3.1.1 System Requirements for 4-mm Operation ............................................................................................................... 6
3.1.2 System Void Volume................................................................................................................................................. 6
4.3.3 Deionized Water ...................................................................................................................................................... 11
SECTION 5 - EXAMPLE APPLICATIONS................................................................................. 15
5.1Production Test Chromatogram.......................................................................................................................... 16
5.2Inorganic Anions Including Chlorate and Chlorite........................................................................................... 17
5.3Resolution of Low-Concentration Analytes - EPA Water Matrix ................................................................... 18
5.4Varying the Eluent System - 22 mM Borate....................................................................................................... 19
5.5Varying the Eluent System - 10 mM Borate with Column Purge.................................................................... 20
6.1.1 Finding the Source of High System Pressure .......................................................................................................... 21
6.1.2 Replacing Column Bed Support Assemblies .......................................................................................................... 21
6.2High Background Or Noise .................................................................................................................................. 22
6.2.1 Preparation of Eluents ............................................................................................................................................. 22
6.2.3 A Contaminated Guard or Analytical Column ........................................................................................................ 23
6.2.4 A Contaminated Anion Trap Column, ATC-3 ........................................................................................................ 23
6.2.6 A Contaminated Anion Self-Regenerating Suppressor, ASRS-ULTRA ................................................................ 24
6.2.7 Contaminated Anion MicroMembrane Suppressor, AMMS III ............................................................................. 25
6.2.8 A Contaminated Anion Atlas Electrolytic Suppressor, AAES............................................................................... 25
6.3Loss of Front End Resolution............................................................................................................................... 27
6.4.1 Loss of Column Efficiency...................................................................................................................................... 27
6.4.2 Poor Resolution Due to Shortened Retention Times............................................................................................... 27
The IonPac® AS9-SC Analytical Column (P/N 043185) is designed for the analysis of inorganic anions including oxyhalides,
such as chlorate, chlorite and bromate.
The 4 x 250 mm IonPac AS9-SC Analytical Column has an ion exchange capacity of approximately 30 μeq/column. This resin
is composed of a highly cross-linked (55%) 13 micron polyethylvinylbenzene/divinylbenzene substrate agglomerated with anion
exchange latex that has been completely aminated. The latex has a polyacrylate backbone and carries the actual ion exchange sites.
The IonPac AS9-SC has nominal efficiency for sulfate using standard operating conditions of at least 14,000 plates/meter.
The IonPac AS9-SC can be operated at flow rates up to 3.0 mL/min with eluents that have a pH between 2 and 11. Eluents may
contain organic solvents from 0 - 100% in concentration. Optimally, the IonPac AS9-SC should operate at a backpressure less
than 1,100 psi at 1.0 mL/min. However, the column is capable of operating at backpressures up to 4,000 psi.
CAUTION
Eluent pH must be maintained between 2-11 or irreversible damage to the column will result.
Always remember that assistance is available for any problem that may be encountered during the shipment or
operation of DIONEX instrumentation and columns through the DIONEX North America Technical Call Center
at 1-800-DIONEX-0 (1-800-346-6390) or through any of the DIONEX Offices listed in, “DIONEX Worldwide
Offices.”
Page 6
IonPacAS9-SC034656-06Page 5 of 28
SECTION 2 - THE ION CHROMATOGRAPHY SYSTEM
CONDITION4-mm
Eluent Flow Rate3 mL/min Maximum Flow Rate
SRS SuppressorASRS-ULTRA (4-mm)
(P/N 053946)
MMS SuppressorAMMS III (4-mm)
(P/N 056750)
AES SuppressorAAES
(P/N 056116)
Injection Loop10 - 50 µL
System Void VolumeMinimize dead volumes. Switching valves, couplers can be
used. Use the GM-2 , GM-3 or recommended gradient
mixers.
PumpsUse the GP40/GP50/IP20/IP25 in Standard-Bore
Configuration.
The GM-3 Gradient Mixer should be used for gradient
analysis on systems other than the GP40/GP50/IP20/IP25
and the DX-300 HPLC Pump.
DetectorsAD20/AD25 Cell (10-mm, 9 µL, P/N 049393)
VDM-2 Cell (6-mm, 10 µL) P/N 043113
CD20, CD25, CD25A, ED40, ED50, or ED50A
Conductivity Cell with DS3
P/N 044130 or with shield P/N 044132
CDM-2/CDM-3 Cell P/N 042770
Either the TS-1 with the TS-2 can be used with the CDM-2
or the CDM-3. Do not use the TS-2 or the TS-1 with the
ED40/ED50 or the CD20/CD25.
DIONEX Back Pressure Regulator 75 psi rating (P/N
039760, 046480) or Tubing (see Table 3)
Ensure 50-75 psi back pressure.
Table 3
Tubing Back Pressures
Tubing ID
in
0.005111.4
0.00729.0
0.0107.0
0.0123.4
H20 Back Pressure
Psi/ft at 1 mL/min
Page 7
IonPacAS9-SC034656-06Page 6 of 28
SECTION 3 - INSTALLATION
3.1System Requirements
3.1.1 System Requirements for 4-mm Operation
The IonPac AS9-SC 4-mm Guard and Analytical Columns are designed to be run on the following DIONEX Ion Chromatographs
equipped with suppressed conductivity detection. Isocratic analyses at flow rates of 0.5 mL/min or greater can be performed on
a GS50/GP50/GP40/IP25, Gradient Pump Module (GPM-2) or an Advanced Gradient Pump (AGP) with standard (1/8" pistons)
pump heads. For isocratic analyses at flow rates below 0.5 mL/min and gradient analyses, a Microbore GS50/GP50/GP40 or
Advanced Gradient Pump (1/16" pistons) must be employed.
3.1.2 System Void Volume
It is important to minimize system void volume. For best performance, all of the tubing installed between the injection valve and
detector should be 0.005" (P/N 044221) ID PEEK tubing, 0.010" ID PEEK tubing (P/N 042260) or 0.012" Tefzel tubing (see,
DIONEX Product Selection Guide). Minimize the lengths of all connecting tubing and remove all unnecessary switching valves
and couplers. If you need assistance in properly configuring your system contact the nearest DIONEX Worldwide Office (see,
DIONEX Worldwide Offices).
3.2The Sample Concentrator
The Low Pressure Trace Anion Concentrator Column (TAC-LP1, P/N 046026), the Trace Anion Concentrator Column (TAC-2,
P/N 043101), the Anion MicroConcentrator, AMC-1, (P/N 051760) or the IonPac AG9-SC 4-mm Guard Column can be used for
trace anion concentration work required in high purity water analysis. The function of the TAC-LP1, the TAC-2, the AMC-1, or
the AG14A Guard Column in these applications is to strip ions from a measured volume of a relatively clean aqueous sample
matrix. This process “concentrates” all anionic analyte species onto the TAC-LP1, TAC-2, AMC-1 or the AG14A leading to a
lowering of detection limits by 2-5 orders of magnitude. The unique advantage to the analytical chemist of the TAC-LP1, the TAC2, the AMC-1, or the AG9-SC in these applications is the capability of performing routine trace analyses of sample matrix ions
at µg/L levels without extensive and laborious sample pretreatment.
