5-10.
Figure 5-10: Keyboard/mouse Y-cable Connection
Step 4: Attach PS/2 connectors to the chassis. The keyboard/mouse Y-cable
connector is connected to two PS/2 connectors. To secure the PS/2 connectors
to the chassis please refer to the installation instructions that came with the
chassis.
Step 5: Connect the keyboard and mouse. Once the PS/2 connectors are connected
to the chassis, a keyboard and mouse can each be connected to one of the
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PS/2 connectors. The keyboard PS/2 connector and mouse PS/2 connector are
both marked. Please make sure the keyboard and mouse are connected to the
correct PS/2 connector. Step 0:
5.6.4 Parallel Port Cable without Bracket
The optional parallel port (LPT) cable respectively connects the onboard LPT 26-pin box
header to an external LPT device (like a printer). The cable comprises a 26-pin female
header, to be connected to the onboard LPT box-header, on one side and on the other
side a standard external LPT connector. To connect the LPT cable, please follow the
steps below.
Step 1: Locate the connector. The LPT con nector location is shown in Chapter 4.
Step 2: Align the connectors. Correctly align pin 1 on the cable connector with pin 1 on
WAFER-LX3 3.5" Motherboard
the PCIE-9452 LPT box-header connector. See
Step 3: Insert the cable connectors. Once the cable connector is p rope rly aligne d wit h
the 26-pin box-header connector on the PCIE-9452, connect the cable
connector to the onboard connector. See
Figure 5-11: LPT Cable Connection
Step 4: Attach the LPT connector to the chassis. To secure the LPT interface
Figure 5-11.
Figure 5-11.
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connector to the chassis please refer to the installation instructions that came
with the chassis.
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WAFER-LX3 3.5" Motherboard
Step 5: Connect LPT device. Once the LPT interface connector is co nnected to the
chassis, the LPT device can be connected to the LPT interface connector. See
Figure 5-12Step 5:\
Figure 5-12: Connect the LPT Device
5.6.5 Dual RS-232 Cable Connection (w/o bracket)
The dual RS-232/422/485 cable consists of two connectors attached to two independent
cables. Each cable is then attached to a D-sub 9-pin male connector. One DB-9 conne ctor
is reserved for RS-232 connectivity, the other DB-9 connector is reserved for RS-422/485
connectivity depending on the jumper settings. To install the dual RS-232/422/485 cable,
please follow the steps below.
Step 6: Locate the connectors. The locations of the RS-232/422/48 5 connectors are
shown in Chapter 3.
Step 7: Insert the cable connectors. Insert one connector into each serial port box
headers. A key on the front of the cable connectors ensures the connector can
only be installed in one direction.
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Figure 5-13: Dual RS-232 Cable Installation
WAFER-LX3 3.5" Motherboard
Step 8: Secure the connectors. Both the RS-232 and RS-422/485 connectors have
two retention screws that must be secured to a chassis or bracket.
Step 9: Connect the serial device. Once the DB-9 connectors are connected to a
chassis or bracket, a serial communications device can be connected to the
system. Step 0:
5.6.6 USB Cable (Dual Port without Bracket)
The WAFER-LX3 is shipped with a dual port USB 2.0 cable. To connect the USB cable
connector, please follow the steps below.
Step 1: Locate the connectors. The locations of the USB connectors are shown in
Chapter 3.
WARNING:
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If the USB pins are not properly aligned, the USB device can burn out.
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WAFER-LX3 3.5" Motherboard
Step 2: Align the connectors. The cable has two connectors. Correctly align pin 1on
each cable connector with pin 1 on the WAFER-LX3 USB con nector.
Step 3: Insert the cable connectors. Once the cable connectors are properly aligned
with the USB connectors on the WAFER-LX3, connect the cable connectors to
the onboard connectors. See
Figure 5-14: Dual USB Cable Connection
Step 4: Attach the USB connectors to the cha ssis. The USB 2.0 connectors each of
two retention screw holes. To secure the connectors to the chassis please refer
Figure 5-14.
to the installation instructions that came with the chassis.Step 0:
5.7 External Peripheral Interface Connection
The following external peripheral devices can be connected to the external peripheral
interface connectors.
To install these devices, connect the corresponding cable connector from the actual
device to the corresponding WAFER-LX3 external peripheral interface connector making
sure the pins are properly aligned.
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5.7.1 LAN Connection (Single Connector)
There are two external RJ-45 LAN connectors. The RJ-45 connectors enable connection
to an external network. To connect a LAN cable with an RJ-45 connector, please follow
the instructions below.
Step 1: Locate the RJ-45 connectors. The locations of the USB connecto rs are shown
in Chapter 4.
Step 2: Align the connectors. Align the RJ-45 connector on the LAN cable with one of
WAFER-LX3 3.5" Motherboard
the RJ-45 connectors on the WAFER-L X 3. See
Figure 5-15: LAN Connection
Figure 5-15.
Step 3: Insert the LAN cable RJ-45 connector. Once aligned, gently insert the LAN
cable RJ-45 connector into the onboard RJ-45 connector. Step 0:
5.7.2 Serial Device Connection
The WAFER-LX3 has a single female DB-9 connector on the external peripheral interface
panel for a serial device. Follow the steps below to connect a serial device to the
WAFER-LX3.
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WAFER-LX3 3.5" Motherboard
Step 1: Locate the DB-9 connector. The location of the DB-9 connector is shown in
Chapter 3.
Step 2: Insert the serial connector.Insert the DB-9 connector of a serial device into
the DB-9 connector on the external peripheral interface. See
Figure 5-16.
Figure 5-16: Serial Device Connector
Step 3: Secure the connector. Secure the serial device connector to the external
interface by tightening the two retention screws on either side of the connector.
5.7.3 USB Device Connection (Single Connector)
There are two external USB 2.0 connectors. Both connectors are perpendicular to the
WAFER-LX3. To connect a USB 2.0 or USB 1.1 device, please follow the instructions
below.
Step 1: Located the USB connectors. The locations of the USB connectors are shown
in Chapter 4.
Step 0:
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Step 2: Align the connectors. Align the USB device connector with one of the
WAFER-LX3 3.5" Motherboard
connectors on the WAFER-LX3. See
Figure 5-17.
Figure 5-17: USB Device Connection
Step 3: Insert the device connector. Once aligned, gently insert the USB device
connector into the onboard connector. Step 0:
5.7.4 VGA Monitor Connection
The WAFER-LX3 has a single female DB-15 connector on the external peripheral
interface panel. The DB-15 connector is connected to a CRT or VGA monitor. To connect
a monitor to the WAFER-LX3, please follow the instructions below.
Step 1: Locate the female DB-15 connector. The location of the female DB-15
connector is shown in Chapter 3.
Step 2: Align the VGA connector. Align the male DB-15 connector on the VGA screen
cable with the female DB-15 connector on the external peripheral interface.
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WAFER-LX3 3.5" Motherboard
Step 3: Insert the VGA connector. Once the conne ctors are prop erly aligned with the
insert the male connector from the VGA screen into the female connector on the
WAFER-LX3. See
Figure 5-18: VGA Connector
Figure 5-18.
Step 4: Secure the connector. Secure the DB-15 VGA connector from the VGA
monitor to the external interface by tightening the two retention screws on either
side of the connector.Step 0:
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WAFER-LX3 3.5" Motherboard
Chapter
6
6 BIOS
Page 82
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