3.3The Injection Loop
Table 4
Smallest Injectable Volumes (μL)
Valve TypeUsing 0.012" ID
Tefzel Tubing
DIONEX
BF2 Valve
(8 µL Internal Volume)
(10 cm Loop)
DIONEX
MicroInject Valve
(10.5 µL Internal Volume)
(14 cm Loop)
Rheodyne
Microinjection Valve
Model 9126
(0.8 µL Internal Volume)
(10 cm Loop)
15.210.513.19.2
20.514.017.612.2
8.03.35.92.0
Using 0.007" ID
Tefzel Tubing
Using 0.010" ID
PEEK Tubing
Using 0.005" ID
PEEK Tubing
Page 8
IonPacAS9-SC034656-06Page 7 of 28
3.3.1 The 4-mm System Injection Loop, 10 - 50 μL
For most applications on a 4-mm analytical system, a 10 - 50 µL injection loop will be sufficient. Generally, do not inject more
than 10 nanomoles (100 - 200 ppm) of any one analyte onto the 4-mm analytical column. Injecting larger volumes of samples
can result in overloading the column which can affect peak efficiency and resolution.
3.4The IonPac AG9-SC Guard Column
An IonPac AG9-SC Guard Column is normally used with the IonPac AS9-SC Analytical Column. Retention times will increase
by approximately 20% when a guard column is placed in-line prior to the analytical column. A guard is placed prior to the
analytical column to prevent sample contaminants from eluting onto the analytical column. It is easier to clean or replace a guard
column than it is an analytical column. Replacing the AG9-SC Guard Column at the first sign of peak efficiency loss or decreased
retention time will prolong the life of the AS9-SC Analytical Column.
3.5Installing the Anion Trap Column, ATC-3
When performing a gradient anion exchange application, a borate eluent system should be used instead of a carbonate system
because of its low background conductivity. An IonPac Anion Trap Column (ATC-3 (4-mm), P/N 059660) should be installed
between the Gradient Pump and the injection valve. Remove the high pressure Gradient Mixer if present. The ATC is filled with
high capacity anion exchange resin which helps to minimize the baseline shift caused by increasing anionic contaminant levels
in the eluent as the ionic concentration of the eluent is increased over the course of the gradient analysis.
To install the ATC-3 (4-mm), complete the following steps:
A. Remove the Gradient Mixer, if installed between the gradient pump pressure transducer and the injection valve.
B. Connect the gradient pump directly to the ATC-3. Connect a waste line to the ATC-3 outlet and direct the line to a waste
container.
C. Flush the ATC-3 (4-mm) with 200 mL of 70 mM Na2B4O7 at a flow rate of 2.0 mL/min.
D. Rinse the ATC-3 with the strongest eluent that will be used during the gradient analysis.
E. After flushing the ATC-3 with eluent, connect the ATC-3 to the eluent line that is connected to the injection valve.
The background conductivity of your system should be less than 7 µS when Na2B4O7 is being pumped through the chromatographic
system with the ASRS in-line and properly functioning. The baseline shift should be no greater than 10 µS during a borate gradient
eluent concentration ramp from 0 to 70 mM Na2B4O7. If the baseline shifts are greater than 10 µS, the ATC should be cleaned
using steps A - E above.
The ATC-3 can be flushed, at the end of each operating day, to remove any impurities that may have accumulated on it. This will
minimize periodic maintenance and lost data.
A. Flush the ATC-3 with 30 mL of 70 mM Na2B4O
7.
B. Prior to next day use of the chromatographic system, flush the ATC-3 with 30 mL of the strongest eluent used in the
gradient program.
See the Product Manual for the IonPac ATC-3 (P/N 032697) for instructions on cleaning a contaminated Anion Trap Column.
Page 9
IonPacAS9-SC034656-06Page 8 of 28
3.6Eluent Storage
IonPac AS9-SC columns are designed to be used with borate or bicarbonate/carbonate eluent systems. Storage under a helium
atmosphere ensures contamination free operation and proper pump performance (nitrogen can be used if eluents do not contain
solvents).
An Anion Self-Regenerating Suppressor should be used for applications that require suppressed conductivity detection. It is
compatible with solvent containing eluents and aqueous ionic eluents of all concentrations with which the systems and columns
are compatible. Aqueous ionic eluents can be used in all ASRS-ULTRA modes of operation.
NOTE
Solvent containing eluents should be used in the AutoSuppression External Water Mode.
If you are installing an IonPac AS9-SC 4-mm Analytical Column, use an ASRS-ULTRA (4-mm, P/N 053946).
For detailed information on the operation of the Anion Self-Regenerating Suppressor, see Document No. 031367, the “Product
Manual for the Anion Self-Regenerating Suppressor-ULTRA, the ASRS-ULTRA.”
3.8The Anion Atlas® Electrolytic Suppressor, AAES
An Atlas Anion Electrolytic Suppressor (AAES) may be used instead of an ASRS-ULTRA for applications that require
suppressed conductivity detection. The AAES (P/N 056116) can be used for AS9-SC 4-mm applications using eluents up to 25
µeq/min.
For detailed information on the operation of the Atlas Anion Electrolytic Suppressor, see Document No. 031770, the “Product
Manual for the Atlas Anion Electrolytic Suppressor.”
3.9The Anion MicroMembrane Suppressor, AMMS® III
An Anion MicroMembrane Suppressor, the AMMS III (P/N 056750) can also be used for applications that require suppressed
conductivity detection. It is compatible with all solvents and concentrations with which the systems and columns are compatible.
For detailed information on the operation of the Anion MicroMembrane Suppressor, see Document No.031727, the “Product
Manual for the Anion MicroMembrane Suppressor III, the AMMS III.”
NOTE
Do not run the AMMS III Suppressor over 40°C. If you are using an application where temperatures in excess
of 40°C are required, place the suppressor outside of the oven.
To minimize the baseline shift when performing an analysis that requires a borate gradient, a high regenerant flow rate (10 - 15
mL/min) is required. To save regenerant preparation time and reduce regenerant consumption and waste, DIONEX recommends
using an AutoRegen® Accessory (P/N 039594).
3.10 Using AutoRegen® with the ASRS-ULTRA orthe AMMS III in the Chemical Suppression Mode
To save regenerant preparation time and reduce regenerant consumption and waste, DIONEX recommends using an AutoRegen
Accessory (P/N 039594). For more detailed information on the use of the AutoRegen Accessory see the AutoRegen Accessory
manual (Document No. 032853). For more detailed information on the use of AutoRegen Regenerant Cartridges, see the “Product
Manual for the AutoRegen Regenerant Cartridge Refills” (Document No. 032852).
When using an AutoRegen System, specific contaminants are continuously removed from the regenerant solution to restore it to
the correct ionic state. It is necessary however to replace the regenerant on a regular basis. If solvents are used in the eluent, ionic
®
Page 10
IonPacAS9-SC034656-06Page 9 of 28
contaminants from the solvent component of the eluent which are not removed by the Anion AutoRegen Regenerant Cartridge
may slowly accumulate in the regenerant. This results in slowly increasing background conductivity. The rate at which the
background conductivity increases versus the required analysis sensitivity will determine how often the regenerant must be
changed.
It is not necessary to change the Anion AutoRegen Regenerant Cartridge until it is completely expended and a sudden jump to
very high background conductivity is observed.
3.11 Using Displacement Chemical Regernation (DCR) with the Chemical Suppression Mode
DIONEX recommends using the Displacement Chemical Regeneration (DCR) Mode for chemical suppression using sulfuric acid
and the Anion MicroMembrane Suppressor (AMMS III). See the DCR kit manual, Document P/N 031664, for details.
SAFETY
Use proper safety precautions in handling acids and bases.
3.12 Detector Requirements
See Section 2, “The Ion Chromatography System,” for 4-mm system detector, cell and thermal stabilizer requirements.
The selectivity of the IonPac AS9-SC 4-mm Analytical Column has been designed to separate F-, ClO
-
NO
, HPO
3
2-
and SO
4
2-
isocratically in less than 10 minutes. The AS9-SC packing is a highly cross-linked (55%), microporous
4
resin that has been agglomerated with totally permeable latex particles that are completely aminated. The latex particles carry the
actual ion exchange function - an alkanol quaternary ammonium group. The polyacrylic structure of the latex MicroBeads make
the AS9-SC compatible with pH 2-11 eluents. The highly cross-linked substrate core renders the AS9-SC compatible with eluents
containing 0-100% HPLC solvents organic solvents. The AS9-SC can be used with any suppressible ionic eluent that does not
exceed the capacity of the suppressor.
3
-
, BrO
2
-
, Cl-, NO
3
-
, Br-, ClO3,
2
4.2IonPac AS9-SC Operation Precautions
CAUTION
Filter and Degas Eluents
Filter Samples
Eluent pH between 2 and 11 and contains no hydroxide
Sample pH between 2 and 13
3 mL/min Maximum Flow Rate
4.3Chemical Purity Requirements
Obtaining reliable, consistent and accurate results requires eluents that are free of ionic impurities. Chemicals, solvents and
deionized water used to prepare eluents must be of the highest purity available. Low trace impurities and low particle levels in
eluents also help to protect your ion exchange columns and system components. DIONEX cannot guarantee proper column
performance when the quality of the chemicals, solvents and water used to prepare eluents has been compromised.
4.3.1 Inorganic Chemicals
Reagent Grade inorganic chemicals should always be used to prepare ionic eluents. Whenever possible, inorganic chemicals that
meet or surpass the latest American Chemical Society standard for purity should be used. These inorganic chemicals will detail
the purity by having an actual lot analysis on each label.
4.3.2 Solvents
Since solvents used with the IonPac AS9-SC columns are added to ionic eluents to modify the ion exchange process or improve
sample solubility, the solvents used must be free of ionic impurities. However, since most manufacturers of solvents do not test
for ionic impurities, it is important that the highest grade of solvents available be used. Currently, several manufacturers are
making ultrahigh purity solvents that are compatible for HPLC and spectrophotometric applications. These ultrahigh purity
Page 12
IonPacAS9-SC034656-06Page 11 of 28
solvents will usually ensure that your chromatography is not affected by ionic impurities in the solvent. Currently at DIONEX, we
have obtained consistent results using High Purity Solvents manufactured by Burdick and Jackson and OPTIMA® Solvents by
Fisher Scientific.
4.3.3 Deionized Water
The deionized water used to prepare eluents should be Type I Reagent Grade Water with a specific resistance of 18.2 megohmcm. The deionized water should be free of ionized impurities, organics, microorganisms and particulate matter larger than 0.2 µm.
Bottled HPLC-Grade Water (with the exception of Burdick & Jackson) should not be used since most bottled water contains an
unacceptable level of ionic impurities.
4.4Eluent Preparation
NOTE
Always degas and store all eluents in glass or plastic eluent bottles pressurized with helium. Only helium can be
used to purge and degas ionic eluents containing solvents, since nitrogen is soluble in solvent containing eluents.
The above precautions, if taken when making eluents, ensure smooth, reproducible ramps, with minimum total change in
background conductivity when using sodium carbonate/bicarbonate (isocratic) or borate (isocratic and gradient) eluents with the
AS9-SC columns.
The following table details the use of the above eluent types:
Eluent Type Selection
EluentApplication
Bicarbonate/CarbonateIsocratic Analysis
BorateIsocratic or Gradient Analysis
HydroxideDO NOT USE!
4.4.1 Preparation of Carbonate Eluent Concentrates
A. 0.5 M Sodium Carbonate (Na2CO3) Concentrate
1. Order DIONEX P/N 037162 or
2. Thoroughly dissolve 26.49 g of Na2CO3 in 400 mL of deionized water with a specific resistance of 18.2 megohmcm. Dilute to a final volume of 500 mL.
B. 0.5 M Sodium Bicarbonate (NaHCO3) Concentrate
1. Order DIONEX P/N 037163 or
Table 5
2. Thoroughly dissolve 21.00 g of NaHCO3 in 400 mL of deionized water with a specific resistance of 18.2 megohmcm. Dilute to a final volume of 500 mL.
C. 200 mM Na2CO3/75 mM NaHCO3 (100X)
The standard test eluent can be readily prepared from this 100X concentrate. This eluent concentrate can be
prepared by thoroughly dissolving 21.978 g of sodium carbonate (MW 106.00 g/mole) plus 6.301 g sodium
bicarbonate (MW 84.00 g/mole) in 700 mL of degassed, deionized water with a specific resistance of 18.2
megohm-cm in a 1 L volumetric flask. Dilute to a final volume of 1,000 mL. This solution can be diluted to make
Page 13
IonPacAS9-SC034656-06Page 12 of 28
eluents or can be used as a column regenerant.
D. AS4A Sodium Carbonate/Bicarbonate Concentrate (100X)
0.18 M Na2CO3/0.17 M NaHCO
3
1. Order DIONEX P/N 039513 or
2. Thoroughly dissolve 19.078 g of Na
and 14.282 g of NaHCO3 in 700 mL of deionized water with a
2CO3
specific resistance of 18.2 megohm-cm. Dilute to a final volume of 1,000 mL.
CAUTION
Do not use hydroxide eluents or hydroxide to adjust the pH of any eluent higher than pH 11 to effect
selectivity changes. Using eluents with pHs greater than 11 may cause irreversible damage to the IonPac
AS9-SC/AG9-SC Columns.
4.4.2 Preparation of Carbonate Eluents
A. Eluent: 2.0 mM Carbonate/0.75 mM Bicarbonate
Make the eluent by pipetting 10.0 mL of the eluent concentrate into a 1 L volumetric flask. (100X concentrate = 200
mM Na2CO3/75 mM NaHCO3.). See Section 4.1, Preparation of Eluent Concentrates for the preparation of the 100 x
eluent concentrate. Use degassed, deionized water with a specific resistance of 18.2 megohm-cm to dilute the
concentrate to a final volume of 1,000 mL.
4.4.3 Preparation of Borate Eluents
A. Eluent : 22 mM H3BO3/22 mM Na2B4O
7
Thoroughly dissolve 8.391 g Na2B4O7/10 H2O (MW 381.42 g/mole) plus 1.360 g H3BO3 (MW 61.84 g/mole) in 700
mL degassed, deionized water with a specific resistance of 18.2 megohm-cm in a 1 L volumetric flask. Dilute to a final
volume of 1,000 mL.
B. Eluent Preparation for Gradient Program
1. Eluent : 10 mM H3BO3/10 mM Na2B4O
7
Thoroughly dissolve 3.814 g Na2B4O7?10 H2O (MW 381.42 g/mole) plus 0.618 g H3BO3 (MW 61.84 g/mole) in
700 mL degassed, deionized water with a specific resistance of 18.2 megohm-cm in a 1 L volumetric flask. Dilute
to a final volume of 1,000 mL.
2. Purge: 50 mM H3BO3/50 mM Na2B4O
7
Thoroughly dissolve 19.071 g Na2B4O7?10 H2O (MW 381.42 g/mole) plus 3.092 g H3BO3 (MW 61.84 g/mole)
in 700 mL degassed, deionized water with a specific resistance of 18.2 megohm-cm in a 1 L volumetric flask.
Dilute to a final volume of 1,000 mL.
4.5The Borate Eluent System
The borate eluent system gives the same elution order on the AS9-SC column as the carbonate eluent system (see Figure 4, Anion
Separation using 22 mM Borate Eluent). However, the borate anion is a weaker “pusher” ion than carbonate. Therefore a higher
concentration borate eluent is required to provide the same elution times observed with a carbonate eluent system. The major
advantage of the borate system is that early eluting ions (i.e., fluoride, nitrate) can be easily spread out thus improving resolution
simply by using a more dilute eluent (see Figure 5, Anion Separation using 10 mM Borate Eluent with Column Purge after Nitrate).
Carbonate eluent systems can also be diluted to produce a similar effect but not as reliably due to carbon dioxide intrusion from
the air. This improvement in resolution is especially beneficial when doing sub-ppm determinations of early eluting ions such as
chlorite and bromate in the presence of high amounts of common anions such as fluoride and chloride.
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IonPacAS9-SC034656-06Page 13 of 28
4.6Eluents that Contain Solvents
When mixing solvents with water remember to mix solvent with water on a volume to volume basis. For example, if a procedure
requires an eluent of 90% acetonitrile, prepare the eluent by adding 900 mL of acetonitrile to an eluent reservoir. Then add 100
mL of deionized water to the acetonitrile in the reservoir. Using this procedure to mix solvents with water will ensure that a
consistent true volume/volume eluent is obtained. Premixing water with solvent will minimize the possibility of outgassing.
NOTE
When degassing eluents containing solvents, do not degas the eluent excessively since it is possible that a volatile
solvent can be “boiled” off from the solution.
The AS9-SC can withstand common HPLC solvents in a concentration range of 0 - 100%. Solvents and water should be premixed
in concentrations to allow proper mixing by the gradient pump and to minimize outgassing. Ensure that all of the inorganic
chemicals are soluble in the highest solvent concentration to be used during the analysis so that salts do not precipitate out in either
the pump or the column.
When using a solvent in an ionic eluent, column generated backpressures will depend on the solvent used, concentration of the
solvent, the ionic strength of the eluent and the flow rate used. The column back pressure will vary as the composition of watermethanol and water-acetonitrile mixture varies.
The practical backpressure limit for the IonPac AS9-SC columns is 4,000 psi. Therefore, any combination of the above,
contributing to operating backpressure that totals up to 4,000 psi, can be used.
4.7Regenerant Preparation for the AMMS III
The regenerant is 50 mN sulfuric acid. Dilute 100 mL (about 100 g) of 0.50 N sulfuric acid (P/N 037164 or P/N 039601) to 1 L
using deionized water. If you are not using the AutoRegen Accessory (P/N 039594), prepare several liters of the regenerant.
For a guide to properly adjusting the regenerant flow rate, see Document No. 031727, the Product Manual for the Anion
MicroMembrane Suppressor III, the AMMS III.
Page 15
IonPacAS9-SC034656-06Page 14 of 28
4.8The Sample Concentrator
The Low Pressure Trace Anion Concentrator Column (TAC-LP1, P/N 046026), the Trace Anion Concentrator Column (TAC-2,
P/N 043101), the Anion MicroConcentrator, AMC-1, (P/N 051760) or the IonPac AG9-SC 4-mm Guard Column can be used for
trace anion concentration work required in high purity water analysis. The function of the TAC-LP1, the TAC-2, the AMC-1, or
the AG9-SC Guard Column in these applications is to strip ions from a measured volume of a relatively clean aqueous sample
matrix. This process “concentrates” all anionic analyte species onto the TAC-LP1, TAC-2, AMC-1 or the AG9-SC leading to a
lowering of detection limits by 2-5 orders of magnitude.
The concentrator column is used in lieu of the sample loop. Pump the sample onto the concentrator column in the OPPOSITE
direction of the eluent flow. When using concentration techniques, do not overload the concentrator column by concentrating an
excessive amount of sample. Concentrating an excessive amount of sample can result in inaccurate results being obtained. It is
possible during the concentration step for the polyvalent anions such as phosphate and sulfate to elute the weakly retained anions
such as fluoride and acetate off the concentrator column.
For a detailed discussion of anion concentration techniques, refer to Section 3, Operation, of the Trace Anion Concentrator (TAC-
2) Column Product Manual (Document No. 034467). For further information on the AMC-1 (P/N 051760) see, Product Manual
for AMC-1 Anion MicroConcentrator Column, Document No. 031262.
Page 16
IonPacAS9-SC034656-06Page 15 of 28
SECTION 5 - EXAMPLE APPLICATIONS
Before attempting any of the following example applications, take the time to ensure that your system is properly configured.
Ensure that all of the eluents have been made from high purity reagents and deionized water. All water used in the preparation
of eluents should be degassed, deionized water. For chemical purity requirements, see Section 4.3, Chemical Purity Requirements.
After running synthetic standards to calibrate your system, you may find that real sample matrices foul your columns. For this
reason it is always advisable to use a guard column to protect the analytical column. If column performance deteriorates and it
is determined that the guard or the analytical column has been fouled, refer to the column cleanup protocols in, Column Care.
If your sample matrices are relatively low in ionic concentration, you may be able to increase the sensitivity of your system by
using sample concentration techniques (see Section 3.2, Sample Concentrator).
Page 17
IonPacAS9-SC034656-06Page 16 of 28
5.1Production Test Chromatogram
Isocratic elution of anions on the IonPac AS9-SC Analytical Column has been optimized utilizing a carbonate/bicarbonate eluent.
By using this eluent, mono- and divalent anions, including oxyhalides can be isocratically separated and quantitated in a single
injection. To guarantee that all IonPac AS9-SC (4-mm) Analytical Columns meet high quality and reproducible performance
specification standards, all columns undergo the following production control test.
5.2Inorganic Anions Including Chlorate and Chlorite
Separation and elution of anions on the IonPac AS9-SC Analytical Column has been optimized utilizing a carbonate/bicarbonate
eluent. By using this eluent, monovalent and divalent anions can be isocratically separated and quantitated in a single injection.
The carbonate/bicarbonate mixture allows the strength of the eluent, and thus the selectivity of the system to be changed by varying
the HCO
conductivity (14-18 µS) suitable for isocratic analysis. For samples with similar concentrations of ions, the run time can be
decreased to 1/2 the standard run time by doubling the flow rate. For samples with highly variable concentrations, additional
resolution can be obtained at lower flow rates (see Section 4.4, Resolution of Low-Concentration Analytes).
or AES Suppressor:Anion Atlas Electrolytic Suppressor, AAES
or MMS Suppressor:Anion MicroMembrane Suppressor, AMMS III
MMS Regenerant:25-50 mN H2SO
Expected Background Conductivity:12-16 µS
Long-term Storage Solution (> 1 week):100 mM Sodium Bicarbonate
Short-term Storage Solution (< 1 week):Eluent
-
2-
/CO
ratio. Furthermore, the suppressor reaction product is carbonic acid (H2CO3) and results in a low background
3
3
3
AutoSuppression Recycle Mode
4
15
10
S
μ
0
-5
5
8
7
2
6
5
1
4
3
9
Flow Rate = 2.0 mL/min
0
510
Minutes
Analytemg/L
1. Fluoride1.0
2. Chlorite5.0
3. Bromate1.0
4. Chloride1.5
5. Nitrite5.0
6. Bromide15.0
7. Chlorate15.0
8. Nitrate15.0
9. Phosphate20.0
15
10
10
S
μ
2
5
1
4
3
8
7
6
9
10. Sulfate25.0
10
5
0
Flow Rate = 1.0 mL/min
-5
05101520
Minutes
Inorganic Anions including Chlorate, Chlorite and Bromate
Figure 2
Page 19
IonPacAS9-SC034656-06Page 18 of 28
5.3Resolution of Low-Concentration Analytes - EPA Water Matrix
The following example demonstrates the separation of sample analytes having highly variable concentrations. Setting the flow
rate at 1.0 mL/min allows for increased resolution of very low concentration analytes such as bromate, chlorite, and chlorate in
the following EPA water matrix sample.
The borate eluent gives the same elution order as the carbonate eluent traditionally used on the IonPac AS9. However, since
the borate anion is a “weaker” eluent ion, higher concentrations are required to achieve the same elution time. The advantage
of the borate eluent is increased resolution of early eluting ions.
5.5Varying the Eluent System - 10 mM Borate with Column Purge
A low concentration of borate is used to improve resolution of early eluting peaks. This is particularly beneficial when
quanititating chlorite and bromate at sub-ppm levels in the presence of high amounts of fluoride and chloride. High amounts
of nitrate, phosphate, or sulfate can be rapidly removed from the column using a step change to a higher borate concentration.
Dilute borate eluents are less affected by CO2 contamination from the air than dilute carbonate eluents. The Thermal Stabilizer
(TS-2, P/N 043117) was incorporated in this analysis for high sensitivity baseline stabilization.
Sample Loop Volume:50 µL
Analytical Column:IonPac AS9-SC Analytical Column
Eluent:10 mM H3BO3/10 mM Na2B4O
with step change at 15.1 minutes to
Purge:50 mM H
Eluent Flow Rate:2.0 mL/min
The purpose of the Troubleshooting Guide is to help you solve operating problems that may arise while using IonPac AS9-SC
columns. For more information on problems that originate with the Ion Chromatograph (IC) or the suppressor refer to the
Troubleshooting Guide in the appropriate operator’s manual. If you cannot solve the problem on your own, call the DIONEX
Worldwide Office nearest you (see, DIONEX Worldwide Offices).
6.1High Backpressure
6.1.1 Finding the Source of High System Pressure
Total system pressure when using the IonPac AG9-SC (4-mm) Guard and AS9-SC (4-mm) Analytical Columns at 1.0 mL/min
should also be less than 1,500 psi when using the test chromatogram conditions. Refer to Section 3.4, Eluent Preparation, to see
how solvent concentration can affect the column operating pressure. If the system pressure is higher than 2,000 psi, it is advisable
to determine the cause of the high system pressure. The system should be operated with a High-Pressure In-Line Filter (P/N
035331) which is positioned between the Gradient Pump pressure transducer and the injection valve. Make sure you have one
in place and that it is not contaminated.
A. Make sure that the pump is set to the correct eluent flow rate. Higher than recommended eluent flow rates will cause
higher pressure. Measure the pump flow rate if necessary with a stop watch and graduated cylinder.
B. Determine which part of the system is causing the high pressure. High pressure could be due to a plugged tubing or
tubing with collapsed walls, an injection valve with a clogged port, a column with particulates clogging the bed
support, a clogged High-Pressure In-Line Filter, the suppressor or the detector cell.
To determine which part of the chromatographic system is causing the problem, disconnect the pump eluent line from
the injection valve and turn the pump on. Watch the pressure; it should not exceed 50 psi. Continue adding system
components (injection valve, column(s), suppressor and detector) one by one, while monitoring the system pressure.
The pressure should increase up to a maximum of 1,500 psi when the column(s) are connected. The Anion
MicroMembrane Suppressor may add up to 100 psi. No other components should add more than 100 psi of pressure.
Refer to the appropriate manual for cleanup or replacement of the problem component.
6.1.2 Replacing Column Bed Support Assemblies
If the column inlet bed support is determined to be the cause of the high backpressure, it should be replaced. To change the inlet
bed support assembly, refer to the following instructions, using one of the two spare inlet bed support assemblies included in the
Ship Kit.
A. Disconnect the column from the system.
B. Using two open end wrenches, carefully unscrew the inlet (top) column fitting.
C. Turn the end fitting over and tap it against a benchtop or other hard, flat surface to remove the bed support and seal
assembly. If the bed support must be pried out of the end fitting, use a sharp pointed object such as a pair of tweezers,
but be careful that you DO NOT SCRATCH THE WALLS OF THE END FITTING. Discard the old bed support
assembly.
D. Place a new bed support assembly into the end fitting. Make sure that the end of the column tube is clean and free of
any particulate matter so that it will properly seal against the bed support assembly. Use the end of the column to
carefully start the bed support assembly into the end fitting.
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IonPacAS9-SC034656-06Page 22 of 28
IonPac AS9-SC
4-mm Columns
Part(P/N)
Analytical Column043185
Guard Column043186
Bed Support Assembly042955
End Fitting052809
CAUTION
If the column tube end is not clean when inserted into the end fitting, particulate matter may obstruct a proper seal
between the end of the column tube and the bed support assembly. If this is the case, additional tightening may
not seal the column but instead damage the column tube or the end fitting.
E. Screw the end fitting back onto the column. Tighten it fingertight, then an additional 1/4 turn (25 in x lb). Tighten
further only if leaks are observed.
F. Reconnect the column to the system and resume operation.
NOTE
Replace the outlet bed support ONLY if high pressure persists after replacement of the inlet fitting.
6.2High Background Or Noise
In a properly working system, the background conductivity level for the standard eluent system is shown below:
ELUENTEXPECTED BACKGROUND CONDUCTIVITY
1.8 mM Na2CO3/1.7 mM NaHCO
5 mM Na2B4O
10 mM Na2B4O
22 mM Na2B4O
7
7
7
3
14 - 18 µS
3 - 4 µS
4 - 6 µS
5 - 7 µS
6.2.1 Preparation of Eluents
A. Make sure that the eluents and the regenerant are made correctly.
B. Make sure that the eluents are made from chemicals with the recommended purity.
C. Make sure that the deionized water used to prepare the reagents has a specific resistance of 18.2 megohm-cm.
6.2.2 Borate Eluent Precautions
When using the borate eluent a few precautions should be kept in mind.
Baseline Stability
In order to have the expected baseline stability, the Anion MicroMembrane Suppressor III, AMMS III or the
ASRS-ULTRA, must be reliably removing all the cations (e.g., sodium) when using the standard carbonate eluent,
the AMMS III or the ASRS-ULTRA has only to remove 5.3 mM sodium. However, when using a 22 mM borate eluent,
the AMMS III or the ASRS-ULTRA has to remove 44 mM sodium. The AMMS III or the ASRS-ULTRA is fully
capable of removing this level of sodium, but only if it is functioning at optimum efficiency. If it is not, then a high
Page 24
IonPacAS9-SC034656-06Page 23 of 28
and varying baseline will result. In this case the AMMS III or the ASRS-ULTRA will need to be serviced as outlined
in the AMMS III manual (see Document No. 031727, Product Manual for the Anion MicroMembrane Suppressor III,
the AMMS III or Document No. 031367, the “Product Manual for the Anion Self-Regenerating Suppressor-ULTRA,
the ASRS-ULTRA.”)
Carbonate Peak
When using a carbonate eluent, carbonate in the sample is not normally evident in the chromatogram. However, when
using other eluents (e.g., borate) a carbonate peak will be observed. The elution time of this peak will depend upon
the pH of the eluent. The higher the pH, the higher the carbonate/bicarbonate ratio. The divalent carbonate form tends
to elute later then the bicarbonate form. The converse is true as the pH is lowered. The borate eluent described in this
manual is an equimolar solution of sodium tetraborate and boric acid. The boric acid is added to lower the tetraborate
eluent pH. This places the carbonate peak between chloride and nitrite (see Figure 5, Anion Separation using 22 mM
Borate Eluent) when using a 22 mM borate eluent formulation. When using a more dilute eluent the carbonate is
retained longer since it is divalent. This explains why the carbonate peak elutes after the nitrite peak when using the
10 mM borate eluent formulation. Since the carbonate peak is reduced by almost two orders of magnitude during
passage through the AMMS III or the ASRS-ULTRA, this method is not useful for carbonate quantification.
Eluent Impurities
Use an Anion Trap Column (ATC-3, P/N 059660) to retard divalent anion contaminants (e.g., sulfate) in dilute eluents
(e.g., 10 mM borate) so that they do not concentrate on the analytical column when the dilute eluent is being run through
the column and then elute as sharp bands when the following strong eluent (e.g., 50 mM borate) is pumped through
the column. Dilute eluent contaminants eluting as sharp bands in the strong eluent can interfere with the quantification
of sample divalent anions (see Figure 6, Anion Separation using 10 mM Borate Eluent with Column Purge after
Nitrate). If the tetraborate salts or deionized water are contaminated (e.g., with sulfate) this will prolong the
reequilibration process from the strong eluent back to the dilute eluent.
6.2.3 A Contaminated Guard or Analytical Column
Remove the IonPac AG9-SC Guard and AS9-SC Analytical Columns from the system. If the background conductivity decreases,
the column(s) is (are) the cause of the high background conductivity. Clean or replace the AG9-SC at the first sign of column
performance degradation (compared to the original test chromatogram) to eliminate downtime. Clean the column(s) as instructed
in “Column Care.”
6.2.4 A Contaminated Anion Trap Column, ATC-3
When doing gradient analysis, has the Anion Trap Column, the ATC-3 (4-mm) been installed correctly? If it has not, install one
as directed in Section 3.5, Installing the Anion Trap Column, and watch the background conductivity. If the background
conductivity is now low, this means that the ATC-3 is trapping contaminants from the eluent. The eluents probably have too many
impurities (see items 1 - 3 above).
If the ATC-3 is already installed, remove it. Is the background conductivity still high? If the background conductivity decreases,
the ATC-3 is the source of the high background conductivity.
A. Disconnect the ATC-3 (4-mm) from the injection valve and direct the outlet to waste.
B. Flush the ATC-3 with 200 mL of 70 mM Na2B4O7 at 2.0 mL/min on a 4-mm system.
C. Equilibrate the ATC-3 with the strongest eluent used during the gradient run. Use a flow rate of 2.0 mL/min on a 4-
mm system.
D. If the problem persists, replace the ATC-3.
Page 25
IonPacAS9-SC034656-06Page 24 of 28
6.2.5 Contaminated Hardware
To eliminate the hardware as the source of the high background conductivity, bypass the columns and the suppressor. Pump
deionized water with a specific resistance of 18.2 megohm-cm through the system. The background conductivity should be less
than 2 µS. If it is not, check the detector/conductivity cell calibration by injecting deionized water directly into it. See the
appropriate manual for details.
B. Check to see if the eluent compositions and concentrations are correct. An eluent that is too concentrated will cause
the peaks to elute faster. Prepare fresh eluent. If you are using a gradient pump to proportion the eluent, components
from two or three different eluent reservoirs, the resulting eluent composition may not be accurate enough for the
application. Use one reservoir containing the correct eluent composition to see if this is the problem. This may be a
problem when one of the proportioned eluents is less than 5%.
C. Column contamination can lead to a loss of column capacity because all of the anion exchange sites will no longer be
available for the sample ions. For example, polyvalent anions from the sample or metals may concentrate on the
column. Refer to “Column Care,” for recommended column cleanup procedures.
Possible sources of column contamination are impurities in chemicals and in the deionized water used for eluents or
components of the sample matrix.. Be especially careful to make sure that the recommended chemicals are used. The
deionized water should have a specific resistance of at least 18.2 megohm-cm.
D. Diluting the eluent will improve peak resolution, but will also increase the analytes’ retention times. If a 10% dilution
of the eluent is not sufficient to obtain the desired peak resolution, or if the resulting increase in retention times is
unacceptable, clean the column (see “Column Care”).
After cleaning the column, reinstall it in the system and let it equilibrate with eluent for about 30 minutes. The column
is equilibrated when consecutive injections of the standard give reproducible retention times. The original column
capacity should be restored by this treatment, since the contaminants should be eluted from the column. If you need
assistance in solving resolution problems, contact the nearest DIONEX Worldwide Office (see, DIONEX Worldwide
Offices)
6.2.6 A Contaminated Anion Self-Regenerating Suppressor, ASRS-ULTRA
This section describes routine cleanup procedures for the Anion Self-Regenerating Suppressors (ASRS-ULTRA) in the case of
contamination. Consult the Troubleshooting Guide (see Section 4, “Troubleshooting Guide”) to first determine that the system
is operating properly. If the ASRS-ULTRA is determined to be the source of higher than normal back pressure, higher than
anticipated conductivity, decreased suppression capacity or decreased sensitivity, cleaning the membrane may restore the
performance of the system. Use the following procedures to clean the membrane.
Metal Contaminants or Precipitates
NOTE
The suppressor voltage is a good indicator of the resistance across the suppressor. Higher resistance may indicate
contamination of the suppressor. For more information regarding monitoring the voltage, see Document No.
031814-02, “Removal of Iron Contamination from Electrolytic Suppressors.”
A. Turn off the SRS Control unit.
B. Disconnect the analytical (and guard) column(s) from the injection valve and the ASRS-ULTRA. Refer to the specific
analytical column Product Manual for column cleanup procedures.
C. If you are running in the AutoSuppression External Water Mode, turn off the external water and disconnect the
external water line from the ASRS-ULTRA REGEN IN port.
Page 26
IonPacAS9-SC034656-06Page 25 of 28
D. Disconnect the liquid line from the ASRS-ULTRA ELUENT OUT port to the cell at the cell fitting and reconnect it
to the REGEN IN port.
E. Connect a temporary line from the priming block or the low-pressure tee on the isocratic or gradient pump to a
container with a solution of 0.2 M oxalic acid. Pump this solution through the ASRS-ULTRA (4-mm) at 1-2 mL/min
for 30 minutes.
NOTE
Bypassing internal pump manifolds when temporarily pumping high concentration cleaning solutions significantly
reduces the time required to reequilibrate the system to low concentration eluents.
F. Flush the ASRS-ULTRA with deionized water for 10 minutes.
G. Perform steps A - D of the procedure in Section 4.1, “Small Analyte Peak Areas.”
H. Turn on the SRS Control unit for the AutoSuppression Recycle or External Water Modes of operation. Ensure that
the SRS Control unit is
off for the Chemical Suppression Mode of operation.
I.Flush the ASRS-ULTRA with eluent for 10 minutes.
J.Reinstall the analytical (and guard) column(s). Begin pumping eluent through the system at the flow rate required for
your analysis and equilibrate the system.
6.2.7 Contaminated Anion MicroMembrane Suppressor, AMMS III
A. Check the regenerant flow rate at the REGEN OUT port of the AMMS. For the example isocratic applications,
this flow rate should be 3 - 5 mL/min.
B. Check the eluent flow rate. In general, the eluent flow rate for 4-mm applications, it should be 1.0 mL/min. Refer
to the Anion MicroMembrane Suppressor Product Manual (Document No. 034449-02) for assistance in determining
that the eluent is within suppressible limits.
C. If you are using an AutoRegen Accessory with the MMS, prepare fresh regenerant solution. Test both the
suppressor and the AutoRegen Regenerant Cartridge for contamination.
1. If the background conductivity is high after preparing fresh regenerant and bypassing the AutoRegen
Regenerant Cartridge, you probably need to clean or replace your MMS.
2. If the background conductivity is low when freshly prepared regenerant is run through the MMS without an
AutoRegen Accessory in-line, test the AutoRegen Regenerant Cartridge to see if it is expended. Connect the
freshly prepared regenerant to the AutoRegen Regenerant Cartridge. Pump approximately 200 mL of regenerant
through the AutoRegen Regenerant Cartridge to waste before recycling the regenerant back to the regenerant
reservoir. If the background conductivity is high after placing the AutoRegen Accessory in-line, you probably
need to replace the AutoRegen Regenerant Cartridge. Refer to the “AutoRegen Regenerant Cartridge Refill
Product Manual” (Document No. 032852) for assistance.
6.2.8 A Contaminated Anion Atlas Electrolytic Suppressor, AAES
Metal Contaminants or Precipitates
A. Turn off the power to the AAES.
B. Disconnect the analytical (and guard) column(s) from the injection valve and the AAES. Refer to the specific analytical
column Product Manual for column cleanup procedures.
Page 27
IonPacAS9-SC034656-06Page 26 of 28
C. If you are running in the AutoSuppression External Water Mode, turn off the external water and disconnect the
external water line from the AAES REGEN IN port.
D. Disconnect the liquid line from the AAES ELUENT OUT port to the cell at the cell fitting and reconnect it to the
REGEN IN port.
E. Connect a temporary line from the priming block or the low-pressure tee on the isocratic or gradient pump to a
container with a solution of 0.5 M oxalic acid. Pass 60 mL of this solution through the AAES using the Trap Column
/ Suppressor Clean-up Kit (P/N 059649) or pump this solution through the AAES at 2.0 mL/min for 30 minutes.
NOTE
Bypassing internal pump manifolds when temporarily pumping high concentration cleaning solutions significantly
reduces the time required to re-equilibrate the system to low concentration eluents.
F. Flush the AAES with deionized water at 2 mL/min for 30 minutes.
G. Reinstall the AAES according to procedures in Section 4.2.1, “Eluent and Regenerant Flow Path Connections in the
AutoSuppression Recycle Mode Operation” or Section 4.3.1, “Eluent Flow Path Connections in the AutoSuppression
External Water Mode Operation” and resume operation.
Organic Contaminants
A. Turn off the power to the AAES.
B. Disconnect the analytical (and guard) column(s) from the injection valve and the AAES. Refer to the specific analytical
column Product Manual for column cleanup procedures.
C. If you are running in the AutoSuppression External Water Mode, turn off the external water and disconnect the
external water line from the AAES REGEN IN port. If you are running in the AutoSuppression Recycle Mode,
proceed to D.
D. Disconnect the liquid line from the AAES ELUENT OUT port to the cell at the cell fitting and reconnect it to the
REGEN IN port.
E. Connect a temporary line from the priming block or the low-pressure tee on the isocratic or gradient pump to a
container with a solution of freshly prepared 10% 1.0 M H
/90% acetonitrile. H2SO4/acetonitrile solutions are not
2SO4
stable during long term storage so this cleanup solution must be made immediately before each column cleanup.
Alternatively, it can be proportioned from 1 bottle containing 1.0 M H2SO4 and another bottle containing 100%
acetonitrile. Pass 60 mL of this solution through the AAES using the Trap Column / Suppressor Clean-up Kit (P/N
059649) or pump this solution through the AAES at 1.0 mL/min for 60 minutes.
NOTE
Bypassing internal pump manifolds when temporarily pumping high concentration cleaning solutions significantly
reduces the time required to re-equilibrate the system to low concentration eluents.
F. Flush the AAES with deionized water at 2 mL/min for 30 minutes.
G. Reinstall the AAES according to procedures in Section 4.2.1, “Eluent and Regenerant Flow Path Connections in the
AutoSuppression Recycle Mode Operation” or Section 4.3.1, “Eluent Flow Path Connections in the AutoSuppression
External Water Mode Operation” and resume operation.
Page 28
IonPacAS9-SC034656-06Page 27 of 28
6.3Loss of Front End Resolution
If poor resolution or efficiency is observed for the peaks eluting near the system void volume compared to the later eluting peaks,
check the following:
A. Improper eluent concentration may be the problem. Remake the eluent as required for your application. Ensure that
the water and chemicals used are of the required purity.
B. Column overloading may be the problem. Reduce the amount of sample ions being injected onto the analytical column
by either diluting the sample or injecting a smaller volume onto the column.
C. Sluggish operation of the injection valve may be the problem. Check the air pressure and make sure there are no gas
leaks or partially plugged port faces. Refer to the valve manual for instructions.
D. Improperly swept out volumes anywhere in the system prior to the guard and analytical columns may be the problem.
Swap components, one at a time, in the system prior to the analytical column and test for front-end resolution after
every system change.
6.4Poor Peak Resolution
Poor peak resolution can be due any or all of the following factors.
6.4.1 Loss of Column Efficiency
A. Extra-column effects can result in sample band dispersion, making the peaks' elution less efficient. Make sure you are
using PEEK tubing with an ID of no greater than 0.010" to make all eluent liquid line connections between the injection
valve and the detector cell inlet, and that the tubing lengths are as short as possible. Check for leaks.
B. Check to see if headspace has developed in the guard or analytical column (e.g., due to improper use of the column
such as submitting it to high pressures). Remove the column’s top end fitting (see Section 5.1.2, Replacing Column
Bed Support Assemblies). If the resin does not fill the column body all the way to the top, it means that the resin bed
has collapsed, creating a headspace. The column must be replaced.
6.4.2 Poor Resolution Due to Shortened Retention Times
Even with adequate system and column efficiency, resolution of peaks will be compromised if analytes elute too fast.
A. Ensure that the eluent flow rate is equivalent to the flow rate specified by the analytical protocol. Measure the eluent
flow rate after the column using a stopwatch and graduated cylinder.
6.5Spurious Peaks
A. If the samples contain an appreciable level of polyvalent ions and the column is used with a weak eluent system,
polyvalent anions may contaminate the analytical column. The retention times for the analytes will then decrease and
spurious, inefficient (broad) peaks can show up at unexpected times. Clean the column as indicated in “Column Care.”
B. If you need assistance in determining the best way to clean strongly retained solutes in your specific sample matrix
from the IonPac AS9-SC columns, contact the nearest DIONEX Worldwide Office (see, DIONEX Worldwide
Offices).
C. When an injection valve is actuated, the possibility of creating a baseline disturbance exists. This baseline upset can
show up as a peak of varying size and shape. This will occur when the injection valve needs to be cleaned or retorqued
(see valve manual). Check to see that there are no restrictions in the tubing connected to the valve. Also check the valve
Page 29
IonPacAS9-SC034656-06Page 28 of 28
port faces for blockage and replace them if necessary. Refer to the Valve Manual for troubleshooting and service
procedures. Small baseline disturbances at the beginning or at the end of the chromatogram can be overlooked as long
as they do not interfere with the quantification of the peaks of interest.
For DX-300 systems equipped with a Rheodyne Microinjection Valve, Model 9126 (DIONEX P/N 044697), consult
the accompanying manual for service instructions.
Page 30
IonPac AS9-SC Column Care Document No. 034656C06 Page 1 of 4
RECOMMENDED OPERATION PRESSURES
Operating a column above its recommended pressure limit can cause irreversible loss of column performance. The maximum
recommended operating pressure for IonPac AS9-SC columns is 4,000 psi.
COLUMN START-UP
The column is shipped in 2.0 mM Na2CO3/0.75 mM NaHCO3 (Eluent) storage solution.
Prepare the eluent shown on the test chromatogram, install the column in the chromatography module and test the column
performance under the conditions described in the test chromatogram. Continue making injection s of the test standard until
consecutive injections of the standard give reproducible retention times. Equilibration is complete when consecutive
injections of the standard give reproducible retention times.
COLUMN STORAGE
For short-term storage (< 1 week), use Eluent, for long-term storage (> 1 week), use 100 mM Sodium Bicarbonate as the
storage solution. Flush the column with storage solution for a minimum of 10 minutes. Cap both ends securely, using the
plugs supplied with the column.
COLUMN CLEANUP
The following column cleanup protocols have been divided into three general isocratic protocols to remove acid-soluble,
basesoluble or organic contaminants. They can be combined into one gradient protocol if desired but the following
precautions should be observed.
Always ensure that the cleanup protocol used does not switch between eluents quickly, creating high pressure eluent interface
bands in the column. High pressure bands can disrupt the uniformity of the packing of the column bed and irreversibly
damage the performance of the column. High pressure bands i.n the column can be created by pumping successive eluents
that are not miscible through the column, that have eluent components in one eluent that will precipitate out when added to
the second eluent or by using an acidic eluent followed by a basic eluent with may create a neutralization pressure band. The
precipitation of the salts in solvents during column rinses can result in very high pressure bands. High viscosity mixing bands
can be created between two eluents having solvents with a very high energy of mixing.
Page 31
IonPac AS9-SC Column Care Document No. 034656C06 Page 2 of 4
BASE-SOLUBLE CONTAMINANTS
WARNING
Do not use the standard NaOH procedure described in other
DIONEX documentation for base cleanup of IonPac AS9-SC/AG9-SC Columns.
This procedure will destroy IonPac AS9-SC/AG9-SC Columns
A. Prepare a 500 mL solution of 200 mM Na
B. Disconnect the anion suppressor from the IonPac AS9-SC Analytical Column. If your system is configured with both a
guard column and an an alytical column, reverse th e order of the guard and analytical column in the eluent flow path.
Double check that the eluent flows in the direction designated on each of the column labels. Direct the effluent from the
outlet line of the AS9-SC Guard Column to a separate waste container.
When cleaning an analytical column and a guard column in series, ensure that the guard column is placed after the
analytical column in the eluent flow path. Contaminants that have accumulated on the guard column can be eluted
onto the analytical column and irreversibly damage it. If in doubt, clean each column separately.
C. Set the pump flow rate to 1.0 mL/min.
D. If your eluent contains a solvent that is not compatible with the cleanup solution of 200 mM Na
rinse the column for 15 minutes with deionized water before pumping the cleanup solution over the column.
E. Pump the cleanup solution through th e column for 30-60 minutes
F. If the application eluent contains a solvent that is not compatible with the cleanup solution, rinse the column for 15
minutes with deionized water. Then pump the application eluent over the column.
G. Reconnect the AMMS III to the AS9-SC Analytical Column and place the guard column in line between the injection
valve and the analytical column if your system was originally configured with a guard column.
H. Equilibrate the column(s) with the application eluent before resuming normal operation.
It may not be necessary to use the above cleanup solution. You may find it more beneficial, depe nding on your sample
matrix, to use a 10X concentrate of your sodium carbonate/bicarbonate or sodium borate eluent. No te th at the
maximum solubility of sodium borate is 300 mM.
/75 mM NaHCO3 (see Section 4.1, Preparation of Eluent Concentrates) .
2CO3
CAUTION
/75 mM NaHCO3,
2CO3
NOTE
Page 32
IonPac AS9-SC Column Care Document No. 034656C06 Page 3 of 4
METAL CONTAMINANTS
WARNING
Do not use the standard HCl procedure described in other
DIONEX documentation for base cleanup of IonPac AS9-SC/AG9-SC Columns.
This procedure will destroy IonPac AS9-SC/AG9-SC Columns
A. Prepare a 500 mL cleanup solution of 100 mM oxalic acid/50 mM NaOH (pH 2.5 to 3.0) by dissolving 6.2 g of oxalic
acid dihydrate with 4.2 g (2.6 mL) of 50% w/w sodium hydroxide concentrate solution with 400 ml of deionized water
having a specific resistance of 18.2 megohm-cm. After thoroughly mixing, dilute to a final volume of 500 mL with
deionized water having a specific resistance of 18.2 megohm-cm.
B. Disconnect the anion suppressor from the IonPac AS9-SC Analytical Column. If your system is configured with both a
guard column and an an alytical column, reverse th e order of the guard and analytical column in the eluent flow path.
Double check that the eluent flows in the direction designated on each of the column labels. Direct the effluent from the
outlet line of the AS9-SC Guard Column to a separate waste container.
CAUTION
When cleaning an analytical column and a guard column in series, ensure that the guard column is placed after the
analytical column in the eluent flow path. Contaminants that have accumulated on the guard column can be eluted
onto the analytical column and irreversibly damage it. If in doubt, clean each column separately.
C. Set the pump flow rate to 1.0 mL/min.
D. If your eluent contains a solvent that is not compatible with the cleanup solution of 100 mM oxalic acid/50 mM NaOH,
rinse the column for 15 minutes with deionized water before pumping the cleanup solution over the column.
E. Pump the cleanup solution through th e column for 30-60 minutes
F. If the application eluent contains a solvent that is not compatible with the cleanup solution, rinse the column for 15
minutes with deionized water. Then pump the application eluent over the column.
G. Reconnect the AMMS III to the AS9-SC Analytical Column and place the guard column in line between the injection
valve and the analytical column if your system was originally configured with a guard column.
H. Equilibrate the column(s) with the application eluent before resuming normal operation.
Page 33
IonPac AS9-SC Column Care Document No. 034656C06 Page 4 of 4
ORGANIC CONTAMINANTS
A. Prepare a two bottles with approximately 500 mL each of the following two eluents. In the first bottle (E1) place 100%
acetonitrile. In the second bottle (E2) make a 1M solution of NaCl using deionized water having a specific resistance of
18.2 megohm-cm and then adjust the pH of the solution to pH 2.0 using HCl. Because acetonitrile slowly breaks down to
form ammonia and acetate in acidic aqueous solutions, the column cleaning solution (80% E1/20% E2) is created by
proportionally mixing these two eluents with the gradient pump which then isocratically pumps the resultin g cleaning
solution over the columns to be cleaned.
B. Disconnect the anion suppressor from the IonPac AS9-SC Analytical Column. If your system is configured with both a
guard column and an an alytical column, reverse th e order of the guard and analytical column in the eluent flow path.
Double check that the eluent flows in the direction designated on each of the column labels. Direct the effluent from the
outlet line of the AS9-SC Guard Column to a separate waste container.
CAUTION
When cleaning an analytical column and a guard column in series, ensure that the guard column is placed after the
analytical column in the eluent flow path. Contaminants that have accumulated on the guard column can be eluted
onto the analytical column and irreversibly damage it. If in doubt, clean each column separately.
C. Set the pump flow rate to 2.0 mL/min.
D. If the application eluent contains a salt that is not compatible with 80% acetonitrile, rinse the column for 10 minutes with
deionized water before pumping the cleaning solution over the column.
E. The cleaning solution is created by proportionally mixing 80% E1 plus 20% E2 with the gradient pump. Isocratically
pump this cleaning solution through the column for at least 60 minutes.
F. If the application contains a salt that is not compatible with 80% acetonitrile, rinse the column for 10 minutes with
deionized water before pumping the application eluent over the column.
G. Reconnect the anion suppressor to the AS9-SC Analytical Column and place the guard column in line between the
injection valve and the analytical column if your system was originally configured with a guard column.
H. Equilibrate the column(s) with the application eluent before resuming normal operation.
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